Tan0013196 (gene) Snake gourd v1

Overview


Name	Tan0013196
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Location	LG02: 90876212 .. 90878701 (+)
RNA-Seq Expression	Tan0013196
Synteny	Tan0013196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGACTTATTGACCCAAGAATTTAAGATTAAAAAAAGTAGAACCCAAAAAATATTTTCCCAATTGATATAGTTTGAATTCAATTAGGTATTACCAAAAGAGATTTCTTTTATTTTATTTTTAATATTCACATTATTTAATTCAAGAAGAAAGCATAATTACAGAAAATGATGGCTTTTCATTATATTTTGGAGTAATTTTGAAAAAGGGGAAACCCAACTGCTCAAGTTGAATTAAAGTAGTGGAAAGAAGCAAGAACAACAATTTTCAAATTTTTTTGTTTAATTTTTTTTAAAAAAATTTACAGAGAAATTCGGAAAAGGAGAAAGAAAACATCCCTCTCTCAGACGGCGTTGCCCCTTCCTAATCGGCACTCGCCGGAGGAGTAAACCGCTCTTTCTTTTTCCTTGTGCTTTTTCCCCAATCACAAAAGCCGATAGCAAAAGCGCTTTTGATTAAAGCAGCCCAAAAGAGCTTCTTCTTCTTCTAATCAAAGCTGAAGAAGAACCAATTCTTCAATCTTCATAGGTTGCTTTCTGTGGTTGTTTTGGTGAAAACAACTTCGTGGGGGATTCGAAGAAACCCGAACCACCAAATTTCTCTTCTGGGTTTTCTGTAAACACGTTCTCGAAGAAAAGAATTTCGTGGGTATATTATTTTTGGGGTTTTCGATTGAAAGAGAGAGATACAATTTGTCGGATTATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGTGCCAATGCTCTGTTAGTATCCATTTTCCGTTTTCCCTTCACTGTTTATCTTCTCTGTTCATAGAAATTTTGATCGGTTTACTAGTTTTGATGAAAGTATGGTGGGAAGTTTCTGTAATCTGTTTGTTTATCTGATTTTTCCCAACTCTGGTTTCTGGGTTTGCAGGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTTTCTCTTTTCTTGACTTGTTTAATGTTGCCTGATTTCTTTGTTTTGCTGTTTATATGTATCTGAGTTTGGTCTGTCATATGATGTTTGTTATTTGCTTTGTTCAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGGTACATTTTTTTTGCCTTATAAGAGTGTTTTGGAGTTTGCTTTCAAAATAGTTCTATAATGGCATGTACAAAACTGTTTTTAAGGACTGCAATTGGGCAGTTATGGTTTTAGTGCAGTTAAAACACTTCACATACATCCATGATTATAGGAGGATGAACATGAGTTGTTCTAAAAACAGAGAGAATGTAGTTATTTGAACATGTTTTTGCTAAATGTCTTGTACTTTCTCGGGCCTAACTAAGGAAATAGGATAGGTGAAGAAGGGAAAAAACAAATAAGACTTTAAGCCAAGCTATTTCATTTAAGTCTAGGACATAGGCAGGACTTCTCAATCGAGCAGTTAGGAAGTAGTTAAATCACATCTTCCACTTCTCACTTTTGTCTCTTGTTTGAAATCATTAGGCTTGGTTTTTTGTGGGGTTTTTTGTGGTGTTGATATTGTATAATTTGGAGTTTATGACAAGACTTCTCAATGGAACAGTTAGGAAGTAGTTAAATCACATTTCCCATCTCTCCTTCTGCCTCTTGTTTGAAATCATTAGGCATAGTTTTTTGTGGTGTTGATATTGTATGAATCGAAGTTTATGACATTGTTTTGTTTCCAACAAACTTTCTACTTCAGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGTAACTACAAACTTCATAGATCGTCTCTTTCCCGTTCTGGGTTCGATTGCTTTAACGCCTTTGCTCTTGAATGATTTGTAGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAACCAAAAATAAACCAATTTCTGTACAGATAATTTGAAAGCCGACCGTTAAATGTAAACAGAGT

mRNA sequence

TTTGACTTATTGACCCAAGAATTTAAGATTAAAAAAAGTAGAACCCAAAAAATATTTTCCCAATTGATATAGTTTGAATTCAATTAGGTATTACCAAAAGAGATTTCTTTTATTTTATTTTTAATATTCACATTATTTAATTCAAGAAGAAAGCATAATTACAGAAAATGATGGCTTTTCATTATATTTTGGAGTAATTTTGAAAAAGGGGAAACCCAACTGCTCAAGTTGAATTAAAGTAGTGGAAAGAAGCAAGAACAACAATTTTCAAATTTTTTTGTTTAATTTTTTTTAAAAAAATTTACAGAGAAATTCGGAAAAGGAGAAAGAAAACATCCCTCTCTCAGACGGCGTTGCCCCTTCCTAATCGGCACTCGCCGGAGGAGTAAACCGCTCTTTCTTTTTCCTTGTGCTTTTTCCCCAATCACAAAAGCCGATAGCAAAAGCGCTTTTGATTAAAGCAGCCCAAAAGAGCTTCTTCTTCTTCTAATCAAAGCTGAAGAAGAACCAATTCTTCAATCTTCATAGGTTGCTTTCTGTGGTTGTTTTGGTGAAAACAACTTCGTGGGGGATTCGAAGAAACCCGAACCACCAAATTTCTCTTCTGGGTTTTCTGTAAACACGTTCTCGAAGAAAAGAATTTCGTGGGTATATTATTTTTGGGGTTTTCGATTGAAAGAGAGAGATACAATTTGTCGGATTATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGTGCCAATGCTCTGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAACCAAAAATAAACCAATTTCTGTACAGATAATTTGAAAGCCGACCGTTAAATGTAAACAGAGT

Coding sequence (CDS)

ATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGTGCCAATGCTCTGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

Protein sequence

MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI

Homology

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BLAST of Tan0013196 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.6e-58
Identity = 111/240 (46.25%), Postives = 146/240 (60.83%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTC 66
           R S KDSLK LE D+  AN LA+  P    G Y+QM+L Y+  A LFLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  ILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEK 126
                L    IL+YK Y DG+  +S H RK ++++FY V+ PSL +L     +++  K+K
Sbjct: 62  -FAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 127 RVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRS 186
            +      ++     GK+S  DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 187 ESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVY 246
           +SCPFCRGSLKR+ S DLW+ TCS ++ D   + +E+L R  +YI  LP    D   + Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Tan0013196 vs. NCBI nr
Match: XP_008444404.1 (PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo])

HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133
Identity = 234/251 (93.23%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA+ EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           DNAKEK  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH
Sbjct: 121 DNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. NCBI nr
Match: XP_038885383.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 483.8 bits (1244), Expect = 9.0e-133
Identity = 234/251 (93.23%), Postives = 241/251 (96.02%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+RSSCKDSLKVLEEDV  ANALAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLARSSCKDSLKVLEEDVQHANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPR LNFFHILVYKVYTDGRP+ISAHGRKATVKDFYAVILPSLQRLQA+ EE 
Sbjct: 61  DCSCTCILPRNLNFFHILVYKVYTDGRPSISAHGRKATVKDFYAVILPSLQRLQANAEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           DNAKEKRVK  N SE+RVQGDGKLS GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH
Sbjct: 121 DNAKEKRVKSGNSSEKRVQGDGKLSKGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWNTRSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. NCBI nr
Match: XP_004142955.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical protein Csa_018738 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 5.8e-132
Identity = 231/251 (92.03%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RAN LAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA  EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           D+AK+K  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH
Sbjct: 121 DSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. NCBI nr
Match: KAA0061039.1 (hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa])

HSP 1 Score: 480.7 bits (1236), Expect = 7.6e-132
Identity = 234/255 (91.76%), Postives = 240/255 (94.12%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYK----VYTDGRPNISAHGRKATVKDFYAVILPSLQRLQAS 120
           DCSCTCILPRYLNFFHILVYK    VYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA+
Sbjct: 61  DCSCTCILPRYLNFFHILVYKAGLSVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQAN 120

Query: 121 TEELDNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI 180
            EE DNAKEK  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI
Sbjct: 121 VEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI 180

Query: 181 KCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPK 240
           KCYHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPK
Sbjct: 181 KCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPK 240

Query: 241 EYPDALFLVYYEYLI 252
           EYPDALFLVYYEYLI
Sbjct: 241 EYPDALFLVYYEYLI 255

[Close]

BLAST of Tan0013196 vs. NCBI nr
Match: ACA50446.1 (putative protein-binding/zinc ion-binding protein [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 230/251 (91.63%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RAN LAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA  EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           D+AK+K  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKM LPNCCHSMCIKCYH
Sbjct: 121 DSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMALPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.7e-134
Identity = 234/251 (93.23%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA+ EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           DNAKEK  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH
Sbjct: 121 DNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. ExPASy TrEMBL
Match: A0A0A0LMV8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132
Identity = 231/251 (92.03%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RAN LAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA  EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           D+AK+K  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH
Sbjct: 121 DSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. ExPASy TrEMBL
Match: A0A5A7V5Q1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001750 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132
Identity = 234/255 (91.76%), Postives = 240/255 (94.12%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYK----VYTDGRPNISAHGRKATVKDFYAVILPSLQRLQAS 120
           DCSCTCILPRYLNFFHILVYK    VYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA+
Sbjct: 61  DCSCTCILPRYLNFFHILVYKAGLSVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQAN 120

Query: 121 TEELDNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI 180
            EE DNAKEK  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI
Sbjct: 121 VEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI 180

Query: 181 KCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPK 240
           KCYHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPK
Sbjct: 181 KCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPK 240

Query: 241 EYPDALFLVYYEYLI 252
           EYPDALFLVYYEYLI
Sbjct: 241 EYPDALFLVYYEYLI 255

[Close]

BLAST of Tan0013196 vs. ExPASy TrEMBL
Match: B7SHK9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.2e-132
Identity = 230/251 (91.63%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RAN LAAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQA  EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIEEF 120

Query: 121 DNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180
           D+AK+K  K DN SERR+QGDGKLSNGDLEREDECGICLEPSTKM LPNCCHSMCIKCYH
Sbjct: 121 DSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMALPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 252
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Tan0013196 vs. ExPASy TrEMBL
Match: A0A6J1BQ55 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.2e-132
Identity = 230/253 (90.91%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MYYRLSR--SSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQ 60
           MYYRL+R  SSCKDS+KVLEEDV RANALAAAIPRAKHGSYLQMKLVYN LAPLFLFLMQ
Sbjct: 1   MYYRLTRSSSSCKDSMKVLEEDVQRANALAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQ 60

Query: 61  WVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTE 120
           WVDCSCTCILPRYLNFFHIL+YKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQA+ +
Sbjct: 61  WVDCSCTCILPRYLNFFHILIYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANVD 120

Query: 121 ELDNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           ELD+A ++RVK DN +++R QGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 ELDSAIDRRVKADNSNDKRAQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEY 240
           YHNWNTRSESCPFCRGSL+RIKSEDLWVLTCSEDVVDAEKVS+EDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNTRSESCPFCRGSLRRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 252
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 253

[Close]

BLAST of Tan0013196 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 328.2 bits (840), Expect = 5.9e-90
Identity = 160/256 (62.50%), Postives = 200/256 (78.12%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWV 60
           MYY+L++SS +DSLK+LE D+  AN LAA IP  K G  LQMKLV + LAP F+FL+QW+
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEEL 120
           D S  C+LPRY +FFHIL+YKV  DGR N S +GRKAT+++FY VILPSL+RL  +  +L
Sbjct: 61  DFS--CLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADL 120

Query: 121 DNAKEKRVKFDNP-----SERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMC 180
               ++ + + NP      +  ++G   +++ DLEREDECGICLEP TKMVLPNCCH+MC
Sbjct: 121 ---PDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMC 180

Query: 181 IKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLP 240
           IKCY NWNT+SESCPFCRGS+KR+ SEDLWVLTC EDVVD E V++EDL RFYL+I+SLP
Sbjct: 181 IKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLP 240

Query: 241 KEYPDALFLVYYEYLI 252
           K+YP+A FLVY EYLI
Sbjct: 241 KDYPEAAFLVYNEYLI 251

[Close]

BLAST of Tan0013196 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 309.3 bits (791), Expect = 2.8e-84
Identity = 151/248 (60.89%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 6   SRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCT 65
           S SS  +SLKVLE DV  AN+LA AIP  K+   LQMKLV++  A L LFL++W+D S +
Sbjct: 12  SSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSS 71

Query: 66  CILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNA-- 125
           C++PRYLN FH+LVYKV +DG+P ++ HGRKAT+ +FY VILPSLQ L ++ +EL+    
Sbjct: 72  CLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDI 131

Query: 126 --KEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHN 185
               KR+      E R     + SN  LERE+ECGICLE  TKMVLPNCCHSMCIKCY N
Sbjct: 132 GFDLKRLSKKITKEAR---SSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRN 191

Query: 186 WNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDA 245
           WN +S+SCPFCRGS+KR+ SEDLWVL    DVVD    SREDL RFYLYI+SLPK+YP+A
Sbjct: 192 WNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEA 251

Query: 246 LFLVYYEY 250
           LF+VYYEY
Sbjct: 252 LFVVYYEY 256

[Close]

BLAST of Tan0013196 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75
Identity = 133/219 (60.73%), Postives = 164/219 (74.89%), Query Frame = 0


Query: 35  KHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHG 94
           K+   LQMKLV++  A L LFL++W+D S +C++PRYLN FH+LVYKV +DG+P ++ HG
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 95  RKATVKDFYAVILPSLQRLQASTEELDNA----KEKRVKFDNPSERRVQGDGKLSNGDLE 154
           RKAT+ +FY VILPSLQ L ++ +EL+        KR+      E R     + SN  LE
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SSRFSNAGLE 122

Query: 155 REDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCS 214
           RE+ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL   
Sbjct: 123 REEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGD 182

Query: 215 EDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEY 250
            DVVD    SREDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 183 NDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Tan0013196 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-59
Identity = 111/240 (46.25%), Postives = 146/240 (60.83%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTC 66
           R S KDSLK LE D+  AN LA+  P    G Y+QM+L Y+  A LFLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  ILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEK 126
                L    IL+YK Y DG+  +S H RK ++++FY V+ PSL +L     +++  K+K
Sbjct: 62  -FAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 127 RVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRS 186
            +      ++     GK+S  DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 187 ESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVY 246
           +SCPFCRGSLKR+ S DLW+ TCS ++ D   + +E+L R  +YI  LP    D   + Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Tan0013196 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 225.3 bits (573), Expect = 5.4e-59
Identity = 107/239 (44.77%), Postives = 156/239 (65.27%), Query Frame = 0


Query: 5   LSRSSCKDSLKVLEEDVNRANALAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSC 64
           +++ S KDSLK LE D+  AN LA   PR K G+ +QM+L Y+  A  FLFL+QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK- 60

Query: 65  TCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAK 124
              L  +L    +L+Y  Y DG+  +S + RKA++++F AVILPSL +LQ    ++D++K
Sbjct: 61  ---LAGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSK 120

Query: 125 EKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNT 184
           +K V        R + + ++S  ++ERE+ECGIC+E ++K+VLPNC HS+CIKCY +W  
Sbjct: 121 QKEV---CKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRG 180

Query: 185 RSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALF 244
           RS+SCPFCR SLKR+ S DLW+     D V+   ++RE+  R ++YI  LP   PD ++
Sbjct: 181 RSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

The following BLAST results are available for this feature:

BLAST of Tan0013196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.6e-58	46.25	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]

BLAST of Tan0013196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444404.1	1.4e-133	93.23	PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]	[more]
XP_038885383.1	9.0e-133	93.23	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida]	[more]
XP_004142955.1	5.8e-132	92.03	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical pro...	[more]
KAA0061039.1	7.6e-132	91.76	hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa]	[more]
ACA50446.1	1.7e-131	91.63	putative protein-binding/zinc ion-binding protein [Cucumis sativus]	[more]

BLAST of Tan0013196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB06	6.7e-134	93.23	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A0A0LMV8	2.8e-132	92.03	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 P...	[more]
A0A5A7V5Q1	3.7e-132	91.76	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
B7SHK9	8.2e-132	91.63	RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A6J1BQ55	8.2e-132	90.91	RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624...	[more]

BLAST of Tan0013196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	5.9e-90	62.50	RING/U-box superfamily protein	[more]
AT1G13195.1	2.8e-84	60.89	RING/U-box superfamily protein	[more]
AT1G13195.2	1.4e-75	60.73	RING/U-box superfamily protein	[more]
AT5G01520.1	1.8e-59	46.25	RING/U-box superfamily protein	[more]
AT5G58787.1	5.4e-59	44.77	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..166 e-value: 9.9E-5 score: 31.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 127..167 e-value: 6.3E-8 score: 32.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..167 score: 11.751628
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 94..178 e-value: 2.0E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..117
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 1..225
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..225
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 122..173
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 144..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013196.1	Tan0013196.1	mRNA
Tan0013196.2	Tan0013196.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity