Tan0015870 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGA ATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGA ATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGA MGFESIPPVFGDFHFQPDSPPTCPLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG Homology
BLAST of Tan0015870 vs. NCBI nr
Match: KAA0060780.1 (ORF40s [Cucumis melo var. makuwa]) HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Tan0015870 vs. NCBI nr
Match: GFA98036.1 (ribosomal protein S10 [Tanacetum cinerariifolium]) HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of Tan0015870 vs. NCBI nr
Match: KAF5786086.1 (hypothetical protein HanXRQr2_Chr10g0436591 [Helianthus annuus]) HSP 1 Score: 136.0 bits (341), Expect = 1.9e-28 Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of Tan0015870 vs. NCBI nr
Match: PPR89027.1 (hypothetical protein GOBAR_AA31647 [Gossypium barbadense]) HSP 1 Score: 131.7 bits (330), Expect = 3.6e-27 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Tan0015870 vs. NCBI nr
Match: PPE01242.1 (hypothetical protein GOBAR_DD01736 [Gossypium barbadense]) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26 Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Tan0015870 vs. ExPASy TrEMBL
Match: A0A5A7V0C9 (ORF40s OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44334G00020 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 5.6e-50 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Tan0015870 vs. ExPASy TrEMBL
Match: A0A0A9RWP6 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32 Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Tan0015870 vs. ExPASy TrEMBL
Match: A0A2P5WD91 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31647 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Tan0015870 vs. ExPASy TrEMBL
Match: A0A446X8H3 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Av1G067250 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22 Identity = 57/73 (78.08%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Tan0015870 vs. ExPASy TrEMBL
Match: A0A2T7C7G7 (Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G274100 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.1e-16 Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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