Tan0015298 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTAGGCAGATTAATTTGTGTTTGAATTGGTCTATGTTAATCTAATAATAGGAAATTAAAATTGAAATGAAGAAATTAAAAAGGTGTTTGACGACCCTTCTCCTTCGTCTTCGCTAATTTTGTCTCTGTGTTTTTTTACAGAAGATCCAAGGCAGGCAACAAGAAACCCGTCATAGCCATGGAGAATCAGAGCACCTGCTTGTCCTACGAGAAGCTCAACGGCATGGCCACCTGGGTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGAAGAGGCTCACGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAACGACGTCGCTAATCTCCCCGTCTGACCGCCCGCTCTCCACGGATCTGAGGTCGTTTCCAAATTAGGTTTTCTTCTGATTTGTCGCGGGATCGGAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGAAATCTTCTTTTTGTTCTATGCTTTCCTTTTTCTATCCCTTTCCCTTGCTCTGGGATTGAGGATTTTGGGTTGAATTGCTTCTCTTCGTTTGTTGATATCTTTCATTTCTGTGAATTACAACTGGAATTGATATAATAAAAATTAGCCAGAAACAAGTTGATTCTTGTTGGTTCTGATCCGTATTTGAAGATTCATCCTTCATAAACTTAGATCATCTAATCTGGTTGGTTCTGACTGATATACGTTTTCTTGAAATTGCATGATTTTCTGCCGTCCTTGTCCATGAATCCTGAAGCAAAGTTCTTAAACCAATTACAATTCTTGAAAGAACCCAAATTGATTTGGGATCAAGATGAATGAATATGGTGTTGGTAACCATTGGATGGTATCAAAAGTCACCAATGCCCTGAGTTTTGTCTTGGTGGTGATTTAATAATAATAGGAACAATAATTTTTCCATTTTATATTGAAATTGTGCAGATCTGAGCTTTGTTTCTGCCATTTTTTGTTTATAAAATTTGTTGAGAGATATCTGACCGACCTTTCTTCTACCTTTTTCCTGATCTTGATTGCTTTGTCATAATGCAGATAATGATATGGGATGTCTAGGAGTTTGATAACATATTCTGAAATGATTAGAGGCAGATGGAAAGACAACATTCGTACTGTTTTGTCAATTTCATTTCATTTCATGATCTCAGACACAAAACAACTCATTTAAATGTTATTTTATGTCAACTGTAAATGGTTGTCTGAATTGGAATATAATATTTGATGAGGAAAGAGAGAAAAGGGATCTTCTTCTTCTCCAAACTCCAAACTCCAAAGCAGAATGAGTTGGAGAAAAGTACTGCCACAAAAGGAAAACAAGTGGCCAAACAAAAATGGACAAGATTTCTCAATATTTAAACTACATGAGTAGAACTTTGTTCTTTAGAATTAAATTTAAAAACTAAAGAGAGAGAAGAATGGAAGATGTTACATGTTTCTTTGTCTGCTTCTTTGGGATTTGGAATTTAGATCTTGAAGCCATAGTTTTTCTTTTTGTCAGTACAGCTAATTGATTCCAATCATTTTTCTTCTGATGCAGAGCAGGAACATGGCCACACAGCTTGGTTACCAGAAAGCTTTAACAGAAATGGCAGAACAAAGCAGGGGAACAAGGAAACTGCAAATATTCACTATTTAAATACCACAATTTAATGTAGAAAGAATATTTAGATTATCTTCACACATAGACAAGTGAAGGGCAGCTCTTTTTCTTTATTCTTTTTAACGTTGTAATGTTGTAATCTTGGTTTCTTAATTGTCAAGTCCTGCAAAAGTAAATGTATAAAAATAATTTGAATATGATCAAATCCATTTCATTCACAATCCAATCATCAACATCAAATTCAAATA GATTAGGCAGATTAATTTGTGTTTGAATTGGTCTATGTTAATCTAATAATAGGAAATTAAAATTGAAATGAAGAAATTAAAAAGGTGTTTGACGACCCTTCTCCTTCGTCTTCGCTAATTTTGTCTCTGTGTTTTTTTACAGAAGATCCAAGGCAGGCAACAAGAAACCCGTCATAGCCATGGAGAATCAGAGCACCTGCTTGTCCTACGAGAAGCTCAACGGCATGGCCACCTGGGTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGAAGAGGCTCACGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAACGACGTCGCTAATCTCCCCGTCTGACCGCCCGCTCTCCACGGATCTGAGAGCAGGAACATGGCCACACAGCTTGGTTACCAGAAAGCTTTAACAGAAATGGCAGAACAAAGCAGGGGAACAAGGAAACTGCAAATATTCACTATTTAAATACCACAATTTAATGTAGAAAGAATATTTAGATTATCTTCACACATAGACAAGTGAAGGGCAGCTCTTTTTCTTTATTCTTTTTAACGTTGTAATGTTGTAATCTTGGTTTCTTAATTGTCAAGTCCTGCAAAAGTAAATGTATAAAAATAATTTGAATATGATCAAATCCATTTCATTCACAATCCAATCATCAACATCAAATTCAAATA ATGGAGAATCAGAGCACCTGCTTGTCCTACGAGAAGCTCAACGGCATGGCCACCTGGGTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGAAGAGGCTCACGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAACGACGTCGCTAATCTCCCCGTCTGA MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV Homology
BLAST of Tan0015298 vs. NCBI nr
Match: XP_011654597.1 (uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654598.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654599.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654600.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_031742147.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >KAE8647797.1 hypothetical protein Csa_000040 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Tan0015298 vs. NCBI nr
Match: XP_031742148.1 (uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Tan0015298 vs. NCBI nr
Match: XP_008437637.1 (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437639.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437640.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo]) HSP 1 Score: 174.1 bits (440), Expect = 5.2e-40 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Tan0015298 vs. NCBI nr
Match: XP_022922222.1 (uncharacterized protein LOC111430272 [Cucurbita moschata] >XP_022922223.1 uncharacterized protein LOC111430272 [Cucurbita moschata]) HSP 1 Score: 173.7 bits (439), Expect = 6.8e-40 Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Tan0015298 vs. NCBI nr
Match: KAG7016815.1 (hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 173.3 bits (438), Expect = 8.9e-40 Identity = 82/86 (95.35%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Tan0015298 vs. ExPASy TrEMBL
Match: A0A0A0KLU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Tan0015298 vs. ExPASy TrEMBL
Match: A0A1S3AU63 (uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Tan0015298 vs. ExPASy TrEMBL
Match: A0A6J1E5Z9 (uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC111430272 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40 Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Tan0015298 vs. ExPASy TrEMBL
Match: A0A6J1ID63 (uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.6e-40 Identity = 81/86 (94.19%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Tan0015298 vs. ExPASy TrEMBL
Match: A0A6J1C970 (uncharacterized protein LOC111009130 OS=Momordica charantia OX=3673 GN=LOC111009130 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.6e-40 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Tan0015298 vs. TAIR 10
Match: AT4G10810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 6.9e-14 Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Tan0015298 vs. TAIR 10
Match: AT4G24026.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 8.4e-12 Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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