Spg028129 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCTATGGAAAAATAGGGAAAATAAGCAGAAAAAAAGCGGGAATAAGAAAAATTAAAAAACGAAAGGCGCCCGGTCACACTTTCGGAAAAAGACTCAATAATCTCTCTCTGTCTTTGCTCAAAAAGTACGCACTTCACATTCATCTTCATCTTCTCTTTCGCCTTCATCTGTGTTTTCTCCTTCGTCTTTGTCTTCCCCTTTTCTCCATTAGGTTTTCTTATCAGTCGTACGTGCAGAGCCCTAACTCTGTTATCTCCTTCATCGTGCGACAACATCGAATCCGATAATGAACCTACGGCTTCCAGCACTTGGAATTCTAGGTATTTGATTTTAGTAGCCAATGGTGTATCTTTTTTTTTTTTTCTTTTTTTCTCAAAGATTAAGTTTTAAGAGGTAGAATGTTTGTCTCATGTTGTTTAAATCTAACCTGTTCAACATTAGGAATTGCAAGCTCGGCAAAAAGAGAAGACGAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGAAAGAAAGGAAGAATATCGTGAAATTGAGATGCGTCTGAAAGGATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGGTAATTAACCATTAGCGGTAGCTTTTATTGTACTTCTAATCATTAACTTGATCTTTCAAAAAGTAAGGTCGTATCTTCAATTCGGCATGAAGTATTCTTGTTCTTCCTTACGGCTAAGCTTTTATGGCAATGCCCTAAAAGGTAGTCTTAAGTAGACAAAAACCATGAGTTCCCAATCAAACAATTAGAGTTCAGTTCACTTCCTATAGCTTGCACGGTGACTTGGCTATGGTTTGAGAATGAAGGATATTGAGGGTCTTTTATGAGTATATTCTTCTTGGATATGATTATTGTGTTCTACTCATGGGTAGTATTCATGGTGATTTTTCTTTGAATTTTCTCAATTTCATACCATTTTTCACAGAAAGCTCTAAATTATTGCAAACTGGCTTAGTGACGTACTGATATTGTAGTTGTTTATCAATTGGAATGCAGAAAATTGAGGAAGCTGTTGAGAAAGGAGAACTAACAGAGCTTGTTCTACTAGTGATATGGAATCAACTTGATTTAGCAAGTCGTGATGTATGTTAGCCTTCAAATTCCTTTAATTTCCATTTGCTTGTTAATTTTGGAGGGAGCCTAGTTGTATGTGCTTATAACTAGTTCTTTCTTTTTCTTCCTCCTAAGATTTTGTGCCATCTTTTCATCAATGCATAGAGAAATTCAGCAAAAATGGCAAGCAGGGGCAGCGAGGGAAGATGAATCTTGACCATTCTCGAATTATATATGTGCAGAACTATAGGTAAGGAATTATAGATATATCTATGCCCTTGAGACATGTTCTTTTTTCTTCTTTTCTTGCATTTTGGTTGTTTTGATTTGTGAACTGAGTACACTGCACAACACTACCTTCATCAATGATGAGTCTTAAGCCATCAATGTGAAGCTTTCCATGATGTCCACTCACAAACAATTGTTGGCTTCTCATCATTATTCTCAGATAGTTCCGGTAAGAATTATTTCAAGTTATATAATTCATTTTCCATTAAAATTAAAAGAGAATTCTGAATTAATTAAGAGTGTTTAAAGTGATATTTCACGTTTGGGATATTCCAAACGTTTTTCCTCTCACTTACACCCATTATTTTGGGAAATTTGGTTTCTCTGGGTTTCAAAAGTTTGAGTTGTTCTTCAACATCTTTCTCTTCCTCTAAACATGCGTGGACTGCAATCAATCTGCAGTTTTTTATGCTATCTTTTGTCTCCAAACGCATATCGTCCTGGAATTAATTACAAAAATTATTATAACTTTGTTGTTTTTCTTGAAATTGTGACATATTTATTATAGGTTGTTTGGTTGAGAGAGATTTAGCTTCTTGCCTCATCATGAACCCAAACCAGATTGGAAAGGAACTTCTTGTGTTCTTCAGGTACCTCTTTCACCAACTCTAAATAACAATACTTCTTACATTAATTATTTTGTTTTGGATTTGATATAGAATTAAGACAATAATGTTTGATAGCATTTCTGTTCCTTTTTTTTTTTTTTTTCTCTCTTGTTTATTTTTCAATGATCCTTGGTTTTAGAAGAAAGAAAAGCAAAAATGTGTTTGATAATGACTTTTTATGTCTTGTATTTTTATTAATATGTTTCATGTTACTTGTTTCTTATTCTCTAAAATTTCAAATTTCAAATCTGTAGTTGAGTACTTCCAAGAGATGTATGGATATACCATTCAGTATACACATTTGCCTTGTGAATAGGAAACCAAAAGGTGAATTATCTACCCATGGAGGTCAGTTTGCCAACTACCTCTCAAGTTACCTTCTACCACAGTTGAATAATTTGTCTGCAGAAAATTTACATGACTTATTTCACATTGCCAACCAGGAGAAGCTTCTTATTTATTCTTATTTCACATTGCCATCCAATACCTTGCCGCTGTACAATATAAGATAAAGCGATTATCCCTCTTTCTTTTCTTTACCTTGTTGCTTTAACATCTTCTCCTATATATATAAGCTAACTTTTGATTGACCTTACATTTTACTACTTATATATGTTTGAGGCATTTTTCTTGAATAATATAGATTTTATGTGTTCTGCTATTGCTTATGGTTTCCTTTGAGGGGTTGAAATTTTGAGTTTTGTTTAGATGTCATATTGGTGTGGTTTCTTATTGTTTATTCAGGTAGACTACCCTAATATGATTGTTGGTTTGCTGAGGATTTCAGTTTTATTCCACACTATGGTTGGATTTCAGATTGTGAACTTTTGCAATGCAGTATAA ATGCGTCTGAAAGGATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGTTGAGAAAGGAGAACTAACAGAGCTTGTTCTACTAGTGATATGGAATCAACTTGATTTAGCAAGTCGTGATGTATGTTGTTTGGTTGAGAGAGATTTAGCTTCTTGCCTCATCATGAACCCAAACCAGATTGGAAAGGAACTTCTTGTGTTCTTCAGGAAACCAAAAGGTGAATTATCTACCCATGGAGACTACCCTAATATGATTGTTGGTTTGCTGAGGATTTCAGTTTTATTCCACACTATGGTTGGATTTCAGATTGTGAACTTTTGCAATGCAGTATAA ATGCGTCTGAAAGGATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGTTGAGAAAGGAGAACTAACAGAGCTTGTTCTACTAGTGATATGGAATCAACTTGATTTAGCAAGTCGTGATGTATGTTGTTTGGTTGAGAGAGATTTAGCTTCTTGCCTCATCATGAACCCAAACCAGATTGGAAAGGAACTTCTTGTGTTCTTCAGGAAACCAAAAGGTGAATTATCTACCCATGGAGACTACCCTAATATGATTGTTGGTTTGCTGAGGATTTCAGTTTTATTCCACACTATGGTTGGATTTCAGATTGTGAACTTTTGCAATGCAGTATAA MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAVEKGELTELVLLVIWNQLDLASRDVCCLVERDLASCLIMNPNQIGKELLVFFRKPKGELSTHGDYPNMIVGLLRISVLFHTMVGFQIVNFCNAV Homology
BLAST of Spg028129 vs. NCBI nr
Match: MCH99641.1 (PAC [Trifolium medium]) HSP 1 Score: 111.7 bits (278), Expect = 4.8e-21 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg028129 vs. NCBI nr
Match: MCH86628.1 (PAC [Trifolium medium] >MCI03190.1 PAC [Trifolium medium]) HSP 1 Score: 111.7 bits (278), Expect = 4.8e-21 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg028129 vs. NCBI nr
Match: VVA14020.1 (PREDICTED: PALE CRESS [Prunus dulcis]) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. NCBI nr
Match: XP_034227598.1 (protein PALE CRESS, chloroplastic isoform X1 [Prunus dulcis] >VVA14019.1 PREDICTED: PALE CRESS [Prunus dulcis]) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. NCBI nr
Match: CAB4322055.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy Swiss-Prot
Match: Q39089 (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.9e-19 Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy TrEMBL
Match: A0A392MIU4 (PAC (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0007487 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.3e-21 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy TrEMBL
Match: A0A392NJP7 (PAC OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.3e-21 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy TrEMBL
Match: A0A5E4EGC0 (PREDICTED: PALE CRESS OS=Prunus dulcis OX=3755 GN=ALMOND_2B015261 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy TrEMBL
Match: A0A4Y1S0U1 (Pale cress protein OS=Prunus dulcis OX=3755 GN=Prudu_023078 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. ExPASy TrEMBL
Match: A0A5E4EGD7 (PREDICTED: PALE CRESS OS=Prunus dulcis OX=3755 GN=ALMOND_2B015261 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg028129 vs. TAIR 10
Match: AT2G48120.1 (pale cress protein (PAC) ) HSP 1 Score: 94.7 bits (234), Expect = 5.6e-20 Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Spg028129 vs. TAIR 10
Match: AT2G48120.2 (pale cress protein (PAC) ) HSP 1 Score: 94.7 bits (234), Expect = 5.6e-20 Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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