Homology
BLAST of Sed0020593 vs. NCBI nr
Match:
KAG7030515.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1030.8 bits (2664), Expect = 4.6e-297
Identity = 506/589 (85.91%), Postives = 544/589 (92.36%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF
Sbjct: 7 KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ +S A ARPF DR++IRNPEAWLVKVVCTLFFRSH LN +CFGYLSRNLNPSI
Sbjct: 67 IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRAD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSSIVE+LV SY+R+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYSRLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVN++ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNDVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAGMP+EASQIKQAA ENLN LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGMPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594
BLAST of Sed0020593 vs. NCBI nr
Match:
XP_022946631.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1027.7 bits (2656), Expect = 3.9e-296
Identity = 506/589 (85.91%), Postives = 542/589 (92.02%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF
Sbjct: 7 KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ +S A ARPF DR++IRNPEAWLVKVVCTLFFRSH +N +CFGYLSRNLNPSI
Sbjct: 67 IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSIN-ACFGYLSRNLNPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVNE+ KGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLIDGFGKAG+MR AL M+EKMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAG P+EASQIKQAA ENLN LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594
BLAST of Sed0020593 vs. NCBI nr
Match:
XP_023546864.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1022.3 bits (2642), Expect = 1.6e-294
Identity = 502/589 (85.23%), Postives = 541/589 (91.85%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF
Sbjct: 7 KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ +S A ARPF DR++IRNPEAWLVKVVCTLFFRSH LN +CFGYLSRNLNPSI
Sbjct: 67 IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMRAASELFDEMVSSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+M+VRDLSPNVYTYAVLINALCKENRI+EARNFLR LK E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMEVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEMQEK+C PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKRCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAGMP+EASQIKQAA ENLN L SL++PLT KS CVPVA+
Sbjct: 547 NSLISCLLKAGMPDEASQIKQAAFENLNFDLSSLKNPLTTKSSCVPVAI 594
BLAST of Sed0020593 vs. NCBI nr
Match:
XP_022999210.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1018.8 bits (2633), Expect = 1.8e-293
Identity = 502/590 (85.08%), Postives = 541/590 (91.69%), Query Frame = 0
Query: 1 MKQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNF 60
+KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RA RFR SNF
Sbjct: 6 LKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRFRASNF 65
Query: 61 SIAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPS 120
IAQ +S A ARPF DR++IRNPE+WLVKVVCTLFFRSH LN +CFGYLSRNLNPS
Sbjct: 66 FIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPS 125
Query: 121 IAFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRS 180
IAFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+
Sbjct: 126 IAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRT 185
Query: 181 DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDE 240
DGI PDSSIVE+LV SYA++GKLD+ K FL+E+HCYGIKV P +YNN LNMLVKQ+QVDE
Sbjct: 186 DGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQNQVDE 245
Query: 241 AVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLIN 300
AVLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLIN
Sbjct: 246 AVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLIN 305
Query: 301 GFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIK 360
GFCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IK
Sbjct: 306 GFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 365
Query: 361 PNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKL 420
PNDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKL
Sbjct: 366 PNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKL 425
Query: 421 WEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCK 480
WE+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LK E+VPKPFIYNPVIDGFCK
Sbjct: 426 WEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCK 485
Query: 481 AGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEIT 540
AG+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEIT
Sbjct: 486 AGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEIT 545
Query: 541 ISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
I+SLISCLLKAGMP+EASQIKQAALE LN LLSL++PLT KS CVPVA+
Sbjct: 546 INSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLTIKSSCVPVAI 594
BLAST of Sed0020593 vs. NCBI nr
Match:
XP_038890050.1 (pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida])
HSP 1 Score: 1017.7 bits (2630), Expect = 4.0e-293
Identity = 504/589 (85.57%), Postives = 541/589 (91.85%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
KQ S+T+S RP+R PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+R YRFR SNFS
Sbjct: 7 KQISDTQSERPSRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRTYRFRASNFS 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ +S A ARPF DR+++RNPE WLVKVVCTLFFRS LN +CFGYLSRNLNPSI
Sbjct: 67 IAQFYSLADGVSRARPFCDREVLRNPETWLVKVVCTLFFRSISLN-ACFGYLSRNLNPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRFRDPLLG KFFEFSRTHLSI HTF TYDLL+R+LCQMGL+DSAK+VFDCMRSD
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSIKHTFNTYDLLVRNLCQMGLNDSAKIVFDCMRSD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSSIVEL+V SYA+MGKLDS K FL EVH YGIKVSP +YNNLLNMLVKQ+ VDEA
Sbjct: 187 GILPDSSIVELMVSSYAQMGKLDSAKNFLNEVHRYGIKVSPFVYNNLLNMLVKQNLVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+ VPDVY+FNILIRGLC IG+I KAFEF ++MGNFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYLVPDVYSFNILIRGLCRIGKIDKAFEFFQNMGNFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVNEI KGHDLLKEV S+KGVSPDV+TYTS+ISGYCKLGDMKAAS+LFDEMVSS IKP
Sbjct: 307 FCRVNEISKGHDLLKEVLSIKGVSPDVVTYTSLISGYCKLGDMKAASDLFDEMVSSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLIDGFGK G+MRSALVM+EKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKVGNMRSALVMYEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+MKVR+LSPNVYTYAVLINALCKENRI+EAR+FLR LK EVVPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRNLSPNVYTYAVLINALCKENRIQEARSFLRHLKVSEVVPKPFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI FYKMLE CIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMLEVNCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAGMPNEASQIKQAA+ENLNLGLLSL SPLT+KS CVPVAV
Sbjct: 547 NSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLGSPLTKKSSCVPVAV 594
BLAST of Sed0020593 vs. ExPASy Swiss-Prot
Match:
Q9ZUE9 (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX=3702 GN=At2g06000 PE=2 SV=1)
HSP 1 Score: 557.0 bits (1434), Expect = 2.6e-157
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0
Query: 61 SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
+IA H+ + ARP + R++I PEAWLVK+V TLF + CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
P I+FEV+K+ +P +GF+F+EFSR L+I H+F TY+LL RSLC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
M+SDG+ P++ ++ LV S+A GKL L + + ++ ++ N+LLN LVK +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
V++A+ LF EHL D TFNILIRGLCG+G+ KA E L M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
LI GFC+ NE+ K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
I P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
+LWE+M R + PN +TY++LINALC ENR+ +AR L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
+IT+SSL+SCLLKAGM EA + Q A + + ++ L + +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533
BLAST of Sed0020593 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 267.7 bits (683), Expect = 3.1e-70
Identity = 157/480 (32.71%), Postives = 254/480 (52.92%), Query Frame = 0
Query: 107 YLSRNLNPSIAFE-VIKRFRDPLLGFKFFEFSRTH--------------LSINHTFKTYD 166
+LS N P A ++K D L KF ++ H L+ +KT
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100
Query: 167 LLMRSLCQMGLHDS-AKVVFDCMRS--DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 226
+L + L D A +VF ++ D + SS+ +L+V SY+R+ +D +
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160
Query: 227 HCYGIKVSPLLYNNLLNMLVK-QHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGE 286
+G L YN +L+ ++ + + A +F+E LE P+V+T+NILIRG C G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 287 IGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYT 346
I A M GC P++V+YNTLI+G+C++ +I G LL+ + +LKG+ P++I+Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280
Query: 347 SIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLL 406
+I+G C+ G MK S + EM ++ T+N LI G+ K G+ ALVMH +ML
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340
Query: 407 GCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEA 466
G P V+T TSLI C+AG +N+ ++ + M+VR L PN TY L++ ++ + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400
Query: 467 RNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIG 526
LR++ P YN +I+G C G++++A ++ +M+EK SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460
Query: 527 NCMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAGMPNEASQIKQAALENLNLGL 568
C + EA+R+ +M+E PD IT SSLI + EA + + E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516
BLAST of Sed0020593 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 1.5e-61
Identity = 137/399 (34.34%), Postives = 217/399 (54.39%), Query Frame = 0
Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
TY+ ++ C++G + A + G+ PD L+ Y + LDS E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
G + + + Y +L++ L ++DEA+ LF + + P V T+ +LI+ LCG
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
+A ++ M G P+I +Y LI+ C + K +LL ++ KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399
Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
+I+GYCK G ++ A ++ + M S + PN T+N LI G+ K+ ++ A+ + KML
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459
Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
PDVVT SLIDG CR+G + +L M R L P+ +TY +I++LCK R+EEA
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519
Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
+ L+ V P +Y +IDG+CKAG+VDEA+ ++ +M K C P+ +TF LI G
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579
Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAG 548
C G++ EA + KM++ P T + LI LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
BLAST of Sed0020593 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 4.5e-61
Identity = 126/374 (33.69%), Postives = 208/374 (55.61%), Query Frame = 0
Query: 148 KTYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEE 207
KT+ +M+ + G D A + + M G + V ++V + + G+++ F++E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 208 V-HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIG 267
+ + G +N L+N L K V A+ + L+ + PDVYT+N +I GLC +G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 268 EIGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITY 327
E+ +A E L M C P+ V+YNTLI+ C+ N++ + +L + + S KG+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTF 404
Query: 328 TSIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLL 387
S+I G C + + A ELF+EM S +P++FT+N+LID G + AL M ++M L
Sbjct: 405 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 464
Query: 388 LGCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEE 447
GC V+T +LIDG+C+A + + +++++M+V +S N TY LI+ LCK R+E+
Sbjct: 465 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 524
Query: 448 ARNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILII 507
A + Q+ P + YN ++ FC+ G + +A IV M C PD +T+ LI
Sbjct: 525 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 584
Query: 508 GNCMKGRMIEAIRI 521
G C GR+ A ++
Sbjct: 585 GLCKAGRVEVASKL 597
BLAST of Sed0020593 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 4.2e-59
Identity = 126/392 (32.14%), Postives = 201/392 (51.28%), Query Frame = 0
Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
+Y++++ +CQ+G A + M G PD +V Y R G+LD V +E +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
G+K P+ Y + +I LC I ++
Sbjct: 308 KRKGLK-----------------------------------PNSYIYGSIIGLLCRICKL 367
Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
+A E M G PD V Y TLI+GFC+ +I E+ S + ++PDV+TYT+
Sbjct: 368 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTA 427
Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
IISG+C++GDM A +LF EM ++P+ TF LI+G+ KAG M+ A +H M+ G
Sbjct: 428 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 487
Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
C P+VVT T+LIDG C+ G+++ +L +M L PN++TY ++N LCK IEEA
Sbjct: 488 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 547
Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
+ + ++ + Y ++D +CK+G +D+A I+ EM K P +TF +L+ G
Sbjct: 548 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 603
Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLI 541
C+ G + + ++ ML P+ T +SL+
Sbjct: 608 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
BLAST of Sed0020593 vs. ExPASy TrEMBL
Match:
A0A6J1G470 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450639 PE=4 SV=1)
HSP 1 Score: 1027.7 bits (2656), Expect = 1.9e-296
Identity = 506/589 (85.91%), Postives = 542/589 (92.02%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF
Sbjct: 7 KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ +S A ARPF DR++IRNPEAWLVKVVCTLFFRSH +N +CFGYLSRNLNPSI
Sbjct: 67 IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSIN-ACFGYLSRNLNPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVNE+ KGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLIDGFGKAG+MR AL M+EKMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAG P+EASQIKQAA ENLN LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594
BLAST of Sed0020593 vs. ExPASy TrEMBL
Match:
A0A6J1KES2 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493657 PE=4 SV=1)
HSP 1 Score: 1018.8 bits (2633), Expect = 8.8e-294
Identity = 502/590 (85.08%), Postives = 541/590 (91.69%), Query Frame = 0
Query: 1 MKQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNF 60
+KQES T+S PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RA RFR SNF
Sbjct: 6 LKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRFRASNF 65
Query: 61 SIAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPS 120
IAQ +S A ARPF DR++IRNPE+WLVKVVCTLFFRSH LN +CFGYLSRNLNPS
Sbjct: 66 FIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPS 125
Query: 121 IAFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRS 180
IAFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+
Sbjct: 126 IAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRT 185
Query: 181 DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDE 240
DGI PDSSIVE+LV SYA++GKLD+ K FL+E+HCYGIKV P +YNN LNMLVKQ+QVDE
Sbjct: 186 DGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQNQVDE 245
Query: 241 AVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLIN 300
AVLLFREHLEP+F PDVYTFNILIRGLC IGE KAFE+L++M NFGCFPDIVSYNTLIN
Sbjct: 246 AVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLIN 305
Query: 301 GFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIK 360
GFCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IK
Sbjct: 306 GFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 365
Query: 361 PNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKL 420
PNDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKL
Sbjct: 366 PNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKL 425
Query: 421 WEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCK 480
WE+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LK E+VPKPFIYNPVIDGFCK
Sbjct: 426 WEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCK 485
Query: 481 AGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEIT 540
AG+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEIT
Sbjct: 486 AGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEIT 545
Query: 541 ISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
I+SLISCLLKAGMP+EASQIKQAALE LN LLSL++PLT KS CVPVA+
Sbjct: 546 INSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLTIKSSCVPVAI 594
BLAST of Sed0020593 vs. ExPASy TrEMBL
Match:
A0A6J1DMW0 (pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=3673 GN=LOC111021880 PE=4 SV=1)
HSP 1 Score: 1011.1 bits (2613), Expect = 1.8e-291
Identity = 496/589 (84.21%), Postives = 536/589 (91.00%), Query Frame = 0
Query: 2 KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
+QES+T+S RP+R PGCKR RIVIEN+WEDRAE SDGVGLQMTLLFFS+RAYRFR S+FS
Sbjct: 7 EQESDTQSERPDRIPGCKRTRIVIENLWEDRAESSDGVGLQMTLLFFSSRAYRFRASSFS 66
Query: 62 IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
IAQ HSF AR F+DR++IRNPEAWL KVVCTLFFRSH LN CFGYLSRNL PSI
Sbjct: 67 IAQFHSFTDGGSRARSFYDREVIRNPEAWLAKVVCTLFFRSHSLN-GCFGYLSRNLTPSI 126
Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
AFEVIKRF+DP+LG KFFEFSR HLSINH+F TYDLLMR+LCQMGLH SAK+VFDCMR D
Sbjct: 127 AFEVIKRFKDPILGLKFFEFSRAHLSINHSFNTYDLLMRNLCQMGLHGSAKMVFDCMRCD 186
Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
GI PDSS+VELLV SYA+MGKLDS K+FL EVHCYGIKVSP +YNNLLN+LVKQ+QVDEA
Sbjct: 187 GILPDSSVVELLVSSYAQMGKLDSAKIFLNEVHCYGIKVSPFVYNNLLNLLVKQNQVDEA 246
Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
VLLFREHLEP+F+PD YTFNI+IRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFIPDAYTFNIIIRGLCRIGEIHKAFEFFQNMGNFGCFPDIVSYNTLING 306
Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
FCRVNEI KGHDLLKEVQS+KGV+PDVITYTSIISGYCKLGDMKAAS L DEMV S IKP
Sbjct: 307 FCRVNEISKGHDLLKEVQSVKGVAPDVITYTSIISGYCKLGDMKAASGLLDEMVGSGIKP 366
Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
NDFTFNVLI GFGK GDM SAL M+EKMLLLGCPPDVVT+TSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIHGFGKVGDMISALAMYEKMLLLGCPPDVVTLTSLIDGYCRAGEVNQGLKLW 426
Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
E+MKVR LSPNVYTYAVLINALCKENRI+EAR FLR LK EVVPK FIYNPVIDGFCKA
Sbjct: 427 EEMKVRGLSPNVYTYAVLINALCKENRIQEARFFLRHLKLSEVVPKTFIYNPVIDGFCKA 486
Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
G+VDEAN IVAEM+EKKCSPDKITFTILIIGNCM+GRM+EAI IFYKMLET CIPDEITI
Sbjct: 487 GKVDEANVIVAEMREKKCSPDKITFTILIIGNCMQGRMVEAISIFYKMLETNCIPDEITI 546
Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
+SLISCLLKAGMPNEASQIKQAA+ENLNLGLLSLR+PL RK CVP+AV
Sbjct: 547 NSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLRNPLVRKPSCVPIAV 594
BLAST of Sed0020593 vs. ExPASy TrEMBL
Match:
A0A5A7V6K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001250 PE=4 SV=1)
HSP 1 Score: 988.8 bits (2555), Expect = 9.7e-285
Identity = 495/588 (84.18%), Postives = 531/588 (90.31%), Query Frame = 0
Query: 3 QESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFSI 62
+ESE +S RP CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFS+RAYR R SNFSI
Sbjct: 4 RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63
Query: 63 AQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSIA 122
+Q +S A ARPF DR++IRN EAWLVKVVCTLF RSH LN +CFGYLSRNLNPSIA
Sbjct: 64 SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLN-ACFGYLSRNLNPSIA 123
Query: 123 FEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSDG 182
FEVIKRFRDPLLG KFFEFSR HLSINHTF TYDLLMR+LC++GL+DSAK+VFDCMRSDG
Sbjct: 124 FEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 183
Query: 183 IFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEAV 242
I PDSSI+ELLV SYARMGKLDS K FL EVHCYGIKVSP +YNNLLNMLVKQ+ VDEAV
Sbjct: 184 ISPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 243
Query: 243 LLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLINGF 302
LFREHLEP+FVPDVY+FNILIRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLINGF
Sbjct: 244 SLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 303
Query: 303 CRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKPN 362
CRVNEI KGHDLLKEV +KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKPN
Sbjct: 304 CRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 363
Query: 363 DFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLWE 422
+FTFNVLIDGFGK G+MRSA+VM+EKMLLLGCPPDVVTVTSLIDGYCR GEVNQGLKLWE
Sbjct: 364 NFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWE 423
Query: 423 DMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKAG 482
+MK+R+LSPNVYTYAVLINALCKENRI+EARNFLR LKS EVVPKPFIYNPVID FCKAG
Sbjct: 424 EMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 483
Query: 483 RVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITIS 542
+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI FYKM+E CIPDEITI+
Sbjct: 484 QVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITIN 543
Query: 543 SLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
SLISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LTRKS VPVAV
Sbjct: 544 SLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKSSSVPVAV 587
BLAST of Sed0020593 vs. ExPASy TrEMBL
Match:
A0A1S3CB42 (pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN=LOC103498823 PE=4 SV=1)
HSP 1 Score: 988.0 bits (2553), Expect = 1.7e-284
Identity = 494/588 (84.01%), Postives = 530/588 (90.14%), Query Frame = 0
Query: 3 QESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFSI 62
+ESE +S RP CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFS+RAYR R SNFSI
Sbjct: 4 RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63
Query: 63 AQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSIA 122
+Q +S A ARPF DR++IRN EAWLVKVVCTLF RSH LN +CFGYLSRNLNPSIA
Sbjct: 64 SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLN-ACFGYLSRNLNPSIA 123
Query: 123 FEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSDG 182
FEVIKRFRDPLLG KFFEFSR HLSINHTF TYDLLMR+LC++GL+DSAK+VFDCMRSDG
Sbjct: 124 FEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 183
Query: 183 IFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEAV 242
I PDSSI+ELLV SYARMGK DS K FL EVHCYGIKVSP +YNNLLNMLVKQ+ VDEAV
Sbjct: 184 ILPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 243
Query: 243 LLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLINGF 302
LFREHLEP+FVPDVY+FNILIRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLINGF
Sbjct: 244 SLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 303
Query: 303 CRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKPN 362
CRVNEI KGHDLLKEV +KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKPN
Sbjct: 304 CRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 363
Query: 363 DFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLWE 422
+FTFNVLIDGFGK G+MRSA+VM+EKMLLLGCPPDVVTVTSLIDGYCR GEVNQGLKLWE
Sbjct: 364 NFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWE 423
Query: 423 DMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKAG 482
+MK+R+LSPNVYTYAVLINALCKENRI+EARNFLR LKS EVVPKPFIYNPVID FCKAG
Sbjct: 424 EMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 483
Query: 483 RVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITIS 542
+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI FYKM+E CIPDEITI+
Sbjct: 484 QVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITIN 543
Query: 543 SLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
SLISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LTRKS VPVAV
Sbjct: 544 SLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKSSSVPVAV 587
BLAST of Sed0020593 vs. TAIR 10
Match:
AT2G06000.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 557.0 bits (1434), Expect = 1.8e-158
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0
Query: 61 SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
+IA H+ + ARP + R++I PEAWLVK+V TLF + CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
P I+FEV+K+ +P +GF+F+EFSR L+I H+F TY+LL RSLC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
M+SDG+ P++ ++ LV S+A GKL L + + ++ ++ N+LLN LVK +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
V++A+ LF EHL D TFNILIRGLCG+G+ KA E L M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
LI GFC+ NE+ K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
I P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
+LWE+M R + PN +TY++LINALC ENR+ +AR L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
+IT+SSL+SCLLKAGM EA + Q A + + ++ L + +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533
BLAST of Sed0020593 vs. TAIR 10
Match:
AT2G06000.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 557.0 bits (1434), Expect = 1.8e-158
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0
Query: 61 SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
+IA H+ + ARP + R++I PEAWLVK+V TLF + CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
P I+FEV+K+ +P +GF+F+EFSR L+I H+F TY+LL RSLC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
M+SDG+ P++ ++ LV S+A GKL L + + ++ ++ N+LLN LVK +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
V++A+ LF EHL D TFNILIRGLCG+G+ KA E L M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
LI GFC+ NE+ K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
I P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
+LWE+M R + PN +TY++LINALC ENR+ +AR L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
+IT+SSL+SCLLKAGM EA + Q A + + ++ L + +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533
BLAST of Sed0020593 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 267.7 bits (683), Expect = 2.2e-71
Identity = 157/480 (32.71%), Postives = 254/480 (52.92%), Query Frame = 0
Query: 107 YLSRNLNPSIAFE-VIKRFRDPLLGFKFFEFSRTH--------------LSINHTFKTYD 166
+LS N P A ++K D L KF ++ H L+ +KT
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100
Query: 167 LLMRSLCQMGLHDS-AKVVFDCMRS--DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 226
+L + L D A +VF ++ D + SS+ +L+V SY+R+ +D +
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160
Query: 227 HCYGIKVSPLLYNNLLNMLVK-QHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGE 286
+G L YN +L+ ++ + + A +F+E LE P+V+T+NILIRG C G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 287 IGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYT 346
I A M GC P++V+YNTLI+G+C++ +I G LL+ + +LKG+ P++I+Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280
Query: 347 SIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLL 406
+I+G C+ G MK S + EM ++ T+N LI G+ K G+ ALVMH +ML
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340
Query: 407 GCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEA 466
G P V+T TSLI C+AG +N+ ++ + M+VR L PN TY L++ ++ + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400
Query: 467 RNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIG 526
LR++ P YN +I+G C G++++A ++ +M+EK SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460
Query: 527 NCMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAGMPNEASQIKQAALENLNLGL 568
C + EA+R+ +M+E PD IT SSLI + EA + + E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516
BLAST of Sed0020593 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 238.8 bits (608), Expect = 1.1e-62
Identity = 137/399 (34.34%), Postives = 217/399 (54.39%), Query Frame = 0
Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
TY+ ++ C++G + A + G+ PD L+ Y + LDS E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
G + + + Y +L++ L ++DEA+ LF + + P V T+ +LI+ LCG
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
+A ++ M G P+I +Y LI+ C + K +LL ++ KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399
Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
+I+GYCK G ++ A ++ + M S + PN T+N LI G+ K+ ++ A+ + KML
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459
Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
PDVVT SLIDG CR+G + +L M R L P+ +TY +I++LCK R+EEA
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519
Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
+ L+ V P +Y +IDG+CKAG+VDEA+ ++ +M K C P+ +TF LI G
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579
Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAG 548
C G++ EA + KM++ P T + LI LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
BLAST of Sed0020593 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 237.3 bits (604), Expect = 3.2e-62
Identity = 126/374 (33.69%), Postives = 208/374 (55.61%), Query Frame = 0
Query: 148 KTYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEE 207
KT+ +M+ + G D A + + M G + V ++V + + G+++ F++E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 208 V-HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIG 267
+ + G +N L+N L K V A+ + L+ + PDVYT+N +I GLC +G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 268 EIGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITY 327
E+ +A E L M C P+ V+YNTLI+ C+ N++ + +L + + S KG+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTF 404
Query: 328 TSIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLL 387
S+I G C + + A ELF+EM S +P++FT+N+LID G + AL M ++M L
Sbjct: 405 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 464
Query: 388 LGCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEE 447
GC V+T +LIDG+C+A + + +++++M+V +S N TY LI+ LCK R+E+
Sbjct: 465 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 524
Query: 448 ARNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILII 507
A + Q+ P + YN ++ FC+ G + +A IV M C PD +T+ LI
Sbjct: 525 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 584
Query: 508 GNCMKGRMIEAIRI 521
G C GR+ A ++
Sbjct: 585 GLCKAGRVEVASKL 597
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7030515.1 | 4.6e-297 | 85.91 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022946631.1 | 3.9e-296 | 85.91 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita mosc... | [more] |
XP_023546864.1 | 1.6e-294 | 85.23 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo... | [more] |
XP_022999210.1 | 1.8e-293 | 85.08 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxi... | [more] |
XP_038890050.1 | 4.0e-293 | 85.57 | pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUE9 | 2.6e-157 | 52.94 | Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 3.1e-70 | 32.71 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 1.5e-61 | 34.34 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 4.5e-61 | 33.69 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q0WVK7 | 4.2e-59 | 32.14 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G470 | 1.9e-296 | 85.91 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1KES2 | 8.8e-294 | 85.08 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1DMW0 | 1.8e-291 | 84.21 | pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=... | [more] |
A0A5A7V6K1 | 9.7e-285 | 84.18 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CB42 | 1.7e-284 | 84.01 | pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT2G06000.1 | 1.8e-158 | 52.94 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G06000.2 | 1.8e-158 | 52.94 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 2.2e-71 | 32.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G65560.1 | 1.1e-62 | 34.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 3.2e-62 | 33.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |