Sed0023369 (gene) Chayote v1

Overview


Name	Sed0023369
Type	gene
Organism	Sechium edule (Chayote v1)
Description	poly(U)-specific endoribonuclease-B-like
Location	LG07: 9885498 .. 9891012 (-)
RNA-Seq Expression	Sed0023369
Synteny	Sed0023369

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCTCACTTTTTTCACACTCTCTCTGAATCTGAAAAAAAAAAAAAAAATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTACTAATGGTGTAGCAATTGAGCGATCGTAGCTTCGAATTAGTTCTTGTTTTGTGATGATTTTGGTGGTGGAATTGTTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGTCTGTTTATGGCTGGGATTATTGATTGTGGAATTGAATGTGTTTGGTGGTTTCTGTTGGATTTGGTGTGGAATTGAAATGTTTAGGGTTTTTTTGATTGGTTTTGCAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTAGATCTATTTTCTTCACCATTCTAAAAGTTGAGATCGTCTTCAAGATGATCTAATGTTGTTTCTTAGATTTAGGCATTTTGCAAGTTTAGACTCGTTTCGACATTTTATTGAAGCATATTGAATCCAGATCCGCCAACAAGAGCATAGTTCTAGAAAGACGATGTATAATCTTGTAATCAAGAGGTCGTGGGTTTAAATTCCTCCCCCATATCAATATATATATATTCTTACCTAATGGAGATTTTTTTGAATCTATATGACGGTTTCCAAAAACCATCATATTGTTAATCGTTTTAGGAAGTGTAGTTTTGGATACAATTACATAACAATTTAGTACCATTAAAAGTCTAGGCCTTGGAGTGAGTAGAGACTTTTTATTAGGAAAATATTATACCATTAAAGAAAAACAAAGACACAATATCTATTAAGACCGTGATAGGCTATTGTCTACTGGTTTTATTTTTTTGGTTTCTACCTAAAAAACTTTGTAAGAATGGAGATTGTATTATTATTTATGTATACGACCAAAATCTTATCTACTACTAATCGACGTGGGGCTGTGTTAACTGTTGATAACACATCCCTGGGGCATGTGAAGATAAAAGAATGAAACTAAATTGGGGTGGGGGTTCGAACCCGTAACCTCTTGGTTACCGGGTTATACAAGGTGCCATCGGAGTTCTGCTCTTTTGATCTTATGATTTAATTCTTATCTTGATATTGATATCACTGAAATTGCTTATTCTAGAAGGAGAACATTTTCTGCTAGTGATGATAAATACTGTCGTTTCTTATATTAGATTTGTGTTTTTGACATAACCTTTGACCAGATTCAATTGGGTGGATTGATGTTGTAAGCTATTATTTTTGGTACTTTAGTACCAATAGCAATTTCATTTCCTCCACTTTGATATAGTGCTGACTCACTTGCAAAATGGACAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGTCTGTTTTTGTTCTTTATTTCTCAGTACTGCGTTTATATCGTGAAATCGCTAAAATTTTTCACATATATGTTCAAATGGTATTAACTGCACTGTACAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTTACTTATTTCTCATGAGAAAATACTTTGATAAATACATGTTGGGTGTGTTGTTTTATATGATTTATTAGTCCAAATGTTTCTTTGGAAGAGAACTTGTAGCACAATTTCTGTTCTTTTATACAATGTTGAGTCTGAATCTGAATGTCTGACTTGGATGGTGTAGCAAAGCCTCCCAGGCAACTGTTTTATTTTTTGGTTTTTGAAAATTTTGCTTATTTTCTAATAATTTCTGTACACTAAGTTTCATCTTTCTCAAGAAAACATTTGAGTTCTTGTCAAATTTAGAAAAACAAAAACAATGTTTTTGAGAAGTATTTTTTTTTAGTTTTCGAAACTTAGATTGTTTTTTTAAAACATAGGTAAGATGTACATAAAAGCTAAGGAGACTCGTAGGTGGAAGCAATATTTATGACTTAATTTTAAAAAAATAAAATAGTTATCAGACGGATCTAAATTATTAGTTTTGTTCTTGATGCAAGGAATGTGGGTAAACATGATAATCATGGGCAGTTATAATGTTTATTTAAGAACTAAAAGTTTGTATTCTCAATTGATAATTTTGTGACATATTTAGCTACAGATTGCATAATTAATTATACATTTTACAATCATTTTAATCTCTCTTTTGGGTAAGCTGGAACCAAGTTTTCATAGAGAAAAATGAAAGAATGTACAAAAGCATACAAAAAAAATCATCTTTAATCTTCCAAGGGGTGTCCATCTAAACCCATATATTTCAATGTACTCATTTTCATTTTGACAAAAGTGGTTTTTCACCTAGTTTCTGGGCAATTTTTTCAGATTTTTGACTAGTAGTGAACTTTGAGAGGTTTCATAGTAGTTGCTTGGAGTTCAAACAATAACTCTAAAACTGACTCCTTGTGCAATAATATTTTAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGGTTAGTGCCTTATTCTGAGATTGGCTGTCACAAAACATAGTGCTAGAAATAATCTATCTGTTTAATATGTATCTAATCATTGAAGCCCTTTGACAAGGCAATAGAAACAGGGTTGGAATGGTAAATGAAAATTCTCCTTTTTAGTTTGTCTAAGGTTAAATTATATCAAAGAGTCAAGATTTTAGGATTTTCTCTCTAATTTGCTAATTTTAATAAGTCTTGCTGCACACCATGTGAATTCTGGATATGCCCCTTAAATGGCAATGAACCTACTGAGCTATGACTGAATTTCATAAAACGCTATTATATGCCTAAGATAGCATTTTTTGAATGCTATCATATGTAAATTTTCTTGTAGTGTGTTCACCCAACCCGTCAGTCTTAGACAATATTTTTAACTTGTGAAGTTGACTGAGTTTTTGTGTCTCAAATCGCTCAAATGATCTATACAACGTTTGTCTGGAAATCTAACCGGCCTAAAATTTTCTTAATATTAGAATTTTCTTTGCTGGAGTTTTCTGAACTTACCATCTTTCTTATATCTGACCTTTTGTCCATGTGCATTTATTTCAAATCTAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTGTAAGTAGCTCATCTTGAAGTATTATTTTTTGTGTATTTGATTTTGAGTTGCAAAGAAATAAATTGTGAATGCTCATGTCATGCAGCATCATTGTGGAACTTTCTTAAATTATTTGAAACTCCATCCGACTTTATCATTTAATCAGGGAAAACATTCTTGTAACTAAACCTAAAGTTACCAATAGGAAAGATGATTATAGAACAATCACTTTCATGTTCAGCATTATTCTGTATTGAAGAAACTAAATGTTTAGGCTTCGTTTGATAACCATTTTGTTTTTCGTTTTTTTTTTTTTGAAATTTAAGCCTACAACAACTACCTTATCATAACTTTTTTCTTATTTGGATGTCTCCATCTTACCTATATTTTAATAAAAAAAACTAAAATTTGGAAACAAAAAAGAGTAGCTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCAACTTTCTGATACGACCCCGAGACCGTTGAAGGTCTATTCAAAACGGAGCAAGAAGTGAGACGGAGCAAGAAGTGACGGGCTTAATTATTATTCTTTAATTTATTTATGTTAGAGTTATTTAAGTTGTATTAGGCTTTTGGTTATTTAATTAGGGTTTCTTGTAGGATTAGGAAATAGGATTAGGATTAAGATTAGGATTAGGAAATAGGATTAGGATTAGGATTAGGATTAGGAAGATGTTCTAATTCTATAAATAGGAGGAGTTAGTTCATTATTATTCATTCAGTTATCATCTTTGTACTCTGACTTTTTGAGAGATCCTCTCGAGAGAATTACCGTAGTTTAATAAAAGTGTGGTAGATTCTATCACTTTCTTAAGGAAAGATGAATATATTGTAGGAAAGATGGAGCACATAGTAGGAAATTTGAGTAGAAATAGGCTTAAATTTCATAAACAAAAAACCAAATGGTTATCAAATGGAGGCCTTGGTTATGGAGTCAAATAACTTGAACTTTTAGTGGTTACCATAAGTAAAAAAAAATTAAAAATAAACCTGCATATGCCTGATATTTTTCAGGCTATTAAATTTGTGTTGTTCCAACATGCATTAGTTCTAAGAACACTGTGAAATTCAAGAACTTGCCTCACTTTCTGGAAGATAAGCATTCCCTAATCCATTTCCTAATGATTTGTTTGATAACCATGCAGCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGAAGTTTCTTCGCTGAGATTAATCCAGTTATTTCCCTTAAATTCTTCAGTATACATCTAAGAAAAGATTGTATCATAGACTTTGAGATAATGATATCTTTAGAAGGTGAAAATGATTCTCAGGATGTATTCATTAGTTCCTAGAGGATATTGAAACTTTTGTATTATTACATGGGTCTGCAAATGGTGTCTTTCATCTCTTCCATATCTTGTAAGTGGTTGTCTTTCACTTTTATTCCCTAAACTAAATGTATATGAACCATTATCTAAATGGTAGTTTGCTTCTCACTCTTCTTGTT

mRNA sequence

AACTCTCACTTTTTTCACACTCTCTCTGAATCTGAAAAAAAAAAAAAAAATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGAAGTTTCTTCGCTGAGATTAATCCAGTTATTTCCCTTAAATTCTTCAGTATACATCTAAGAAAAGATTGTATCATAGACTTTGAGATAATGATATCTTTAGAAGGTGAAAATGATTCTCAGGATGTATTCATTAGTTCCTAGAGGATATTGAAACTTTTGTATTATTACATGGGTCTGCAAATGGTGTCTTTCATCTCTTCCATATCTTGTAAGTGGTTGTCTTTCACTTTTATTCCCTAAACTAAATGTATATGAACCATTATCTAAATGGTAGTTTGCTTCTCACTCTTCTTGTT

Coding sequence (CDS)

ATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGA

Protein sequence

MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTSGSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGNKIGSVFPVAES

Homology

[Close]

BLAST of Sed0023369 vs. NCBI nr
Match: XP_023539783.1 (poly(U)-specific endoribonuclease-B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 769.2 bits (1985), Expect = 1.8e-218
Identity = 388/440 (88.18%), Postives = 405/440 (92.05%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH+DD+NNNNEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGHDDDNNNNNEQSAPQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREES-EVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKN 120
           RHG D NR+DNE+EGRSRREE  EVEGSR SG+RQQ EYGSEHGYNR+Q AK+E SEE N
Sbjct: 61  RHGNDSNRRDNEKEGRSRREEEWEVEGSRISGQRQQGEYGSEHGYNRDQWAKKEGSEENN 120

Query: 121 GGWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNK 180
            GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNK
Sbjct: 121 DGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNK 180

Query: 181 LWELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNY 240
           LWELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWV+EDVFRKPT SRFCSLLDNY
Sbjct: 181 LWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVNEDVFRKPTFSRFCSLLDNY 240

Query: 241 NPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWF 300
           NPDQGS+EVVTPEERQEQAAFIEEISRTAPIKYLHKYLS KGVTSNDYQDFKRML  LWF
Sbjct: 241 NPDQGSKEVVTPEERQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWF 300

Query: 301 DLYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360
           DLYGRGGTS SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRR
Sbjct: 301 DLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360

Query: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420
           GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV
Sbjct: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420

Query: 421 NIKCYRLGNKIGSVFPVAES 430
           NIKCYRLGNKIGSVFPVAES
Sbjct: 421 NIKCYRLGNKIGSVFPVAES 440

[Close]

BLAST of Sed0023369 vs. NCBI nr
Match: KAG7030180.1 (Poly(U)-specific endoribonuclease-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 763.1 bits (1969), Expect = 1.3e-216
Identity = 385/439 (87.70%), Postives = 403/439 (91.80%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH  DD+NNNEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGH--DDDNNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNG 120
           +HG D NR+DNE+EGRSRREE EV+GSR SG+RQQ EYGSEHGYNR+Q AK+E SEE N 
Sbjct: 61  KHGNDWNRRDNEKEGRSRREEWEVQGSRISGQRQQGEYGSEHGYNRDQWAKKESSEENND 120

Query: 121 GWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKL 180
           GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNKL
Sbjct: 121 GWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKL 180

Query: 181 WELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYN 240
           WELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWVSEDVFRKPT SRFCSLLDNYN
Sbjct: 181 WELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYN 240

Query: 241 PDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFD 300
           PDQGS+EVVTPEE+QEQAAFIEEISRTAPIKYLHKYLS KGVTSNDYQDFKRML  LWFD
Sbjct: 241 PDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFD 300

Query: 301 LYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360
           LYGRGGTS SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG
Sbjct: 301 LYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360

Query: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420
           QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN
Sbjct: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420

Query: 421 IKCYRLGNKIGSVFPVAES 430
           IKCYRLGNKIGSVFPVAES
Sbjct: 421 IKCYRLGNKIGSVFPVAES 437

[Close]

BLAST of Sed0023369 vs. NCBI nr
Match: XP_022936491.1 (poly(U)-specific endoribonuclease-B-like [Cucurbita moschata])

HSP 1 Score: 760.4 bits (1962), Expect = 8.5e-216
Identity = 384/439 (87.47%), Postives = 402/439 (91.57%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH  DD+ NNEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGH--DDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNG 120
           RHG D NR+DNE+EGRSRREE EV+GSR SG++QQ EYGSEHGYNR+Q AK+E SEE N 
Sbjct: 61  RHGNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENND 120

Query: 121 GWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKL 180
           GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNKL
Sbjct: 121 GWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKL 180

Query: 181 WELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYN 240
           WELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWVSEDVFRKPT SRFCSLLDNYN
Sbjct: 181 WELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYN 240

Query: 241 PDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFD 300
           PDQGS+EVVTPEE+QEQAAFIEEISRTAPIKYLHKYLS KGVTSNDYQDFKRML  LWFD
Sbjct: 241 PDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFD 300

Query: 301 LYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360
           LYGRGGTS SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG
Sbjct: 301 LYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360

Query: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420
           QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN
Sbjct: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420

Query: 421 IKCYRLGNKIGSVFPVAES 430
           IKCYRLGNKIGSVFPVAES
Sbjct: 421 IKCYRLGNKIGSVFPVAES 437

[Close]

BLAST of Sed0023369 vs. NCBI nr
Match: KAG6596904.1 (Poly(U)-specific endoribonuclease-B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 759.6 bits (1960), Expect = 1.5e-215
Identity = 383/439 (87.24%), Postives = 402/439 (91.57%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH  DD+NNNEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGH--DDDNNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNG 120
           +HG D NR+DNE+EGRSRREE EV+GSR SG+RQQ EYGSEHGYNR+Q AK+E SEE N 
Sbjct: 61  KHGNDWNRRDNEKEGRSRREEWEVQGSRISGQRQQGEYGSEHGYNRDQWAKKESSEENND 120

Query: 121 GWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKL 180
           GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNKL
Sbjct: 121 GWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKL 180

Query: 181 WELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYN 240
           WELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWVSEDVFRKPT SRFCSLLDNYN
Sbjct: 181 WELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYN 240

Query: 241 PDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFD 300
           PDQGS+EVVTPEE+QEQAAFIEEISRTAPIKYLHKYLS KGVTSNDYQDFKRML  LWFD
Sbjct: 241 PDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFD 300

Query: 301 LYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360
           LYGRGGT  SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG
Sbjct: 301 LYGRGGTCHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360

Query: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420
           QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN
Sbjct: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420

Query: 421 IKCYRLGNKIGSVFPVAES 430
           IKCY+LGNKIGSVFPVAES
Sbjct: 421 IKCYQLGNKIGSVFPVAES 437

[Close]

BLAST of Sed0023369 vs. NCBI nr
Match: XP_022155525.1 (poly(U)-specific endoribonuclease-B-like [Momordica charantia])

HSP 1 Score: 759.2 bits (1959), Expect = 1.9e-215
Identity = 374/431 (86.77%), Postives = 399/431 (92.58%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNR 60
           MEGLIKG+LD+A+GH   D+N +E+SA QSRDERSRSTWAQVV+GEED GDRR GY PNR
Sbjct: 1   MEGLIKGVLDIALGH---DDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNR 60

Query: 61  KDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKK 120
           +D+EEEGRSRR+E EVEGSR SG+RQQ EY SEHG+NRN  A EE SEEKN GWETVHKK
Sbjct: 61  RDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWATEEGSEEKNDGWETVHKK 120

Query: 121 APRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRL 180
            PR+ HKVQIDNW GYKRP SEQNYSDEVE G+ELEPSEDELAD+S ACNKLWELDLNRL
Sbjct: 121 PPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRL 180

Query: 181 VPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREV 240
           VPGKDYEIDCGEGKRVSGREDMA+GCLFSWVSED FRKPT SRFCSLLDNYNPDQGSRE+
Sbjct: 181 VPGKDYEIDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREI 240

Query: 241 VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTS 300
           VT EERQEQAAF+EEISRTAPIKYLHKYLSS GVT NDYQDFKR+L  LWFDLYGRGGTS
Sbjct: 241 VTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTS 300

Query: 301 GSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQ 360
           GSSSAFEHVFVGEIK  G+Q+VSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQ
Sbjct: 301 GSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQ 360

Query: 361 LLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGN 420
           LLTIQFEWNG+LKSVSSTL+GVSPEFELALYTLCFFLGGEDNHVELGPYP+NIKCYRLGN
Sbjct: 361 LLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNHVELGPYPINIKCYRLGN 420

Query: 421 KIGSVFPVAES 430
           KIGSVFPVAES
Sbjct: 421 KIGSVFPVAES 428

[Close]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot
Match: Q503V9 (Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-57
Identity = 118/270 (43.70%), Postives = 156/270 (57.78%), Query Frame = 0


Query: 164 DISHACNKLWELDLNRLVPGKDYEIDC-GEGKRVSGREDMAQGC---LFSWVSEDVFRKP 223
           ++S    +LW+ D NRL PG DY I   G+   ++G  D + G    LFS+V E++F+K 
Sbjct: 7   ELSALIQELWDNDTNRLRPGIDYRISLQGKAGDLAGVPDDSDGAGMPLFSFVDENIFKKE 66

Query: 224 TISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDY 283
           T   F SLLDNY  D G  E+VTPEE  E   F++ + +T  +K  HKYL  K ++  D 
Sbjct: 67  TFLAFISLLDNYESDTGEPEIVTPEEEMENHRFLDSVIKTPTMKIAHKYLVEKRLSPEDT 126

Query: 284 QDFKRMLNGLWFDLYGRGGTS-GSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAKGSV 343
             FK+ L  +WF+LY R G+S   SS FEHVFVGE +G   V GFHNW+Q YL+E  G +
Sbjct: 127 TGFKQQLYKIWFELYARKGSSKPDSSGFEHVFVGETRGGHTVIGFHNWIQLYLQEKLGHI 186

Query: 344 DYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLG-G 403
           DY+GY       Q PD    +L +QF W   +K   S  +GVSPEFE +LYTLCF +   
Sbjct: 187 DYKGYSVNANSPQ-PDENKHMLALQFSWKNGIKPKGSIFIGVSPEFEFSLYTLCFLMSPN 246

Query: 404 EDNHVELGPYPVNIKCYRLGNK-IGSVFPV 427
           E   V    Y V I C+    K IG+ +PV
Sbjct: 247 ERVKVSFNLYDVEIVCHHYNQKHIGTTYPV 275

[Close]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot
Match: Q8JFY9 (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51
Identity = 114/274 (41.61%), Postives = 152/274 (55.47%), Query Frame = 0


Query: 164 DISHACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAQGCLFSWVSEDVFR 223
           ++S   N+LW+ D NR+  GKDY I   +GK        +   D A   LF +V E+  +
Sbjct: 11  ELSKLFNELWDADQNRMKSGKDYRISL-QGKAGYVPAGSNQARDSASFPLFQFVDEEKLK 70

Query: 224 -KPTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTS 283
            + T + F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 71  SRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAK 130

Query: 284 NDYQDFKRMLNGLWFDLYGRG-GTSGSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAK 343
               DFK  L  +WF LY R  G+   S  FEHVFVGE K  Q++ G HNW+QFYL+E +
Sbjct: 131 PTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKRGQEMMGLHNWVQFYLQEKR 190

Query: 344 GSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFL 403
            ++DY+GY+  R+    PD + Q+L +QF W  ++K V S+ +GVSPEFE ALYT+ F  
Sbjct: 191 KNIDYKGYV-ARQNKSRPDEDDQVLNLQFNWKEMVKPVGSSFIGVSPEFEFALYTIVFLA 250

Query: 404 GGED---NHVELGPYPVNIKCYRLGNKIGSVFPV 427
             E      V L  Y + I   R G  IG+ +PV
Sbjct: 251 SQEKMSREVVRLEEYELQIVVNRHGRYIGTAYPV 282

[Close]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot
Match: B1WBB4 (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51
Identity = 112/273 (41.03%), Postives = 153/273 (56.04%), Query Frame = 0


Query: 164 DISHACNKLWELDLNRLVPGKDYEIDCGEGK------RVSGREDMAQGCLFSWVSEDVFR 223
           ++S   N+LW+ D+NR+  GKDY I   +GK      R +  +D A   LF +V E+  +
Sbjct: 11  ELSKLFNELWDADVNRMKAGKDYRISL-QGKAGYVPARSNQAKDSASYPLFQFVDEEKLK 70

Query: 224 -KPTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTS 283
            K T + F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 71  SKKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAK 130

Query: 284 NDYQDFKRMLNGLWFDLYGRG-GTSGSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAK 343
               DFK  L  +WF LY R  G+   S  FEHVFVGE K  +++ G HNW+QFYL+E +
Sbjct: 131 PSQNDFKVQLYSIWFQLYSRAPGSRPDSCGFEHVFVGESKRGKEMMGLHNWVQFYLQEKR 190

Query: 344 GSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFL 403
            ++DY+GY+  R+    PD + Q+L +QF W  ++K V S+ +GVSPEFE ALYT+ F  
Sbjct: 191 KNIDYKGYV-ARQNKSRPDEDDQVLNLQFSWKEMVKPVGSSFIGVSPEFEFALYTIVFLA 250

Query: 404 GG---EDNHVELGPYPVNIKCYRLGNKIGSVFP 426
                    + L  Y + I   R G  IG+ +P
Sbjct: 251 SQAKMSREVIRLEEYELQIVVNRHGRYIGTAYP 281

[Close]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot
Match: B1H3D5 (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.0e-51
Identity = 112/274 (40.88%), Postives = 151/274 (55.11%), Query Frame = 0


Query: 164 DISHACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAQGCLFSWVSEDVFR 223
           ++S   N+LW+ D NR+  GKDY I   +GK        +   D A   LF +V E+  R
Sbjct: 12  ELSKLFNELWDADENRMKAGKDYRISL-QGKAGYVPAGSNQARDSASYPLFQFVDEEKLR 71

Query: 224 -KPTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTS 283
            + T + F SLLDNY  D G  EVVTPEE  E   F++ I  T  +K  H YL  K    
Sbjct: 72  SRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAK 131

Query: 284 NDYQDFKRMLNGLWFDLYGRG-GTSGSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAK 343
               DFK  L  +WF LY R  G    S  FEHVFVGE K  +++ G HNW+QFYL+E +
Sbjct: 132 PSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRGKEIMGLHNWVQFYLQEKR 191

Query: 344 GSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFL 403
            ++DY+GY+  R+    PD + Q+L +QF W  ++K + S+ +GVSPEFE ALYT+ F  
Sbjct: 192 KTIDYKGYV-GRQNKSRPDHDDQVLNLQFSWKEMVKPIGSSFIGVSPEFEFALYTVVFLT 251

Query: 404 GGED---NHVELGPYPVNIKCYRLGNKIGSVFPV 427
             E      V +  Y + I   R G  IG+ +PV
Sbjct: 252 SQEKMTREVVRVEEYEMQIVVNRHGRYIGTAYPV 283

[Close]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot
Match: Q1LUM3 (Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.4e-48
Identity = 109/273 (39.93%), Postives = 154/273 (56.41%), Query Frame = 0


Query: 164 DISHACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAQGCLFSWVSEDVFR 223
           ++S+  N+LW+LD+NR+ P  +Y I   +GK        +   D A   LF  V E    
Sbjct: 30  ELSNIFNELWKLDVNRMEPLTNYNISL-QGKAGYIPQGSTNVVDHASSPLFVNVDEAKLS 89

Query: 224 K-PTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTS 283
              T +RF  LLDNY    G  E VT EE  E  +F++ I  TA +K  H+YL  KG + 
Sbjct: 90  SITTYARFMKLLDNYERSTGVAERVTAEEVTENNSFLDAILETAVMKRAHQYLIGKGKSR 149

Query: 284 NDYQDFKRMLNGLWFDLYGRGGTSG-SSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAK 343
           +D + FK  L  +WF LY R    G  SS FEHVFVGE K  +++ G HNW+QFYL+E +
Sbjct: 150 SDLRQFKSQLYYMWFRLYHRERNGGEDSSGFEHVFVGETKFGREIMGLHNWVQFYLQEKQ 209

Query: 344 GSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFL 403
             +DY+GY    R    PD++  +L +QF W+G++K V+S  VGVSPEFE+A++T+ F  
Sbjct: 210 NLLDYKGY--KARANDVPDADDHVLNVQFSWHGLVKPVASAFVGVSPEFEMAVFTILFLT 269

Query: 404 GGEDNH---VELGPYPVNIKCYRLGNKIGSVFP 426
             E      V L  Y + +  +R G  IG+ +P
Sbjct: 270 STEKTTTAVVNLDEYQLEMVVHRHGRCIGTAYP 299

[Close]

BLAST of Sed0023369 vs. ExPASy TrEMBL
Match: A0A6J1F7L9 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita moschata OX=3662 GN=LOC111443088 PE=3 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 4.1e-216
Identity = 384/439 (87.47%), Postives = 402/439 (91.57%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH  DD+ NNEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGH--DDDKNNEQSASQSRDERSRSTWAQVVTGEEDADRDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNG 120
           RHG D NR+DNE+EGRSRREE EV+GSR SG++QQ EYGSEHGYNR+Q AK+E SEE N 
Sbjct: 61  RHGNDWNRRDNEKEGRSRREEWEVQGSRISGQQQQGEYGSEHGYNRDQWAKKESSEENND 120

Query: 121 GWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKL 180
           GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNKL
Sbjct: 121 GWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNKL 180

Query: 181 WELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYN 240
           WELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWVSEDVFRKPT SRFCSLLDNYN
Sbjct: 181 WELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVSEDVFRKPTFSRFCSLLDNYN 240

Query: 241 PDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFD 300
           PDQGS+EVVTPEE+QEQAAFIEEISRTAPIKYLHKYLS KGVTSNDYQDFKRML  LWFD
Sbjct: 241 PDQGSKEVVTPEEKQEQAAFIEEISRTAPIKYLHKYLSYKGVTSNDYQDFKRMLTSLWFD 300

Query: 301 LYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360
           LYGRGGTS SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG
Sbjct: 301 LYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360

Query: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420
           QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN
Sbjct: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420

Query: 421 IKCYRLGNKIGSVFPVAES 430
           IKCYRLGNKIGSVFPVAES
Sbjct: 421 IKCYRLGNKIGSVFPVAES 437

[Close]

BLAST of Sed0023369 vs. ExPASy TrEMBL
Match: A0A6J1DMN3 (poly(U)-specific endoribonuclease-B-like OS=Momordica charantia OX=3673 GN=LOC111022649 PE=3 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 9.2e-216
Identity = 374/431 (86.77%), Postives = 399/431 (92.58%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNR 60
           MEGLIKG+LD+A+GH   D+N +E+SA QSRDERSRSTWAQVV+GEED GDRR GY PNR
Sbjct: 1   MEGLIKGVLDIALGH---DDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNR 60

Query: 61  KDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKK 120
           +D+EEEGRSRR+E EVEGSR SG+RQQ EY SEHG+NRN  A EE SEEKN GWETVHKK
Sbjct: 61  RDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWATEEGSEEKNDGWETVHKK 120

Query: 121 APRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRL 180
            PR+ HKVQIDNW GYKRP SEQNYSDEVE G+ELEPSEDELAD+S ACNKLWELDLNRL
Sbjct: 121 PPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRL 180

Query: 181 VPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREV 240
           VPGKDYEIDCGEGKRVSGREDMA+GCLFSWVSED FRKPT SRFCSLLDNYNPDQGSRE+
Sbjct: 181 VPGKDYEIDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREI 240

Query: 241 VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTS 300
           VT EERQEQAAF+EEISRTAPIKYLHKYLSS GVT NDYQDFKR+L  LWFDLYGRGGTS
Sbjct: 241 VTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTS 300

Query: 301 GSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQ 360
           GSSSAFEHVFVGEIK  G+Q+VSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQ
Sbjct: 301 GSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQ 360

Query: 361 LLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGN 420
           LLTIQFEWNG+LKSVSSTL+GVSPEFELALYTLCFFLGGEDNHVELGPYP+NIKCYRLGN
Sbjct: 361 LLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNHVELGPYPINIKCYRLGN 420

Query: 421 KIGSVFPVAES 430
           KIGSVFPVAES
Sbjct: 421 KIGSVFPVAES 428

[Close]

BLAST of Sed0023369 vs. ExPASy TrEMBL
Match: A0A6J1L240 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita maxima OX=3661 GN=LOC111498407 PE=3 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 1.6e-215
Identity = 383/440 (87.05%), Postives = 402/440 (91.36%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEG--------DR 60
           MEGLIKGL+DVAIGH+DD+NN+NEQSA QSRDERSRSTWAQVVTGEED          DR
Sbjct: 1   MEGLIKGLIDVAIGHDDDNNNSNEQSAPQSRDERSRSTWAQVVTGEEDADQDGGDRGHDR 60

Query: 61  RHGYDPNRKDNEEEGRSRREES-EVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKN 120
           RHG D NR+DN ++GRSRREE  EVEGSR SG+RQQ EYGSEHGYNR+Q AK+E SEE N
Sbjct: 61  RHGNDWNRRDNVKQGRSRREEEWEVEGSRISGQRQQGEYGSEHGYNRDQWAKKESSEENN 120

Query: 121 GGWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNK 180
            GWETVHKKAPRKHHKVQ++NW+GYKRPASEQNYSDEVE G+ELEPSEDELAD + ACNK
Sbjct: 121 DGWETVHKKAPRKHHKVQVENWEGYKRPASEQNYSDEVEVGAELEPSEDELADFARACNK 180

Query: 181 LWELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNY 240
           LWELDLNRLVPG+DYEIDCGEGKRV GREDMAQ  LFSWV+EDVFRKPT SRFCSLLDNY
Sbjct: 181 LWELDLNRLVPGQDYEIDCGEGKRVHGREDMAQASLFSWVNEDVFRKPTFSRFCSLLDNY 240

Query: 241 NPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWF 300
           NPDQGS+EVVTPEERQEQAAFIEEISRTAPIKYLHKYL  KGV SNDYQDFKRML  LWF
Sbjct: 241 NPDQGSKEVVTPEERQEQAAFIEEISRTAPIKYLHKYLLYKGVASNDYQDFKRMLTSLWF 300

Query: 301 DLYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360
           DLYGRGGTS SSSAFEHVFVGEIK  G Q+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRR
Sbjct: 301 DLYGRGGTSHSSSAFEHVFVGEIKQQGGQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRR 360

Query: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420
           GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV
Sbjct: 361 GQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPV 420

Query: 421 NIKCYRLGNKIGSVFPVAES 430
           NIKCYRLGNKIGSVFPVAES
Sbjct: 421 NIKCYRLGNKIGSVFPVAES 440

[Close]

BLAST of Sed0023369 vs. ExPASy TrEMBL
Match: A0A0A0L6P1 (XendoU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017000 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 5.2e-211
Identity = 372/430 (86.51%), Postives = 396/430 (92.09%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNR 60
           MEGLIKGL+DVAIG  +D +NN++QS  QSR++RSRSTWAQVVTGEED GDRR GY  NR
Sbjct: 1   MEGLIKGLIDVAIG--NDGDNNDQQSPSQSREDRSRSTWAQVVTGEEDGGDRRDGYHRNR 60

Query: 61  KDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKK 120
           ++NEEEGRSRREE EVE SR SG+R+Q EYGSEHGYNRNQ AKEE SEEKN GWETVHKK
Sbjct: 61  RNNEEEGRSRREEWEVEDSRISGQRKQSEYGSEHGYNRNQWAKEESSEEKNDGWETVHKK 120

Query: 121 APRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRL 180
             R+ HKVQ DNW GYKRPASEQNYSDEVE G+ELEPSEDELAD+S+ACNKLW+LDLNRL
Sbjct: 121 PTRRQHKVQTDNWGGYKRPASEQNYSDEVEVGAELEPSEDELADLSYACNKLWKLDLNRL 180

Query: 181 VPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREV 240
           VPGKDYEIDCGEGKRVSGREDMAQG LFSWVSE+V RKPT SRFCSLLDNYNP+QGS+EV
Sbjct: 181 VPGKDYEIDCGEGKRVSGREDMAQGSLFSWVSEEVLRKPTFSRFCSLLDNYNPNQGSKEV 240

Query: 241 VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTS 300
           VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGV SN+YQDFKRML  LWFDLYGRGGT 
Sbjct: 241 VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVASNEYQDFKRMLTSLWFDLYGRGGTC 300

Query: 301 GSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQ 360
           GSSSAFEHVFVGEIK  GEQ+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQ PDSETQ
Sbjct: 301 GSSSAFEHVFVGEIKQQGEQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQCPDSETQ 360

Query: 361 LLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGN 420
           LLTIQFEWNGVLKSVSSTLVGVSPEFE+ALYTLCFFLGGEDNHVELGPY VNIKCYR GN
Sbjct: 361 LLTIQFEWNGVLKSVSSTLVGVSPEFEVALYTLCFFLGGEDNHVELGPYAVNIKCYRFGN 420

Query: 421 KIGSVFPVAE 429
           K+GSVFP+AE
Sbjct: 421 KMGSVFPIAE 428

[Close]

BLAST of Sed0023369 vs. ExPASy TrEMBL
Match: A0A1S3BLB7 (poly(U)-specific endoribonuclease-B OS=Cucumis melo OX=3656 GN=LOC103490825 PE=3 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.2e-208
Identity = 370/430 (86.05%), Postives = 393/430 (91.40%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNR 60
           MEGLIKGL+DVAIG  +D +NN++QSA QSR+ERSRSTWAQVVTGEED GDRR G D NR
Sbjct: 1   MEGLIKGLIDVAIG--NDGDNNDQQSASQSREERSRSTWAQVVTGEEDGGDRRDGCDRNR 60

Query: 61  KDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKK 120
            +NEEEGRSRREE EVE SR SG+R+Q EYGSEHGYNRNQ AKEE SEEKN GWETVHKK
Sbjct: 61  WNNEEEGRSRREEWEVEDSRISGQRKQSEYGSEHGYNRNQWAKEEGSEEKNDGWETVHKK 120

Query: 121 APRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRL 180
             R+ HK+Q DNW GYKRPASEQNYS+EVE G+ELEPSEDELAD+S+AC KLW+LDLNRL
Sbjct: 121 PTRRQHKIQTDNWGGYKRPASEQNYSNEVEVGAELEPSEDELADLSYACKKLWQLDLNRL 180

Query: 181 VPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREV 240
           VPGKDYEIDCGEGKRVSGREDMAQG LFSWVSEDVF KPT SRFCSLLDNYNP+QG +EV
Sbjct: 181 VPGKDYEIDCGEGKRVSGREDMAQGSLFSWVSEDVFGKPTFSRFCSLLDNYNPNQGCKEV 240

Query: 241 VTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTS 300
           VTPEERQEQAAFIEEISRTAPIKYLH+YLSSKGV SNDYQDFKRML  LWFDL GR GTS
Sbjct: 241 VTPEERQEQAAFIEEISRTAPIKYLHRYLSSKGVASNDYQDFKRMLTSLWFDLCGRCGTS 300

Query: 301 GSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQ 360
           GSSSAFEHVFVGEIK  GEQ+VSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQ PDSETQ
Sbjct: 301 GSSSAFEHVFVGEIKQQGEQEVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQCPDSETQ 360

Query: 361 LLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGN 420
           LLTIQFEWNG+LKSVSSTLVGVSPEFE+ALYTLCFFLGGEDNHVELGPY VNIKCYRLGN
Sbjct: 361 LLTIQFEWNGILKSVSSTLVGVSPEFEVALYTLCFFLGGEDNHVELGPYAVNIKCYRLGN 420

Query: 421 KIGSVFPVAE 429
            IGSVFP+AE
Sbjct: 421 NIGSVFPIAE 428

[Close]

BLAST of Sed0023369 vs. TAIR 10
Match: AT4G17100.1 (CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 943 Blast hits to 770 proteins in 162 species: Archae - 0; Bacteria - 61; Metazoa - 472; Fungi - 40; Plants - 78; Viruses - 35; Other Eukaryotes - 257 (source: NCBI BLink). )

HSP 1 Score: 562.4 bits (1448), Expect = 3.2e-160
Identity = 296/440 (67.27%), Postives = 345/440 (78.41%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHND----DDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGY 60
           M+GLI+GL+DVAIG N     DD  ++E +   SRDERSRSTWA VV+GEE++ +R  G 
Sbjct: 1   MDGLIRGLVDVAIGGNQRRGGDDGGDDEGN---SRDERSRSTWANVVSGEEEDQNRAGGS 60

Query: 61  DPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSE---EKNGG 120
              R+ N EE +  ++   +    +    +  E   E+ Y      K++ SE   E+N G
Sbjct: 61  SHGRRQNSEENQWEKKGERLPTRHSQSHEEDQE---ENTYAAKVSEKQDFSESQQEENDG 120

Query: 121 WETVHKKAP-RKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKL 180
           WETV KK P R+ HKVQ + W  YKRPASEQ+YSDEVE    LEPS+ EL+ +S ACNKL
Sbjct: 121 WETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLELSGLSEACNKL 180

Query: 181 WELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYN 240
           WELDLNRLVPG+DY+IDCG+GKRV  R DMA+G LFSWVSE+V RKPT +RFCSLLDNYN
Sbjct: 181 WELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTFARFCSLLDNYN 240

Query: 241 PDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFD 300
           P++G +EVVT EERQEQAAFIEEISRT+ IKYLH+YL  K V    Y +FKRML  LWFD
Sbjct: 241 PNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLEFKRMLTSLWFD 300

Query: 301 LYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRG 360
           LYGRGGTSGSSSAFEHVFVGEIK  G +QVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRG
Sbjct: 301 LYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVDYQGYIFPRRRG 360

Query: 361 QFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVN 420
           + PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYT+CFF+G EDNH++LGPY VN
Sbjct: 361 EIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQLGPYNVN 420

Query: 421 IKCYRLG-NKIGSVFPVAES 430
           +KCYRLG N+IGS FP+AES
Sbjct: 421 VKCYRLGNNRIGSAFPIAES 434

[Close]

BLAST of Sed0023369 vs. TAIR 10
Match: AT4G17100.2 (EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). )

HSP 1 Score: 523.5 bits (1347), Expect = 1.6e-148
Identity = 282/442 (63.80%), Postives = 335/442 (75.79%), Query Frame = 0


Query: 1   MEGLIKGLLDVAIGHNDDDNNNNE------QSARQSRDERSRSTWAQVVTGEEDEGDRRH 60
           M+GLI+GL+D +   +++ N   E      ++ R +RD         VV+GEE++ +R  
Sbjct: 1   MDGLIRGLVD-STWLSEETNAAAETMVVMMKATRGTRDPDLLGLMF-VVSGEEEDQNRAG 60

Query: 61  GYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSE---EKN 120
           G    R+ N EE +  ++   +    +    +  E   E+ Y      K++ SE   E+N
Sbjct: 61  GSSHGRRQNSEENQWEKKGERLPTRHSQSHEEDQE---ENTYAAKVSEKQDFSESQQEEN 120

Query: 121 GGWETVHKKAP-RKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACN 180
            GWETV KK P R+ HKVQ + W  YKRPASEQ+YSDEVE    LEPS+ EL+ +S ACN
Sbjct: 121 DGWETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLELSGLSEACN 180

Query: 181 KLWELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDN 240
           KLWELDLNRLVPG+DY+IDCG+GKRV  R DMA+G LFSWVSE+V RKPT +RFCSLLDN
Sbjct: 181 KLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTFARFCSLLDN 240

Query: 241 YNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLW 300
           YNP++G +EVVT EERQEQAAFIEEISRT+ IKYLH+YL  K V    Y +FKRML  LW
Sbjct: 241 YNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLEFKRMLTSLW 300

Query: 301 FDLYGRGGTSGSSSAFEHVFVGEIK--GEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRR 360
           FDLYGRGGTSGSSSAFEHVFVGEIK  G +QVSGFHNWLQFYLEEAKG+VDYQGYIFPRR
Sbjct: 301 FDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVDYQGYIFPRR 360

Query: 361 RGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYP 420
           RG+ PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYT+CFF+G EDNH++LGPY 
Sbjct: 361 RGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQLGPYN 420

Query: 421 VNIKCYRLG-NKIGSVFPVAES 430
           VN+KCYRLG N+IGS FP+AES
Sbjct: 421 VNVKCYRLGNNRIGSAFPIAES 437

The following BLAST results are available for this feature:

BLAST of Sed0023369 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539783.1	1.8e-218	88.18	poly(U)-specific endoribonuclease-B [Cucurbita pepo subsp. pepo]	[more]
KAG7030180.1	1.3e-216	87.70	Poly(U)-specific endoribonuclease-B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936491.1	8.5e-216	87.47	poly(U)-specific endoribonuclease-B-like [Cucurbita moschata]	[more]
KAG6596904.1	1.5e-215	87.24	Poly(U)-specific endoribonuclease-B, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022155525.1	1.9e-215	86.77	poly(U)-specific endoribonuclease-B-like [Momordica charantia]	[more]

BLAST of Sed0023369 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q503V9	1.7e-57	43.70	Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1	[more]
Q8JFY9	2.4e-51	41.61	Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV...	[more]
B1WBB4	2.4e-51	41.03	Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV...	[more]
B1H3D5	9.0e-51	40.88	Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV...	[more]
Q1LUM3	5.4e-48	39.93	Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1	[more]

BLAST of Sed0023369 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7L9	4.1e-216	87.47	poly(U)-specific endoribonuclease-B-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DMN3	9.2e-216	86.77	poly(U)-specific endoribonuclease-B-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1L240	1.6e-215	87.05	poly(U)-specific endoribonuclease-B-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0L6P1	5.2e-211	86.51	XendoU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017000 PE=3...	[more]
A0A1S3BLB7	3.2e-208	86.05	poly(U)-specific endoribonuclease-B OS=Cucumis melo OX=3656 GN=LOC103490825 PE=3...	[more]

BLAST of Sed0023369 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17100.1	3.2e-160	67.27	CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 94...	[more]
AT4G17100.2	1.6e-148	63.80	EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018998	EndoU ribonuclease, C-terminal	PFAM	PF09412	XendoU	coord: 164..425 e-value: 2.0E-99 score: 332.2
IPR018998	EndoU ribonuclease, C-terminal	CDD	cd21159	XendoU	coord: 161..425 e-value: 6.08797E-121 score: 350.692
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..155
None	No IPR available	PANTHER	PTHR12439:SF34	SUBFAMILY NOT NAMED	coord: 46..428
IPR039787	Poly(U)-specific endoribonuclease	PANTHER	PTHR12439	PLACENTAL PROTEIN 11-RELATED	coord: 46..428
IPR037227	Endoribonuclease EndoU-like	SUPERFAMILY	142877	EndoU-like	coord: 163..427

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023369.1	Sed0023369.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0004521	endoribonuclease activity
molecular_function	GO:0008168	methyltransferase activity