Spg034369 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCTTCGCCCCCAGCTCCCCAAAGATTGTCTCCCCCCTCTTCTCCTCCAGTCCCCCCTTTGTGCTCCCGCCTTTGAGGCGTGAAAGGCGTAAACCTCAGTGAAAAGTGGAGTAAAAAAATTAAGGGAAAATTACACTTTTGGTCCCTGAAGTTTAGGTTTAGTGTCTATTTGGTCCCTGAAGTTTCAAAAGCAACACTTTAGTCCCTGAGGTTTGAAAAATAGTTCTAAATGGTCCTTAGGGTTAATTGACCGTTAGTTGACCTAATGGAAAGATGATGTGGTAGTTAATTAGTGATGAGACTTTGCTGAAGTGGCATTTTTAAATGAGTTGGCAAATAAATATTAATTTTATAATATTTATTTTAATTATGTGGCATTTTCGCTCTCTTCTCCTCTTCTTCTTTCTCTCCTTTTTCTTTTGGTCTTCCACCTCTTTGGCAAAGGTAGTCGCCGCATCCCTACTTATTCTCTACAACCCATTAACAAATCTGTCTAAATTCAATCATGATAATACTTCAACCCAGTGGGTCTTGCGACTGAAAGTCCTTTATTGAAAGAATTAAAAGAGAATTGTGGACGCTCTAGTGCTCGAGTACATGCTGTGATGATAAGACACTTTAGTAAATGTGGATGCCTCGGTGATGCTGTTGATCTTTTTAATGAAATGAAGAAACTTGGATGCAGCCCTAATGTGTATGTGCTTAATGCACTCATGTCAAGGATGGTAAGGGGCTGGAATGATCGACGAGGCTCATTCCTTGCTGAAGGTGAAGGAGCTTCAAGAATGAAATTTTGGCTATATTCTCCATGTTTGGTTCCTTTTTGTTAGGGTCCTCTTGAGGATTTATTGCTGTCAAAACCAACTAACGATTTATCTGGAGGATATTTATCTAGAGAACTCATGCACCAATTAGCAAGGATGAGCTCTCATGGCAGTATGGAGGATATGCTGAAGGAGAAGATGGAAGACGAAGAATAG ATGACTCTTCGCCCCCAGCTCCCCAAAGATTGTCTCCCCCCTCTTCTCCTCCAGTCCCCCCTTTTGGGTCTTGCGACTGAAAGTCCTTTATTGAAAGAATTAAAAGAGAATTGTGGACGCTCTAGTGCTCGAGTACATGCTGTGATGATAAGACACTTTAGTAAATGTGGATGCCTCGGTGATGCTGTTGATCTTTTTAATGAAATGAAGAAACTTGGATGCAGCCCTAATGTGTATGTGCTTAATGCACTCATGTCAAGGATGGGTCCTCTTGAGGATTTATTGCTGTCAAAACCAACTAACGATTTATCTGGAGGATATTTATCTAGAGAACTCATGCACCAATTAGCAAGGATGAGCTCTCATGGCAGTATGGAGGATATGCTGAAGGAGAAGATGGAAGACGAAGAATAG ATGACTCTTCGCCCCCAGCTCCCCAAAGATTGTCTCCCCCCTCTTCTCCTCCAGTCCCCCCTTTTGGGTCTTGCGACTGAAAGTCCTTTATTGAAAGAATTAAAAGAGAATTGTGGACGCTCTAGTGCTCGAGTACATGCTGTGATGATAAGACACTTTAGTAAATGTGGATGCCTCGGTGATGCTGTTGATCTTTTTAATGAAATGAAGAAACTTGGATGCAGCCCTAATGTGTATGTGCTTAATGCACTCATGTCAAGGATGGGTCCTCTTGAGGATTTATTGCTGTCAAAACCAACTAACGATTTATCTGGAGGATATTTATCTAGAGAACTCATGCACCAATTAGCAAGGATGAGCTCTCATGGCAGTATGGAGGATATGCTGAAGGAGAAGATGGAAGACGAAGAATAG MTLRPQLPKDCLPPLLLQSPLLGLATESPLLKELKENCGRSSARVHAVMIRHFSKCGCLGDAVDLFNEMKKLGCSPNVYVLNALMSRMGPLEDLLLSKPTNDLSGGYLSRELMHQLARMSSHGSMEDMLKEKMEDEE Homology
BLAST of Spg034369 vs. NCBI nr
Match: KAG7018336.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. NCBI nr
Match: XP_022955569.1 (pentatricopeptide repeat-containing protein At3g16010 [Cucurbita moschata]) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. NCBI nr
Match: KAG6581902.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. NCBI nr
Match: XP_038900614.1 (pentatricopeptide repeat-containing protein At3g16010 [Benincasa hispida]) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. NCBI nr
Match: XP_023528001.1 (pentatricopeptide repeat-containing protein At3g16010 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy Swiss-Prot
Match: Q9LW84 (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy TrEMBL
Match: A0A6J1GWN2 (pentatricopeptide repeat-containing protein At3g16010 OS=Cucurbita moschata OX=3662 GN=LOC111457547 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.3e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy TrEMBL
Match: A0A7C9A1B6 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy TrEMBL
Match: A0A498HHU8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_031418 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy TrEMBL
Match: A0A7J7HYV2 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_004313 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. ExPASy TrEMBL
Match: A0A4V6RY92 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017300 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18 Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Spg034369 vs. TAIR 10
Match: AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 4.0e-16 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Spg034369 vs. TAIR 10
Match: AT1G73710.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 6.0e-04 Identity = 19/57 (33.33%), Postives = 33/57 (57.89%), Query Frame = 0
BLAST of Spg034369 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 6.0e-04 Identity = 19/56 (33.93%), Postives = 31/56 (55.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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