Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA
mRNA sequence
ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA
Coding sequence (CDS)
ATGGCATTTGGAGAGCTGTGGAAGTCGTTTGAAGAGTTGGAGGTTGTTCTTGAGAAGCTTGAAACCAGGCTGAGATACCATGAAACCAAAGCCCAAAACATCACTATGGCCTACCTCTTGTTCATAACTGTAATCCTTCACACTTCTAATTCTAATTCGTCATCTCTCAAGTGTTCTGATTTTTGGGTTGTTTTGGCTCTCACTCTTTCCTGTTCGGTCGTGTATTTCTTGTTTTTCTCCCAGGCTTTCATCAGCTTCTGTCGAGCTCACTGTCAGATCCGCAAAATCTGCAACCAAAGGACTCAAATTTGCCAACAGATTCAGGCGGAAGCAATGGAGGCTGGAGATTCAAGCAATGGGTTCCACTTCAATTTCCATCTCAACTATGATTCATTTACAATTTTCAACACCAAACTTTTCATGGTCTCCATTATCTGTGCTCTGCTTATTGTTACTACTCTGGGTTTACTCGCCTCCAACTACAAGATATGCAACTGA
Protein sequence
MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAEAMEAGDSSNGFHFNFHLNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN
Homology
BLAST of Tan0002846 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 79/178 (44.38%), Postives = 115/178 (64.61%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHT-SNSNSSSLKCS 60
M FGEL ++FE L+ ++EK E+R++YHE++AQNITMAYL++ + S ++SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------- 120
D+W+VL L++SC+ VYFLFF +A R Q+ IC ++ +ICQQI
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 AMEAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
AMEAGDSS+GF F+FH L Y +F I K ++ + + ALL VT + L A ++ C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Tan0002846 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 123.2 bits (308), Expect = 2.0e-24
Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
MA GEL + FEEL+ + EK E+R+RY+ETK QNI YL+F + + SSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
+WV+LAL+L CS +YFL F A R Q+ IC + ++ QQI +M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
E G+SS GF F FH L D F I K+++ + ALL VT + L S Y +CN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Tan0002846 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 116.3 bits (290), Expect = 2.5e-22
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
MA GEL + F EL+ + EK E+R+RYHE K Q I YL+ +T + S +SS KC D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLI-LTRLFFFGISQTSSSKCHD 60
Query: 61 FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
+WV+L+L+L CS VYFL F A + Q+ IC + ++CQQI AM
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
E GD S+GF F FH L D F K+++ +CAL+ VT + L S Y +CN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Tan0002846 vs. NCBI nr
Match:
XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])
HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 6 LWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVL 65
L + FEEL+++ EK E LR++E++AQNITM YL++ + SS LKC D+ VVL
Sbjct: 6 LKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCIDWRVVL 65
Query: 66 ALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI--------QAEAMEAGDS 125
L+L CS VYFL F +A R Q+ IC +++ ICQQI AMEAGD
Sbjct: 66 GLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAMEAGDL 125
Query: 126 SNG--FHFNFH----LNYD-SFTIFNTKLFMVSIICALLIVTTLGLLA 159
S+G F+F+FH LNYD SF IF K+++ +II +L+ VT L L A
Sbjct: 126 SDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Tan0002846 vs. NCBI nr
Match:
XP_022157131.1 (uncharacterized protein LOC111023930 isoform X1 [Momordica charantia])
HSP 1 Score: 105.5 bits (262), Expect = 4.4e-19
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLL----FITVILHTSNSNSSS- 60
M FG L K+F+EL+ + EK ETRLRYHE++A NI MAYL+ F + S+S+SSS
Sbjct: 1 MEFGVLRKNFDELKDLAEKQETRLRYHESRAHNIAMAYLIWERFFFFGVSQASSSSSSSL 60
Query: 61 -LKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI---QAEA 120
LKCS++ +VL L+LSCS +YFLFF + AH +C ++ Q+C+QI +
Sbjct: 61 LLKCSNWSMVLGLSLSCSFLYFLFFLETLTMLYLAHYHFDIVCKKQIQLCRQILDAVETS 120
Query: 121 MEAGDSSNGFHFNFHL 128
+EAGDSS+GF F+F +
Sbjct: 121 IEAGDSSDGFGFSFQV 136
BLAST of Tan0002846 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 79/178 (44.38%), Postives = 115/178 (64.61%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHT-SNSNSSSLKCS 60
M FGEL ++FE L+ ++EK E+R++YHE++AQNITMAYL++ + S ++SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------- 120
D+W+VL L++SC+ VYFLFF +A R Q+ IC ++ +ICQQI
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 AMEAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
AMEAGDSS+GF F+FH L Y +F I K ++ + + ALL VT + L A ++ C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Tan0002846 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 9.8e-25
Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
MA GEL + FEEL+ + EK E+R+RY+ETK QNI YL+F + + SSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
+WV+LAL+L CS +YFL F A R Q+ IC + ++ QQI +M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
E G+SS GF F FH L D F I K+++ + ALL VT + L S Y +CN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Tan0002846 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSD 60
MA GEL + F EL+ + EK E+R+RYHE K Q I YL+ +T + S +SS KC D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLI-LTRLFFFGISQTSSSKCHD 60
Query: 61 FWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQIQAE--------AM 120
+WV+L+L+L CS VYFL F A + Q+ IC + ++CQQI AM
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 EAGDSSNGFHFNFH---LNYDSFTIFNTKLFMVSIICALLIVTTLGLLASNYKICN 166
E GD S+GF F FH L D F K+++ +CAL+ VT + L S Y +CN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Tan0002846 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 6.6e-21
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 6 LWKSFEELEVVLEKLETRLRYHETKAQNITMAYLLFITVILHTSNSNSSSLKCSDFWVVL 65
L + FEEL+++ EK E LR++E++AQNITM YL++ + SS LKC D+ VVL
Sbjct: 6 LKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCIDWRVVL 65
Query: 66 ALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI--------QAEAMEAGDS 125
L+L CS VYFL F +A R Q+ IC +++ ICQQI AMEAGD
Sbjct: 66 GLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAMEAGDL 125
Query: 126 SNG--FHFNFH----LNYD-SFTIFNTKLFMVSIICALLIVTTLGLLA 159
S+G F+F+FH LNYD SF IF K+++ +II +L+ VT L L A
Sbjct: 126 SDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Tan0002846 vs. ExPASy TrEMBL
Match:
A0A6J1DX22 (uncharacterized protein LOC111023930 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023930 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 1 MAFGELWKSFEELEVVLEKLETRLRYHETKAQNITMAYLL----FITVILHTSNSNSSS- 60
M FG L K+F+EL+ + EK ETRLRYHE++A NI MAYL+ F + S+S+SSS
Sbjct: 1 MEFGVLRKNFDELKDLAEKQETRLRYHESRAHNIAMAYLIWERFFFFGVSQASSSSSSSL 60
Query: 61 -LKCSDFWVVLALTLSCSVVYFLFFSQAFISFCRAHCQIRKICNQRTQICQQI---QAEA 120
LKCS++ +VL L+LSCS +YFLFF + AH +C ++ Q+C+QI +
Sbjct: 61 LLKCSNWSMVLGLSLSCSFLYFLFFLETLTMLYLAHYHFDIVCKKQIQLCRQILDAVETS 120
Query: 121 MEAGDSSNGFHFNFHL 128
+EAGDSS+GF F+F +
Sbjct: 121 IEAGDSSDGFGFSFQV 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022157130.1 | 3.3e-27 | 44.38 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157182.1 | 2.0e-24 | 42.05 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 2.5e-22 | 41.48 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
XP_022157172.1 | 1.4e-20 | 45.24 | uncharacterized protein LOC111023951 [Momordica charantia] | [more] |
XP_022157131.1 | 4.4e-19 | 47.06 | uncharacterized protein LOC111023930 isoform X1 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DS87 | 1.6e-27 | 44.38 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DSQ0 | 9.8e-25 | 42.05 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 1.2e-22 | 41.48 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DTV6 | 6.6e-21 | 45.24 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX22 | 2.1e-19 | 47.06 | uncharacterized protein LOC111023930 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |