Tan0002846 (gene) Snake gourd v1

Overview
NameTan0002846
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWD repeat-containing protein 91-like protein
LocationLG07: 7974677 .. 7975174 (-)
RNA-Seq ExpressionTan0002846
SyntenyTan0002846
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA

mRNA sequence

ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA

Coding sequence (CDS)

ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA

Protein sequence

MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAEAMEAGDSSNGFHFNFHLNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN
Homology
BLAST of Tan0002846 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 79/178 (44.38%), Postives = 115/178 (64.61%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHT-SNSNSSSLKCS 60
           M FGEL ++FE L+ ++EK E+R++YHE++AQNITMAYL++  +     S ++SS LKC 
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60

Query: 61  DFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------- 120
           D+W+VL L++SC+ VYFLFF +A     R   Q+  IC ++ +ICQQI            
Sbjct: 61  DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120

Query: 121 AMEAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           AMEAGDSS+GF F+FH   L Y +F I   K ++ + + ALL VT + L A ++  C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178

BLAST of Tan0002846 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-24
Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
           MA GEL + FEEL+ + EK E+R+RY+ETK QNI   YL+F  +     +  SSS  C D
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 61  FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
           +WV+LAL+L CS +YFL F  A     R   Q+  IC +  ++ QQI           +M
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           E G+SS GF F FH   L  D F I   K+++   + ALL VT + L  S Y +CN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Tan0002846 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-22
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
           MA GEL + F EL+ + EK E+R+RYHE K Q I   YL+ +T +     S +SS KC D
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLI-LTRLFFFGISQTSSSKCHD 60

Query: 61  FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
           +WV+L+L+L CS VYFL F  A     +   Q+  IC +  ++CQQI           AM
Sbjct: 61  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120

Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           E GD S+GF F FH   L  D F     K+++   +CAL+ VT + L  S Y +CN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Tan0002846 vs. NCBI nr
Match: XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 0

Query: 6   LWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVL 65
           L + FEEL+++ EK E  LR++E++AQNITM YL++        +  SS LKC D+ VVL
Sbjct: 6   LKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCIDWRVVL 65

Query: 66  ALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI--------QAEAMEAGDS 125
            L+L CS VYFL F +A     R   Q+  IC +++ ICQQI           AMEAGD 
Sbjct: 66  GLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAMEAGDL 125

Query: 126 SNG--FHFNFH----LNYD-SFTIFNTKLFMVSIICALLIVTTLGLLA 159
           S+G  F+F+FH    LNYD SF IF  K+++ +II +L+ VT L L A
Sbjct: 126 SDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173

BLAST of Tan0002846 vs. NCBI nr
Match: XP_022157131.1 (uncharacterized protein LOC111023930 isoform X1 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-19
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLL----FITVILHTSNSNSSS- 60
           M FG L K+F+EL+ + EK ETRLRYHE++A NI MAYL+    F   +   S+S+SSS 
Sbjct: 1   MEFGVLRKNFDELKDLAEKQETRLRYHESRAHNIAMAYLIWERFFFFGVSQASSSSSSSL 60

Query: 61  -LKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI---QAEA 120
            LKCS++ +VL L+LSCS +YFLFF +       AH     +C ++ Q+C+QI      +
Sbjct: 61  LLKCSNWSMVLGLSLSCSFLYFLFFLETLTMLYLAHYHFDIVCKKQIQLCRQILDAVETS 120

Query: 121 MEAGDSSNGFHFNFHL 128
           +EAGDSS+GF F+F +
Sbjct: 121 IEAGDSSDGFGFSFQV 136

BLAST of Tan0002846 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 79/178 (44.38%), Postives = 115/178 (64.61%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHT-SNSNSSSLKCS 60
           M FGEL ++FE L+ ++EK E+R++YHE++AQNITMAYL++  +     S ++SS LKC 
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60

Query: 61  DFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------- 120
           D+W+VL L++SC+ VYFLFF +A     R   Q+  IC ++ +ICQQI            
Sbjct: 61  DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120

Query: 121 AMEAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           AMEAGDSS+GF F+FH   L Y +F I   K ++ + + ALL VT + L A ++  C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178

BLAST of Tan0002846 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 9.8e-25
Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
           MA GEL + FEEL+ + EK E+R+RY+ETK QNI   YL+F  +     +  SSS  C D
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 61  FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
           +WV+LAL+L CS +YFL F  A     R   Q+  IC +  ++ QQI           +M
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           E G+SS GF F FH   L  D F I   K+++   + ALL VT + L  S Y +CN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Tan0002846 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
           MA GEL + F EL+ + EK E+R+RYHE K Q I   YL+ +T +     S +SS KC D
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLI-LTRLFFFGISQTSSSKCHD 60

Query: 61  FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
           +WV+L+L+L CS VYFL F  A     +   Q+  IC +  ++CQQI           AM
Sbjct: 61  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120

Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
           E GD S+GF F FH   L  D F     K+++   +CAL+ VT + L  S Y +CN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Tan0002846 vs. ExPASy TrEMBL
Match: A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.6e-21
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 0

Query: 6   LWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVL 65
           L + FEEL+++ EK E  LR++E++AQNITM YL++        +  SS LKC D+ VVL
Sbjct: 6   LKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCIDWRVVL 65

Query: 66  ALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI--------QAEAMEAGDS 125
            L+L CS VYFL F +A     R   Q+  IC +++ ICQQI           AMEAGD 
Sbjct: 66  GLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAMEAGDL 125

Query: 126 SNG--FHFNFH----LNYD-SFTIFNTKLFMVSIICALLIVTTLGLLA 159
           S+G  F+F+FH    LNYD SF IF  K+++ +II +L+ VT L L A
Sbjct: 126 SDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173

BLAST of Tan0002846 vs. ExPASy TrEMBL
Match: A0A6J1DX22 (uncharacterized protein LOC111023930 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023930 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 0

Query: 1   MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLL----FITVILHTSNSNSSS- 60
           M FG L K+F+EL+ + EK ETRLRYHE++A NI MAYL+    F   +   S+S+SSS 
Sbjct: 1   MEFGVLRKNFDELKDLAEKQETRLRYHESRAHNIAMAYLIWERFFFFGVSQASSSSSSSL 60

Query: 61  -LKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI---QAEA 120
            LKCS++ +VL L+LSCS +YFLFF +       AH     +C ++ Q+C+QI      +
Sbjct: 61  LLKCSNWSMVLGLSLSCSFLYFLFFLETLTMLYLAHYHFDIVCKKQIQLCRQILDAVETS 120

Query: 121 MEAGDSSNGFHFNFHL 128
           +EAGDSS+GF F+F +
Sbjct: 121 IEAGDSSDGFGFSFQV 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022157130.13.3e-2744.38uncharacterized protein LOC111023927 [Momordica charantia][more]
XP_022157182.12.0e-2442.05uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.12.5e-2241.48uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
XP_022157172.11.4e-2045.24uncharacterized protein LOC111023951 [Momordica charantia][more]
XP_022157131.14.4e-1947.06uncharacterized protein LOC111023930 isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DS871.6e-2744.38uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DSQ09.8e-2542.05uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX741.2e-2241.48uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DTV66.6e-2145.24uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX222.1e-1947.06uncharacterized protein LOC111023930 isoform X1 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 2..165
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 2..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002846.1Tan0002846.1mRNA