Tan0013196.2 (mRNA) Snake gourd v1

Overview


Name	Tan0013196.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Location	LG02: 90876212 .. 90878701 (+)
Sequence length	1501
RNA-Seq Expression	Tan0013196.2
Synteny	Tan0013196.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGACTTATTGACCCAAGAATTTAAGATTAAAAAAAGTAGAACCCAAAAAATATTTTCCCAATTGATATAGTTTGAATTCAATTAGGTATTACCAAAAGAGATTTCTTTTATTTTATTTTTAATATTCACATTATTTAATTCAAGAAGAAAGCATAATTACAGAAAATGATGGCTTTTCATTATATTTTGGAGTAATTTTGAAAAAGGGGAAACCCAACTGCTCAAGTTGAATTAAAGTAGTGGAAAGAAGCAAGAACAACAATTTTCAAATTTTTTTGTTTAATTTTTTTTAAAAAAATTTACAGAGAAATTCGGAAAAGGAGAAAGAAAACATCCCTCTCTCAGACGGCGTTGCCCCTTCCTAATCGGCACTCGCCGGAGGAGTAAACCGCTCTTTCTTTTTCCTTGTGCTTTTTCCCCAATCACAAAAGCCGATAGCAAAAGCGCTTTTGATTAAAGCAGCCCAAAAGAGCTTCTTCTTCTTCTAATCAAAGCTGAAGAAGAACCAATTCTTCAATCTTCATAGGTTGCTTTCTGTGGTTGTTTTGGTGAAAACAACTTCGTGGGGGATTCGAAGAAACCCGAACCACCAAATTTCTCTTCTGGGTTTTCTGTAAACACGTTCTCGAAGAAAAGAATTTCGTGGGTATATTATTTTTGGGGTTTTCGATTGAAAGAGAGAGATACAATTTGTCGGATTATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGTGCCAATGCTCTGTTAGTATCCATTTTCCGTTTTCCCTTCACTGTTTATCTTCTCTGTTCATAGAAATTTTGATCGGTTTACTAGTTTTGATGAAAGTATGGTGGGAAGTTTCTGTAATCTGTTTGTTTATCTGATTTTTCCCAACTCTGGTTTCTGGGTTTGCAGGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTTTCTCTTTTCTTGACTTGTTTAATGTTGCCTGATTTCTTTGTTTTGCTGTTTATATGTATCTGAGTTTGGTCTGTCATATGATGTTTGTTATTTGCTTTGTTCAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGGTACATTTTTTTTGCCTTATAAGAGTGTTTTGGAGTTTGCTTTCAAAATAGTTCTATAATGGCATGTACAAAACTGTTTTTAAGGACTGCAATTGGGCAGTTATGGTTTTAGTGCAGTTAAAACACTTCACATACATCCATGATTATAGGAGGATGAACATGAGTTGTTCTAAAAACAGAGAGAATGTAGTTATTTGAACATGTTTTTGCTAAATGTCTTGTACTTTCTCGGGCCTAACTAAGGAAATAGGATAGGTGAAGAAGGGAAAAAACAAATAAGACTTTAAGCCAAGCTATTTCATTTAAGTCTAGGACATAGGCAGGACTTCTCAATCGAGCAGTTAGGAAGTAGTTAAATCACATCTTCCACTTCTCACTTTTGTCTCTTGTTTGAAATCATTAGGCTTGGTTTTTTGTGGGGTTTTTTGTGGTGTTGATATTGTATAATTTGGAGTTTATGACAAGACTTCTCAATGGAACAGTTAGGAAGTAGTTAAATCACATTTCCCATCTCTCCTTCTGCCTCTTGTTTGAAATCATTAGGCATAGTTTTTTGTGGTGTTGATATTGTATGAATCGAAGTTTATGACATTGTTTTGTTTCCAACAAACTTTCTACTTCAGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGTAACTACAAACTTCATAGATCGTCTCTTTCCCGTTCTGGGTTCGATTGCTTTAACGCCTTTGCTCTTGAATGATTTGTAGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAACCAAAAATAAACCAATTTCTGTACAGATAATTTGAAAGCCGACCGTTAAATGTAAACAGAGT

mRNA sequence

TTTGACTTATTGACCCAAGAATTTAAGATTAAAAAAAGTAGAACCCAAAAAATATTTTCCCAATTGATATAGTTTGAATTCAATTAGGTATTACCAAAAGAGATTTCTTTTATTTTATTTTTAATATTCACATTATTTAATTCAAGAAGAAAGCATAATTACAGAAAATGATGGCTTTTCATTATATTTTGGAGTAATTTTGAAAAAGGGGAAACCCAACTGCTCAAGTTGAATTAAAGTAGTGGAAAGAAGCAAGAACAACAATTTTCAAATTTTTTTGTTTAATTTTTTTTAAAAAAATTTACAGAGAAATTCGGAAAAGGAGAAAGAAAACATCCCTCTCTCAGACGGCGTTGCCCCTTCCTAATCGGCACTCGCCGGAGGAGTAAACCGCTCTTTCTTTTTCCTTGTGCTTTTTCCCCAATCACAAAAGCCGATAGCAAAAGCGCTTTTGATTAAAGCAGCCCAAAAGAGCTTCTTCTTCTTCTAATCAAAGCTGAAGAAGAACCAATTCTTCAATCTTCATAGGTTGCTTTCTGTGGTTGTTTTGGTGAAAACAACTTCGTGGGGGATTCGAAGAAACCCGAACCACCAAATTTCTCTTCTGGGTTTTCTGTAAACACGTTCTCGAAGAAAAGAATTTCGTGGGTATATTATTTTTGGGGTTTTCGATTGAAAGAGAGAGATACAATTTGTCGGATTATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGAACCAAAAATAAACCAATTTCTGTACAGATAATTTGAAAGCCGACCGTTAAATGTAAACAGAGT

Coding sequence (CDS)

ATGGCTGCAGCCATTCCAAGAGCCAAACATGGTTCATATCTTCAGATGAAATTGGTTTACAATCAATTGGCTCCACTCTTTCTGTTTTTAATGCAATGGGTGGATTGTTCTTGCACTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTGTACACAGATGGAAGACCTAACATATCAGCACATGGAAGAAAGGCAACTGTCAAAGATTTTTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAGCACCGAGGAGTTGGATAATGCTAAAGAGAAGCGGGTCAAGTTCGATAATCCGAGCGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATGGTGATCTAGAGAGAGAAGATGAATGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCAGAATCGTGCCCATTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAGGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

Protein sequence

MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI

Homology

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BLAST of Tan0013196.2 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.5e-52
Identity = 98/220 (44.55%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +A+  P    G Y+QM+L Y+  A LFLFL+QW DC         L    IL+YK Y DG
Sbjct: 22  LASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----FAGALGLLRILIYKAYVDG 81

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           +  +S H RK ++++FY V+ PSL +L     +++  K+K +      ++     GK+S 
Sbjct: 82  KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSE 141

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
            DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS+SCPFCRGSLKR+ S DLW+
Sbjct: 142 IDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWI 201

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVY 221
            TCS ++ D   + +E+L R  +YI  LP    D   + Y
Sbjct: 202 YTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

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BLAST of Tan0013196.2 vs. NCBI nr
Match: XP_008444404.1 (PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 9.2e-121
Identity = 211/225 (93.78%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA+ EE DNAKEK  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

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BLAST of Tan0013196.2 vs. NCBI nr
Match: XP_004142955.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical protein Csa_018738 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 209/225 (92.89%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA  EE D+AK+K  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

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BLAST of Tan0013196.2 vs. NCBI nr
Match: XP_038885383.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 210/225 (93.33%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPR LNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRNLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RP+ISAHGRKATVKDFYAVILPSLQRLQA+ EE DNAKEKRVK  N SE+RVQGDGKLS 
Sbjct: 87  RPSISAHGRKATVKDFYAVILPSLQRLQANAEEFDNAKEKRVKSGNSSEKRVQGDGKLSK 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Tan0013196.2 vs. NCBI nr
Match: ACA50446.1 (putative protein-binding/zinc ion-binding protein [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 5.1e-119
Identity = 208/225 (92.44%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA  EE D+AK+K  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKM LPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMALPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Tan0013196.2 vs. NCBI nr
Match: XP_022131399.1 (RING-H2 finger protein ATL47-like [Momordica charantia])

HSP 1 Score: 438.0 bits (1125), Expect = 5.1e-119
Identity = 206/225 (91.56%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYN LAPLFLFLMQWVDCSCTCILPRYLNFFHIL+YKVYTDG
Sbjct: 29  LAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQWVDCSCTCILPRYLNFFHILIYKVYTDG 88

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKAT+KDFYAVILPSLQRLQA+ +ELD+A ++RVK DN +++R QGDGKLSN
Sbjct: 89  RPNISAHGRKATIKDFYAVILPSLQRLQANVDELDSAIDRRVKADNSNDKRAQGDGKLSN 148

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSL+RIKSEDLWV
Sbjct: 149 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLRRIKSEDLWV 208

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTCSEDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 209 LTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 253

[Close]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.5e-121
Identity = 211/225 (93.78%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA+ EE DNAKEK  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL
Match: A0A0A0LMV8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.4e-120
Identity = 209/225 (92.89%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA  EE D+AK+K  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL
Match: A0A5A7V5Q1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001750 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 211/229 (92.14%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYK----V 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYK    V
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKAGLSV 86

Query: 61  YTDGRPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDG 120
           YTDGRPNISAHGRKATVKDFYAVILPSLQRLQA+ EE DNAKEK  K DN SERR+QGDG
Sbjct: 87  YTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEFDNAKEKHAKSDNSSERRIQGDG 146

Query: 121 KLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSE 180
           KLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSE
Sbjct: 147 KLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSE 206

Query: 181 DLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           DLWVLTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 DLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 255

[Close]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL
Match: B7SHK9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 208/225 (92.44%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYNQLAP FLFLMQW+DCSCTCILPRYLNFFHILVYKVYTDG
Sbjct: 27  LAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWLDCSCTCILPRYLNFFHILVYKVYTDG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKATVKDFYAVILPSLQRLQA  EE D+AK+K  K DN SERR+QGDGKLSN
Sbjct: 87  RPNISAHGRKATVKDFYAVILPSLQRLQADIEEFDSAKKKHAKSDNSSERRIQGDGKLSN 146

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKM LPNCCHSMCIKCYHNWN RSESCPFCRGSLKRIKSEDLWV
Sbjct: 147 GDLEREDECGICLEPSTKMALPNCCHSMCIKCYHNWNMRSESCPFCRGSLKRIKSEDLWV 206

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTC+EDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 207 LTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 251

[Close]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL
Match: A0A6J1BQ55 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 206/225 (91.56%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AAAIPRAKHGSYLQMKLVYN LAPLFLFLMQWVDCSCTCILPRYLNFFHIL+YKVYTDG
Sbjct: 29  LAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQWVDCSCTCILPRYLNFFHILIYKVYTDG 88

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           RPNISAHGRKAT+KDFYAVILPSLQRLQA+ +ELD+A ++RVK DN +++R QGDGKLSN
Sbjct: 89  RPNISAHGRKATIKDFYAVILPSLQRLQANVDELDSAIDRRVKADNSNDKRAQGDGKLSN 148

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
           GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSL+RIKSEDLWV
Sbjct: 149 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLRRIKSEDLWV 208

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           LTCSEDVVDAEKVS+EDLSRFYLYISSLPKEYPDALFLVYYEYLI
Sbjct: 209 LTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI 253

[Close]

BLAST of Tan0013196.2 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80
Identity = 144/230 (62.61%), Postives = 179/230 (77.83%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +AA IP  K G  LQMKLV + LAP F+FL+QW+D S  C+LPRY +FFHIL+YKV  DG
Sbjct: 27  LAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFS--CLLPRYFDFFHILIYKVRADG 86

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNP-----SERRVQGD 120
           R N S +GRKAT+++FY VILPSL+RL  +  +L    ++ + + NP      +  ++G 
Sbjct: 87  RWNRSRYGRKATIREFYGVILPSLERLHINFADL---PDESLWYPNPKAITKKQYDIEGS 146

Query: 121 GKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKS 180
             +++ DLEREDECGICLEP TKMVLPNCCH+MCIKCY NWNT+SESCPFCRGS+KR+ S
Sbjct: 147 RYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKRVNS 206

Query: 181 EDLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEYLI 226
           EDLWVLTC EDVVD E V++EDL RFYL+I+SLPK+YP+A FLVY EYLI
Sbjct: 207 EDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEYLI 251

[Close]

BLAST of Tan0013196.2 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.0e-77
Identity = 137/227 (60.35%), Postives = 169/227 (74.45%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +A AIP  K+   LQMKLV++  A L LFL++W+D S +C++PRYLN FH+LVYKV +DG
Sbjct: 33  LAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDG 92

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNA----KEKRVKFDNPSERRVQGDG 120
           +P ++ HGRKAT+ +FY VILPSLQ L ++ +EL+        KR+      E R     
Sbjct: 93  QPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SS 152

Query: 121 KLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSE 180
           + SN  LERE+ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SE
Sbjct: 153 RFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSE 212

Query: 181 DLWVLTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEY 224
           DLWVL    DVVD    SREDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 213 DLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 256

[Close]

BLAST of Tan0013196.2 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75
Identity = 133/219 (60.73%), Postives = 164/219 (74.89%), Query Frame = 0


Query: 9   KHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHG 68
           K+   LQMKLV++  A L LFL++W+D S +C++PRYLN FH+LVYKV +DG+P ++ HG
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 69  RKATVKDFYAVILPSLQRLQASTEELDNA----KEKRVKFDNPSERRVQGDGKLSNGDLE 128
           RKAT+ +FY VILPSLQ L ++ +EL+        KR+      E R     + SN  LE
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SSRFSNAGLE 122

Query: 129 REDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCS 188
           RE+ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL   
Sbjct: 123 REEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGD 182

Query: 189 EDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVYYEY 224
            DVVD    SREDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 183 NDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Tan0013196.2 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 6.7e-53
Identity = 98/220 (44.55%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +A+  P    G Y+QM+L Y+  A LFLFL+QW DC         L    IL+YK Y DG
Sbjct: 22  LASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----FAGALGLLRILIYKAYVDG 81

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           +  +S H RK ++++FY V+ PSL +L     +++  K+K +      ++     GK+S 
Sbjct: 82  KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSE 141

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
            DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS+SCPFCRGSLKR+ S DLW+
Sbjct: 142 IDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWI 201

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALFLVY 221
            TCS ++ D   + +E+L R  +YI  LP    D   + Y
Sbjct: 202 YTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Tan0013196.2 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-52
Identity = 95/217 (43.78%), Postives = 141/217 (64.98%), Query Frame = 0


Query: 1   MAAAIPRAKHGSYLQMKLVYNQLAPLFLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDG 60
           +A   PR K G+ +QM+L Y+  A  FLFL+QW DC     L  +L    +L+Y  Y DG
Sbjct: 23  LALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK----LAGFLGLLRVLIYMTYADG 82

Query: 61  RPNISAHGRKATVKDFYAVILPSLQRLQASTEELDNAKEKRVKFDNPSERRVQGDGKLSN 120
           +  +S + RKA++++F AVILPSL +LQ    ++D++K+K V        R + + ++S 
Sbjct: 83  KTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV---CKMRYRKKDESEMSE 142

Query: 121 GDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWV 180
            ++ERE+ECGIC+E ++K+VLPNC HS+CIKCY +W  RS+SCPFCR SLKR+ S DLW+
Sbjct: 143 IEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLWM 202

Query: 181 LTCSEDVVDAEKVSREDLSRFYLYISSLPKEYPDALF 218
                D V+   ++RE+  R ++YI  LP   PD ++
Sbjct: 203 FLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

The following BLAST results are available for this feature:

BLAST of Tan0013196.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	9.5e-52	44.55	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]

BLAST of Tan0013196.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444404.1	9.2e-121	93.78	PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]	[more]
XP_004142955.1	1.7e-119	92.89	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical pro...	[more]
XP_038885383.1	3.9e-119	93.33	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida]	[more]
ACA50446.1	5.1e-119	92.44	putative protein-binding/zinc ion-binding protein [Cucumis sativus]	[more]
XP_022131399.1	5.1e-119	91.56	RING-H2 finger protein ATL47-like [Momordica charantia]	[more]

BLAST of Tan0013196.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB06	4.5e-121	93.78	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A0A0LMV8	8.4e-120	92.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 P...	[more]
A0A5A7V5Q1	2.5e-119	92.14	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
B7SHK9	2.5e-119	92.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A6J1BQ55	2.5e-119	91.56	RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624...	[more]

BLAST of Tan0013196.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	3.8e-80	62.61	RING/U-box superfamily protein	[more]
AT1G13195.1	1.0e-77	60.35	RING/U-box superfamily protein	[more]
AT1G13195.2	1.3e-75	60.73	RING/U-box superfamily protein	[more]
AT5G01520.1	6.7e-53	44.55	RING/U-box superfamily protein	[more]
AT5G58787.1	2.0e-52	43.78	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..166 e-value: 9.9E-5 score: 31.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 127..167 e-value: 6.3E-8 score: 32.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..167 score: 11.751628
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 94..178 e-value: 2.0E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..117
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 1..225
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..225
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 122..173
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 144..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0013196	Tan0013196	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013196.2-five_prime_utr	Tan0013196.2-five_prime_utr-LG02:90876212..90876971	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013196.2-exon	Tan0013196.2-exon-LG02:90876212..90876973	exon
Tan0013196.2-exon	Tan0013196.2-exon-LG02:90877148..90877310	exon
Tan0013196.2-exon	Tan0013196.2-exon-LG02:90877422..90877488	exon
Tan0013196.2-exon	Tan0013196.2-exon-LG02:90878112..90878346	exon
Tan0013196.2-exon	Tan0013196.2-exon-LG02:90878428..90878701	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013196.2-cds	Tan0013196.2-cds-LG02:90876972..90876973	CDS
Tan0013196.2-cds	Tan0013196.2-cds-LG02:90877148..90877310	CDS
Tan0013196.2-cds	Tan0013196.2-cds-LG02:90877422..90877488	CDS
Tan0013196.2-cds	Tan0013196.2-cds-LG02:90878112..90878346	CDS
Tan0013196.2-cds	Tan0013196.2-cds-LG02:90878428..90878638	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013196.2-three_prime_utr	Tan0013196.2-three_prime_utr-LG02:90878639..90878701	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0013196.2	Tan0013196.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity