Sed0023369.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCTCACTTTTTTCACACTCTCTCTGAATCTGAAAAAAAAAAAAAAAATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTACTAATGGTGTAGCAATTGAGCGATCGTAGCTTCGAATTAGTTCTTGTTTTGTGATGATTTTGGTGGTGGAATTGTTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGTCTGTTTATGGCTGGGATTATTGATTGTGGAATTGAATGTGTTTGGTGGTTTCTGTTGGATTTGGTGTGGAATTGAAATGTTTAGGGTTTTTTTGATTGGTTTTGCAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTAGATCTATTTTCTTCACCATTCTAAAAGTTGAGATCGTCTTCAAGATGATCTAATGTTGTTTCTTAGATTTAGGCATTTTGCAAGTTTAGACTCGTTTCGACATTTTATTGAAGCATATTGAATCCAGATCCGCCAACAAGAGCATAGTTCTAGAAAGACGATGTATAATCTTGTAATCAAGAGGTCGTGGGTTTAAATTCCTCCCCCATATCAATATATATATATTCTTACCTAATGGAGATTTTTTTGAATCTATATGACGGTTTCCAAAAACCATCATATTGTTAATCGTTTTAGGAAGTGTAGTTTTGGATACAATTACATAACAATTTAGTACCATTAAAAGTCTAGGCCTTGGAGTGAGTAGAGACTTTTTATTAGGAAAATATTATACCATTAAAGAAAAACAAAGACACAATATCTATTAAGACCGTGATAGGCTATTGTCTACTGGTTTTATTTTTTTGGTTTCTACCTAAAAAACTTTGTAAGAATGGAGATTGTATTATTATTTATGTATACGACCAAAATCTTATCTACTACTAATCGACGTGGGGCTGTGTTAACTGTTGATAACACATCCCTGGGGCATGTGAAGATAAAAGAATGAAACTAAATTGGGGTGGGGGTTCGAACCCGTAACCTCTTGGTTACCGGGTTATACAAGGTGCCATCGGAGTTCTGCTCTTTTGATCTTATGATTTAATTCTTATCTTGATATTGATATCACTGAAATTGCTTATTCTAGAAGGAGAACATTTTCTGCTAGTGATGATAAATACTGTCGTTTCTTATATTAGATTTGTGTTTTTGACATAACCTTTGACCAGATTCAATTGGGTGGATTGATGTTGTAAGCTATTATTTTTGGTACTTTAGTACCAATAGCAATTTCATTTCCTCCACTTTGATATAGTGCTGACTCACTTGCAAAATGGACAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGTCTGTTTTTGTTCTTTATTTCTCAGTACTGCGTTTATATCGTGAAATCGCTAAAATTTTTCACATATATGTTCAAATGGTATTAACTGCACTGTACAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTTACTTATTTCTCATGAGAAAATACTTTGATAAATACATGTTGGGTGTGTTGTTTTATATGATTTATTAGTCCAAATGTTTCTTTGGAAGAGAACTTGTAGCACAATTTCTGTTCTTTTATACAATGTTGAGTCTGAATCTGAATGTCTGACTTGGATGGTGTAGCAAAGCCTCCCAGGCAACTGTTTTATTTTTTGGTTTTTGAAAATTTTGCTTATTTTCTAATAATTTCTGTACACTAAGTTTCATCTTTCTCAAGAAAACATTTGAGTTCTTGTCAAATTTAGAAAAACAAAAACAATGTTTTTGAGAAGTATTTTTTTTTAGTTTTCGAAACTTAGATTGTTTTTTTAAAACATAGGTAAGATGTACATAAAAGCTAAGGAGACTCGTAGGTGGAAGCAATATTTATGACTTAATTTTAAAAAAATAAAATAGTTATCAGACGGATCTAAATTATTAGTTTTGTTCTTGATGCAAGGAATGTGGGTAAACATGATAATCATGGGCAGTTATAATGTTTATTTAAGAACTAAAAGTTTGTATTCTCAATTGATAATTTTGTGACATATTTAGCTACAGATTGCATAATTAATTATACATTTTACAATCATTTTAATCTCTCTTTTGGGTAAGCTGGAACCAAGTTTTCATAGAGAAAAATGAAAGAATGTACAAAAGCATACAAAAAAAATCATCTTTAATCTTCCAAGGGGTGTCCATCTAAACCCATATATTTCAATGTACTCATTTTCATTTTGACAAAAGTGGTTTTTCACCTAGTTTCTGGGCAATTTTTTCAGATTTTTGACTAGTAGTGAACTTTGAGAGGTTTCATAGTAGTTGCTTGGAGTTCAAACAATAACTCTAAAACTGACTCCTTGTGCAATAATATTTTAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGGTTAGTGCCTTATTCTGAGATTGGCTGTCACAAAACATAGTGCTAGAAATAATCTATCTGTTTAATATGTATCTAATCATTGAAGCCCTTTGACAAGGCAATAGAAACAGGGTTGGAATGGTAAATGAAAATTCTCCTTTTTAGTTTGTCTAAGGTTAAATTATATCAAAGAGTCAAGATTTTAGGATTTTCTCTCTAATTTGCTAATTTTAATAAGTCTTGCTGCACACCATGTGAATTCTGGATATGCCCCTTAAATGGCAATGAACCTACTGAGCTATGACTGAATTTCATAAAACGCTATTATATGCCTAAGATAGCATTTTTTGAATGCTATCATATGTAAATTTTCTTGTAGTGTGTTCACCCAACCCGTCAGTCTTAGACAATATTTTTAACTTGTGAAGTTGACTGAGTTTTTGTGTCTCAAATCGCTCAAATGATCTATACAACGTTTGTCTGGAAATCTAACCGGCCTAAAATTTTCTTAATATTAGAATTTTCTTTGCTGGAGTTTTCTGAACTTACCATCTTTCTTATATCTGACCTTTTGTCCATGTGCATTTATTTCAAATCTAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTGTAAGTAGCTCATCTTGAAGTATTATTTTTTGTGTATTTGATTTTGAGTTGCAAAGAAATAAATTGTGAATGCTCATGTCATGCAGCATCATTGTGGAACTTTCTTAAATTATTTGAAACTCCATCCGACTTTATCATTTAATCAGGGAAAACATTCTTGTAACTAAACCTAAAGTTACCAATAGGAAAGATGATTATAGAACAATCACTTTCATGTTCAGCATTATTCTGTATTGAAGAAACTAAATGTTTAGGCTTCGTTTGATAACCATTTTGTTTTTCGTTTTTTTTTTTTTGAAATTTAAGCCTACAACAACTACCTTATCATAACTTTTTTCTTATTTGGATGTCTCCATCTTACCTATATTTTAATAAAAAAAACTAAAATTTGGAAACAAAAAAGAGTAGCTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCAACTTTCTGATACGACCCCGAGACCGTTGAAGGTCTATTCAAAACGGAGCAAGAAGTGAGACGGAGCAAGAAGTGACGGGCTTAATTATTATTCTTTAATTTATTTATGTTAGAGTTATTTAAGTTGTATTAGGCTTTTGGTTATTTAATTAGGGTTTCTTGTAGGATTAGGAAATAGGATTAGGATTAAGATTAGGATTAGGAAATAGGATTAGGATTAGGATTAGGATTAGGAAGATGTTCTAATTCTATAAATAGGAGGAGTTAGTTCATTATTATTCATTCAGTTATCATCTTTGTACTCTGACTTTTTGAGAGATCCTCTCGAGAGAATTACCGTAGTTTAATAAAAGTGTGGTAGATTCTATCACTTTCTTAAGGAAAGATGAATATATTGTAGGAAAGATGGAGCACATAGTAGGAAATTTGAGTAGAAATAGGCTTAAATTTCATAAACAAAAAACCAAATGGTTATCAAATGGAGGCCTTGGTTATGGAGTCAAATAACTTGAACTTTTAGTGGTTACCATAAGTAAAAAAAAATTAAAAATAAACCTGCATATGCCTGATATTTTTCAGGCTATTAAATTTGTGTTGTTCCAACATGCATTAGTTCTAAGAACACTGTGAAATTCAAGAACTTGCCTCACTTTCTGGAAGATAAGCATTCCCTAATCCATTTCCTAATGATTTGTTTGATAACCATGCAGCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGAAGTTTCTTCGCTGAGATTAATCCAGTTATTTCCCTTAAATTCTTCAGTATACATCTAAGAAAAGATTGTATCATAGACTTTGAGATAATGATATCTTTAGAAGGTGAAAATGATTCTCAGGATGTATTCATTAGTTCCTAGAGGATATTGAAACTTTTGTATTATTACATGGGTCTGCAAATGGTGTCTTTCATCTCTTCCATATCTTGTAAGTGGTTGTCTTTCACTTTTATTCCCTAAACTAAATGTATATGAACCATTATCTAAATGGTAGTTTGCTTCTCACTCTTCTTGTT AACTCTCACTTTTTTCACACTCTCTCTGAATCTGAAAAAAAAAAAAAAAATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGAAGTTTCTTCGCTGAGATTAATCCAGTTATTTCCCTTAAATTCTTCAGTATACATCTAAGAAAAGATTGTATCATAGACTTTGAGATAATGATATCTTTAGAAGGTGAAAATGATTCTCAGGATGTATTCATTAGTTCCTAGAGGATATTGAAACTTTTGTATTATTACATGGGTCTGCAAATGGTGTCTTTCATCTCTTCCATATCTTGTAAGTGGTTGTCTTTCACTTTTATTCCCTAAACTAAATGTATATGAACCATTATCTAAATGGTAGTTTGCTTCTCACTCTTCTTGTT ATGGAGGGTTTAATCAAGGGTCTCTTAGATGTCGCGATCGGCCACAACGACGACGACAACAACAACAATGAACAATCGGCGCGCCAGTCTCGCGACGAGCGATCCAGATCCACTTGGGCTCAGGTGGTCACTGGGGAGGAGGACGAGGGAGATCGGCGACATGGCTATGATCCGAATCGGAAGGACAATGAGGAAGAGGGTCGGTCGCGGCGTGAGGAATCGGAGGTTGAGGGTTCGAGGAATTCTGGTCGACGGCAGCAGGTTGAATATGGTAGTGAACATGGCTACAACAGAAACCAGTGTGCTAAAGAGGAGGACTCTGAGGAGAAAAATGGTGGGTGGGAAACTGTCCACAAGAAGGCACCAAGAAAGCATCACAAGGTGCAGATAGATAATTGGGATGGATATAAACGGCCTGCCAGTGAACAAAATTACTCTGATGAGGTAGAAGCTGGTTCCGAGCTAGAACCCTCAGAAGATGAGCTAGCTGATATTTCCCATGCCTGTAACAAGCTATGGGAACTTGATTTAAATCGTTTGGTACCCGGAAAAGATTATGAAATTGATTGTGGTGAAGGGAAGAGGGTCAGTGGAAGGGAAGACATGGCACAAGGATGCCTCTTTAGTTGGGTTAGCGAAGACGTATTTAGGAAGCCAACGATTTCACGTTTTTGTTCTCTGCTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAGTTGTGACACCTGAGGAGAGGCAAGAGCAGGCAGCATTCATAGAGGAAATTAGTAGAACTGCACCAATCAAGTACCTTCATAAGTACCTTTCATCCAAGGGAGTTACATCCAATGACTATCAAGATTTTAAGCGTATGCTGAACGGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAACATCTGGTTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGGGTGAACAACAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCTAAAGGGAGTGTGGACTATCAAGGTTACATTTTCCCCCGGCGACGAGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTCTCAAGCACTTTAGTAGGAGTTAGCCCTGAGTTTGAACTTGCACTCTATACACTATGCTTCTTCCTTGGTGGAGAGGATAACCATGTCGAGCTCGGACCATATCCTGTTAATATCAAGTGTTACCGATTAGGAAACAAAATCGGGTCTGTGTTTCCCGTAGCAGAGTCTTGA MEGLIKGLLDVAIGHNDDDNNNNEQSARQSRDERSRSTWAQVVTGEEDEGDRRHGYDPNRKDNEEEGRSRREESEVEGSRNSGRRQQVEYGSEHGYNRNQCAKEEDSEEKNGGWETVHKKAPRKHHKVQIDNWDGYKRPASEQNYSDEVEAGSELEPSEDELADISHACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMAQGCLFSWVSEDVFRKPTISRFCSLLDNYNPDQGSREVVTPEERQEQAAFIEEISRTAPIKYLHKYLSSKGVTSNDYQDFKRMLNGLWFDLYGRGGTSGSSSAFEHVFVGEIKGEQQVSGFHNWLQFYLEEAKGSVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTLCFFLGGEDNHVELGPYPVNIKCYRLGNKIGSVFPVAES Homology
BLAST of Sed0023369.1 vs. NCBI nr
Match: XP_023539783.1 (poly(U)-specific endoribonuclease-B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 769.2 bits (1985), Expect = 1.8e-218 Identity = 388/440 (88.18%), Postives = 405/440 (92.05%), Query Frame = 0
BLAST of Sed0023369.1 vs. NCBI nr
Match: KAG7030180.1 (Poly(U)-specific endoribonuclease-B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 763.1 bits (1969), Expect = 1.3e-216 Identity = 385/439 (87.70%), Postives = 403/439 (91.80%), Query Frame = 0
BLAST of Sed0023369.1 vs. NCBI nr
Match: XP_022936491.1 (poly(U)-specific endoribonuclease-B-like [Cucurbita moschata]) HSP 1 Score: 760.4 bits (1962), Expect = 8.5e-216 Identity = 384/439 (87.47%), Postives = 402/439 (91.57%), Query Frame = 0
BLAST of Sed0023369.1 vs. NCBI nr
Match: KAG6596904.1 (Poly(U)-specific endoribonuclease-B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 759.6 bits (1960), Expect = 1.5e-215 Identity = 383/439 (87.24%), Postives = 402/439 (91.57%), Query Frame = 0
BLAST of Sed0023369.1 vs. NCBI nr
Match: XP_022155525.1 (poly(U)-specific endoribonuclease-B-like [Momordica charantia]) HSP 1 Score: 759.2 bits (1959), Expect = 1.9e-215 Identity = 374/431 (86.77%), Postives = 399/431 (92.58%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy Swiss-Prot
Match: Q503V9 (Poly(U)-specific endoribonuclease-B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.7e-57 Identity = 118/270 (43.70%), Postives = 156/270 (57.78%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy Swiss-Prot
Match: Q8JFY9 (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51 Identity = 114/274 (41.61%), Postives = 152/274 (55.47%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy Swiss-Prot
Match: B1WBB4 (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis OX=8355 GN=endou-b PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51 Identity = 112/273 (41.03%), Postives = 153/273 (56.04%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy Swiss-Prot
Match: B1H3D5 (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.0e-51 Identity = 112/274 (40.88%), Postives = 151/274 (55.11%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy Swiss-Prot
Match: Q1LUM3 (Poly(U)-specific endoribonuclease-C OS=Danio rerio OX=7955 GN=endouc PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.4e-48 Identity = 109/273 (39.93%), Postives = 154/273 (56.41%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy TrEMBL
Match: A0A6J1F7L9 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita moschata OX=3662 GN=LOC111443088 PE=3 SV=1) HSP 1 Score: 760.4 bits (1962), Expect = 4.1e-216 Identity = 384/439 (87.47%), Postives = 402/439 (91.57%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy TrEMBL
Match: A0A6J1DMN3 (poly(U)-specific endoribonuclease-B-like OS=Momordica charantia OX=3673 GN=LOC111022649 PE=3 SV=1) HSP 1 Score: 759.2 bits (1959), Expect = 9.2e-216 Identity = 374/431 (86.77%), Postives = 399/431 (92.58%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy TrEMBL
Match: A0A6J1L240 (poly(U)-specific endoribonuclease-B-like OS=Cucurbita maxima OX=3661 GN=LOC111498407 PE=3 SV=1) HSP 1 Score: 758.4 bits (1957), Expect = 1.6e-215 Identity = 383/440 (87.05%), Postives = 402/440 (91.36%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy TrEMBL
Match: A0A0A0L6P1 (XendoU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017000 PE=3 SV=1) HSP 1 Score: 743.4 bits (1918), Expect = 5.2e-211 Identity = 372/430 (86.51%), Postives = 396/430 (92.09%), Query Frame = 0
BLAST of Sed0023369.1 vs. ExPASy TrEMBL
Match: A0A1S3BLB7 (poly(U)-specific endoribonuclease-B OS=Cucumis melo OX=3656 GN=LOC103490825 PE=3 SV=1) HSP 1 Score: 734.2 bits (1894), Expect = 3.2e-208 Identity = 370/430 (86.05%), Postives = 393/430 (91.40%), Query Frame = 0
BLAST of Sed0023369.1 vs. TAIR 10
Match: AT4G17100.1 (CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 943 Blast hits to 770 proteins in 162 species: Archae - 0; Bacteria - 61; Metazoa - 472; Fungi - 40; Plants - 78; Viruses - 35; Other Eukaryotes - 257 (source: NCBI BLink). ) HSP 1 Score: 562.4 bits (1448), Expect = 3.2e-160 Identity = 296/440 (67.27%), Postives = 345/440 (78.41%), Query Frame = 0
BLAST of Sed0023369.1 vs. TAIR 10
Match: AT4G17100.2 (EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). ) HSP 1 Score: 523.5 bits (1347), Expect = 1.6e-148 Identity = 282/442 (63.80%), Postives = 335/442 (75.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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