Sed0020593.1 (mRNA) Chayote v1

Overview


Name	Sed0020593.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG03: 12092098 .. 12096289 (+)
Sequence length	3732
RNA-Seq Expression	Sed0020593.1
Synteny	Sed0020593.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAAACGCAGGGGGTCGAAATCGAGGACTCATTTGATTCGCAGCTCTATCGTCTCCTTCAAATTCCAGAGATTTTGCATCATCAAACACCGATTGATCGGAATTCACACTCCCATTTCCGGTTCCAATTTCTACTTATTCCGCGATTTTGCAACTTCCATCAACCCCCATTTCGAGCTCCGATCGATTTGAATGGATTCACATTAGCTATGCGAATTAGATTGTGTATTTCGTTCATTTCATGAAGCAAGAATCGGAGACAAAATCTGCGAGACCCAACAGAAAACCTGGGTGCAAACGACCAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCCGAGCCCAGCGATGGCGTCGGGCTGCAAATGACCCTCTTATTCTTCTCTACTCGTGCCTACAGGTTTCGACCCTCCAATTTCTCCATTGCCCAGATTCACAGCTTTGCCGCTCGACCCTTTTTTGATCGAGATTTGATACGAAACCCGGAAGCATGGCTGGTGAAGGTTGTTTGTACTCTCTTTTTTCGATCGCATTATCTGAATTCTTCTTGCTTTGGTTATCTTAGTAGGAACTTGAACCCTTCCATTGCTTTTGAGGTTATCAAGCGGTTTAGAGATCCGTTGTTGGGGTTTAAGTTTTTTGAGTTTAGTAGAACGCATTTGAGCATTAATCATACTTTTAAGACTTATGATTTACTCATGAGGAGTCTTTGTCAAATGGGTCTTCATGATTCTGCTAAAGTCGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTTGAACTCTTGGTGTTTTCGTATGCTCGAATGGGGAAGTTGGATTCTGTGAAAATGTTTCTCGAGGAGGTTCATTGTTATGGTATTAAAGTGAGTCCTCTTTTATACAATAACTTGTTGAATATGTTGGTCAAGCAGCACCAAGTAGATGAAGCTGTCTTACTTTTCAGAGAGCACTTGGAACCACATTTTGTTCCAGACGTTTACACTTTCAATATTCTAATTAGAGGGTTGTGCGGGATAGGAGAAATTGGTAAGGCGTTTGAGTTTTTGCGGAGTATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACACTTATAAATGGGTTTTGTAGGGTTAATGAGATTATTAAAGGGCATGATTTGCTAAAAGAAGTTCAGTCATTAAAAGGGGTTTCCCCAGATGTTATAACCTACACATCAATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTCGATGAGATGGTTAGTTCGGCAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTTATGCATGAGAAAATGCTTCTTCTTGGCTGTCCACCAGATGTGGTCACGGTCACTTCCCTGATTGATGGCTATTGCCGCGCAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAAGATATGAAAGTAAGGGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGCAAGGAAAATAGAATAGAGGAGGCCAGAAATTTTTTGAGGCAGTTGAAATCGATGGAGGTTGTTCCTAAACCATTCATTTATAATCCTGTAATCGATGGATTTTGCAAGGCTGGGAGGGTGGATGAGGCAAATGGCATTGTAGCTGAGATGCAGGAGAAGAAATGCAGCCCCGACAAGATAACATTTACTATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGATTGAAGCAATTAGGATATTTTACAAGATGTTGGAAACCAAATGTATTCCAGATGAAATAACTATTAGTTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATAAAACAAGCTGCCTTAGAGAACCTGAACTTGGGTTTGTTATCCTTGAGAAGTCCGCTTACAAGAAAATCTTTGTGTGTTCCAGTTGCTGTTTGATGAAGTCTATTATGAAGGTGAACAAAGAATTTTTGGCTTGTAACGACTGAGAAACGTTCTCTTCTTCTGTGCCAGATCACAAAATAAGCAAGCAAAGGCAGAGACAAATAGCTTTATAGATGGTTAGTACATGTACAATACCCACCCACATAAAAAAAAACTGTAGTTTTTGTCATACAAAAAGTGAATGGTACCTATTGTGTGGCTCACTGCACATTGTGCTTGTTGAACCTGGGATGCCTTTTCTTTGGGAAAGCCACTCTCGCTGCATGATTCATTGTTCTATTCTGTTTCTAGAGACTAGGGTACATGTTATGCAGAAAAGAAAGTGCTTCCAAAAACATGTATATTATTTTTCATAGGGTTATGAACCACCTTGAGTTAGCCTATTTGTCAAAAAGAGCCAAATAATGAAGAGCTTAGAAGGAATGGTTCAATGTTGGCTCACACCGTCTATCTAGGATTTAATATTGTTATCTTCACAACTAAATATTCATGACAATAGTCAAGAGTGACTCCATTAACTTCATTACTCATAAAATGAAGTCATAGACTTTTGTGGGGTTGGAGTCCTCAAGGGGGGTGACACAGTAATTGAAGATTTGGACTTTGAAAGGTATGCCTCCTTCATGGTCCCAGGTTTGAGATTTACTTGTGATATTACTCTTTCGATGGTTCCTGTGCCTTACCTAGGGATGTGCATGGTTATCCTTGTTTTAAAAAAAAGACTTTTGTGGGGTTGGATTAGTAGTAATGCATAGGATAAAAAAAGCTAACCATCATGAATTAGTAGTTGTGAAAGAGGGTGCGGTCACCTACTAGAAAATAATTTCATATAAATTTTCTTGACGTCCAGATATTTTAAGGTCTTACTGTGTGCTCCTTGAGAAAGAATAGTTGAGATATGTGTAAGCTGTCCAGACACTCACTTATATACAAATATATACAAAAATCAAGGATAAAAAAACTATCAATGTGCTTTCTTCAGTGTCATTGCCATGCAAGTGGTTGATGTTTTTCTGTTCCTCGTTCAGACTTGCAGGCGAGTTCTAATCCGAGTTGTTCTTCCTTAAAAGGGCTTAAATCTGTCAATGGCTGCTCTACAATATCTTTGAACAGCGGAGCATAGGCAAAACCTTTGGAATTCTGAATGTGAAAAATGATCAATGAGGTGTGCTGCAGAAGCTGATGTGGATGACAGCGAGGCGAGACCATGAGGCAATAATGTACACCTGGGATTTACAACACTTGCTCTCACACTAATAGATTAGTGACTGGAAGAAATGCATATGTACGCAGACCAAAAGTAAGTCTGCTTACTCGTTCTCCATTCTTGTTGTTCGAGTAAGTGAAACAATGTTAGTTAGGGTTGGCAGAGGTTTTTTGGTCATGTACAGGTCATTTCACTTCGCTTTCTAACATGATATAATTGATATAAGGATTATCATATTTTTTGTTGAGTTGAATCGATTTCAGTTGGGTGGAATACCCTGGTTTGCTGAGTTCCAATTCTCCTCAGGTAAATATTTCTGATGTCTGCAGCGGACGGATGAATCGTCAATCTGAGCAACCCGAACCGTAAGGATTGGATTGGGTTAGGTTATGAGTTTCTAATTTTTGTTGAGGTTTTTTATTTTCTATTTTTCATTGGGTTGAGTCAATTCTTGAGTTGATTCATTTTTAACTCGTACAAGTCAACCCAACCCGAATTTAAAATAATAATATTTGTGTGTGTGTCAATATGCTCTCAACATTATTGATAAGAAACATTACATATTTTTTCTTTTATTTTTTCTGCATATTTAAGGGTTATAAGTTGAGTCTTAGAGAAGAAAAAATATATTAACACAACGGATTAGGTTGGATTACTCTAATACTTAGGGTTGGATGGGTGGTCGGATTATTTGGATTGGTCCAAAAGAATTTCCTTACCCTACTGAACTTGAACCATATACACCCTAGTTTAAATTGTAGTTTCTATGTTTTTTTTTTAACCATGCAAGTATTGAGTTAGTTTCTGTGCCTCGACTATTTTCAATATTTTGATGTTTGAGAAAGTTGTAAAAACTAATTTCCTAAATAGGTAGGTAGTAGCATGGATTGAATTCATAATCTCTTAAATCTTGGAGTTGTTTTTTTTAAAAAAATAATAATTTATAATCACTATGTCAATCCATGAGAGGTGTTTCTCTA

mRNA sequence

CCTAAACGCAGGGGGTCGAAATCGAGGACTCATTTGATTCGCAGCTCTATCGTCTCCTTCAAATTCCAGAGATTTTGCATCATCAAACACCGATTGATCGGAATTCACACTCCCATTTCCGGTTCCAATTTCTACTTATTCCGCGATTTTGCAACTTCCATCAACCCCCATTTCGAGCTCCGATCGATTTGAATGGATTCACATTAGCTATGCGAATTAGATTGTGTATTTCGTTCATTTCATGAAGCAAGAATCGGAGACAAAATCTGCGAGACCCAACAGAAAACCTGGGTGCAAACGACCAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCCGAGCCCAGCGATGGCGTCGGGCTGCAAATGACCCTCTTATTCTTCTCTACTCGTGCCTACAGGTTTCGACCCTCCAATTTCTCCATTGCCCAGATTCACAGCTTTGCCGCTCGACCCTTTTTTGATCGAGATTTGATACGAAACCCGGAAGCATGGCTGGTGAAGGTTGTTTGTACTCTCTTTTTTCGATCGCATTATCTGAATTCTTCTTGCTTTGGTTATCTTAGTAGGAACTTGAACCCTTCCATTGCTTTTGAGGTTATCAAGCGGTTTAGAGATCCGTTGTTGGGGTTTAAGTTTTTTGAGTTTAGTAGAACGCATTTGAGCATTAATCATACTTTTAAGACTTATGATTTACTCATGAGGAGTCTTTGTCAAATGGGTCTTCATGATTCTGCTAAAGTCGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTTGAACTCTTGGTGTTTTCGTATGCTCGAATGGGGAAGTTGGATTCTGTGAAAATGTTTCTCGAGGAGGTTCATTGTTATGGTATTAAAGTGAGTCCTCTTTTATACAATAACTTGTTGAATATGTTGGTCAAGCAGCACCAAGTAGATGAAGCTGTCTTACTTTTCAGAGAGCACTTGGAACCACATTTTGTTCCAGACGTTTACACTTTCAATATTCTAATTAGAGGGTTGTGCGGGATAGGAGAAATTGGTAAGGCGTTTGAGTTTTTGCGGAGTATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACACTTATAAATGGGTTTTGTAGGGTTAATGAGATTATTAAAGGGCATGATTTGCTAAAAGAAGTTCAGTCATTAAAAGGGGTTTCCCCAGATGTTATAACCTACACATCAATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTCGATGAGATGGTTAGTTCGGCAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTTATGCATGAGAAAATGCTTCTTCTTGGCTGTCCACCAGATGTGGTCACGGTCACTTCCCTGATTGATGGCTATTGCCGCGCAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAAGATATGAAAGTAAGGGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGCAAGGAAAATAGAATAGAGGAGGCCAGAAATTTTTTGAGGCAGTTGAAATCGATGGAGGTTGTTCCTAAACCATTCATTTATAATCCTGTAATCGATGGATTTTGCAAGGCTGGGAGGGTGGATGAGGCAAATGGCATTGTAGCTGAGATGCAGGAGAAGAAATGCAGCCCCGACAAGATAACATTTACTATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGATTGAAGCAATTAGGATATTTTACAAGATGTTGGAAACCAAATGTATTCCAGATGAAATAACTATTAGTTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATAAAACAAGCTGCCTTAGAGAACCTGAACTTGGGTTTGTTATCCTTGAGAAGTCCGCTTACAAGAAAATCTTTGTGTGTTCCAGTTGCTGTTTGATGAAGTCTATTATGAAGGTGAACAAAGAATTTTTGGCTTGTAACGACTGAGAAACGTTCTCTTCTTCTGTGCCAGATCACAAAATAAGCAAGCAAAGGCAGAGACAAATAGCTTTATAGATGGTTAGTACATGTACAATACCCACCCACATAAAAAAAAACTGTAGTTTTTGTCATACAAAAAGTGAATGGTACCTATTGTGTGGCTCACTGCACATTGTGCTTGTTGAACCTGGGATGCCTTTTCTTTGGGAAAGCCACTCTCGCTGCATGATTCATTGTTCTATTCTGTTTCTAGAGACTAGGGTACATGTTATGCAGAAAAGAAAGTGCTTCCAAAAACATGTATATTATTTTTCATAGGGTTATGAACCACCTTGAGTTAGCCTATTTGTCAAAAAGAGCCAAATAATGAAGAGCTTAGAAGGAATGGTTCAATGTTGGCTCACACCGTCTATCTAGGATTTAATATTGTTATCTTCACAACTAAATATTCATGACAATAGTCAAGAGTGACTCCATTAACTTCATTACTCATAAAATGAAGTCATAGACTTTTGTGGGGTTGGAGTCCTCAAGGGGGGTGACACAGTAATTGAAGATTTGGACTTTGAAAGGGCTTAAATCTGTCAATGGCTGCTCTACAATATCTTTGAACAGCGGAGCATAGGCAAAACCTTTGGAATTCTGAATGTGAAAAATGATCAATGAGGTGTGCTGCAGAAGCTGATGTGGATGACAGCGAGGCGAGACCATGAGGCAATAATGTACACCTGGGATTTACAACACTTGCTCTCACACTAATAGATTAGTGACTGGAAGAAATGCATATGTACGCAGACCAAAAGTAAGTCTGCTTACTCGTTCTCCATTCTTGTTGTTCGAGTAAGTGAAACAATGTTAGTTAGGGTTGGCAGAGGTTTTTTGGTCATGTACAGGTCATTTCACTTCGCTTTCTAACATGATATAATTGATATAAGGATTATCATATTTTTTGTTGAGTTGAATCGATTTCAGTTGGGTGGAATACCCTGGTTTGCTGAGTTCCAATTCTCCTCAGGTAAATATTTCTGATGTCTGCAGCGGACGGATGAATCGTCAATCTGAGCAACCCGAACCGTAAGGATTGGATTGGGTTAGGTTATGAGTTTCTAATTTTTGTTGAGGTTTTTTATTTTCTATTTTTCATTGGGTTGAGTCAATTCTTGAGTTGATTCATTTTTAACTCGTACAAGTCAACCCAACCCGAATTTAAAATAATAATATTTGTGTGTGTGTCAATATGCTCTCAACATTATTGATAAGAAACATTACATATTTTTTCTTTTATTTTTTCTGCATATTTAAGGGTTATAAGTTGAGTCTTAGAGAAGAAAAAATATATTAACACAACGGATTAGGTTGGATTACTCTAATACTTAGGGTTGGATGGGTGGTCGGATTATTTGGATTGGTCCAAAAGAATTTCCTTACCCTACTGAACTTGAACCATATACACCCTAGTTTAAATTGTAGTTTCTATGTTTTTTTTTTAACCATGCAAGTATTGAGTTAGTTTCTGTGCCTCGACTATTTTCAATATTTTGATGTTTGAGAAAGTTGTAAAAACTAATTTCCTAAATAGGTAGGTAGTAGCATGGATTGAATTCATAATCTCTTAAATCTTGGAGTTGTTTTTTTTAAAAAAATAATAATTTATAATCACTATGTCAATCCATGAGAGGTGTTTCTCTA

Coding sequence (CDS)

ATGAAGCAAGAATCGGAGACAAAATCTGCGAGACCCAACAGAAAACCTGGGTGCAAACGACCAAGGATTGTGATTGAGAATATATGGGAAGATAGAGCCGAGCCCAGCGATGGCGTCGGGCTGCAAATGACCCTCTTATTCTTCTCTACTCGTGCCTACAGGTTTCGACCCTCCAATTTCTCCATTGCCCAGATTCACAGCTTTGCCGCTCGACCCTTTTTTGATCGAGATTTGATACGAAACCCGGAAGCATGGCTGGTGAAGGTTGTTTGTACTCTCTTTTTTCGATCGCATTATCTGAATTCTTCTTGCTTTGGTTATCTTAGTAGGAACTTGAACCCTTCCATTGCTTTTGAGGTTATCAAGCGGTTTAGAGATCCGTTGTTGGGGTTTAAGTTTTTTGAGTTTAGTAGAACGCATTTGAGCATTAATCATACTTTTAAGACTTATGATTTACTCATGAGGAGTCTTTGTCAAATGGGTCTTCATGATTCTGCTAAAGTCGTGTTTGATTGCATGAGGAGTGATGGGATTTTTCCGGATAGTTCCATTGTTGAACTCTTGGTGTTTTCGTATGCTCGAATGGGGAAGTTGGATTCTGTGAAAATGTTTCTCGAGGAGGTTCATTGTTATGGTATTAAAGTGAGTCCTCTTTTATACAATAACTTGTTGAATATGTTGGTCAAGCAGCACCAAGTAGATGAAGCTGTCTTACTTTTCAGAGAGCACTTGGAACCACATTTTGTTCCAGACGTTTACACTTTCAATATTCTAATTAGAGGGTTGTGCGGGATAGGAGAAATTGGTAAGGCGTTTGAGTTTTTGCGGAGTATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACACTTATAAATGGGTTTTGTAGGGTTAATGAGATTATTAAAGGGCATGATTTGCTAAAAGAAGTTCAGTCATTAAAAGGGGTTTCCCCAGATGTTATAACCTACACATCAATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTCGATGAGATGGTTAGTTCGGCAATCAAACCCAATGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGTAAAGCTGGAGACATGAGATCTGCTTTGGTTATGCATGAGAAAATGCTTCTTCTTGGCTGTCCACCAGATGTGGTCACGGTCACTTCCCTGATTGATGGCTATTGCCGCGCAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAAGATATGAAAGTAAGGGACCTGTCTCCAAATGTGTATACCTATGCTGTTCTCATCAATGCTCTCTGCAAGGAAAATAGAATAGAGGAGGCCAGAAATTTTTTGAGGCAGTTGAAATCGATGGAGGTTGTTCCTAAACCATTCATTTATAATCCTGTAATCGATGGATTTTGCAAGGCTGGGAGGGTGGATGAGGCAAATGGCATTGTAGCTGAGATGCAGGAGAAGAAATGCAGCCCCGACAAGATAACATTTACTATTCTCATTATTGGAAACTGTATGAAAGGGAGAATGATTGAAGCAATTAGGATATTTTACAAGATGTTGGAAACCAAATGTATTCCAGATGAAATAACTATTAGTTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATAAAACAAGCTGCCTTAGAGAACCTGAACTTGGGTTTGTTATCCTTGAGAAGTCCGCTTACAAGAAAATCTTTGTGTGTTCCAGTTGCTGTTTGA

Protein sequence

MKQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFSIAQIHSFAARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSIAFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV

Homology

[Close]

BLAST of Sed0020593.1 vs. NCBI nr
Match: KAG7030515.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.6e-297
Identity = 506/589 (85.91%), Postives = 544/589 (92.36%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF 
Sbjct: 7   KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ +S A     ARPF DR++IRNPEAWLVKVVCTLFFRSH LN +CFGYLSRNLNPSI
Sbjct: 67  IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRAD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSSIVE+LV SY+R+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYSRLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVN++ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNDVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAGMP+EASQIKQAA ENLN  LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGMPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. NCBI nr
Match: XP_022946631.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1027.7 bits (2656), Expect = 3.9e-296
Identity = 506/589 (85.91%), Postives = 542/589 (92.02%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF 
Sbjct: 7   KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ +S A     ARPF DR++IRNPEAWLVKVVCTLFFRSH +N +CFGYLSRNLNPSI
Sbjct: 67  IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSIN-ACFGYLSRNLNPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVNE+ KGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLIDGFGKAG+MR AL M+EKMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAG P+EASQIKQAA ENLN  LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. NCBI nr
Match: XP_023546864.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1022.3 bits (2642), Expect = 1.6e-294
Identity = 502/589 (85.23%), Postives = 541/589 (91.85%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF 
Sbjct: 7   KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ +S A     ARPF DR++IRNPEAWLVKVVCTLFFRSH LN +CFGYLSRNLNPSI
Sbjct: 67  IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMRAASELFDEMVSSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+M+VRDLSPNVYTYAVLINALCKENRI+EARNFLR LK  E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMEVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEMQEK+C PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKRCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAGMP+EASQIKQAA ENLN  L SL++PLT KS CVPVA+
Sbjct: 547 NSLISCLLKAGMPDEASQIKQAAFENLNFDLSSLKNPLTTKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. NCBI nr
Match: XP_022999210.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1018.8 bits (2633), Expect = 1.8e-293
Identity = 502/590 (85.08%), Postives = 541/590 (91.69%), Query Frame = 0


Query: 1   MKQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNF 60
           +KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RA RFR SNF
Sbjct: 6   LKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRFRASNF 65

Query: 61  SIAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPS 120
            IAQ +S A     ARPF DR++IRNPE+WLVKVVCTLFFRSH LN +CFGYLSRNLNPS
Sbjct: 66  FIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPS 125

Query: 121 IAFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRS 180
           IAFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+
Sbjct: 126 IAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRT 185

Query: 181 DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDE 240
           DGI PDSSIVE+LV SYA++GKLD+ K FL+E+HCYGIKV P +YNN LNMLVKQ+QVDE
Sbjct: 186 DGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQNQVDE 245

Query: 241 AVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLIN 300
           AVLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLIN
Sbjct: 246 AVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLIN 305

Query: 301 GFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIK 360
           GFCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IK
Sbjct: 306 GFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 365

Query: 361 PNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKL 420
           PNDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKL
Sbjct: 366 PNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKL 425

Query: 421 WEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCK 480
           WE+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LK  E+VPKPFIYNPVIDGFCK
Sbjct: 426 WEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCK 485

Query: 481 AGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEIT 540
           AG+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEIT
Sbjct: 486 AGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEIT 545

Query: 541 ISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           I+SLISCLLKAGMP+EASQIKQAALE LN  LLSL++PLT KS CVPVA+
Sbjct: 546 INSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLTIKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. NCBI nr
Match: XP_038890050.1 (pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida])

HSP 1 Score: 1017.7 bits (2630), Expect = 4.0e-293
Identity = 504/589 (85.57%), Postives = 541/589 (91.85%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           KQ S+T+S RP+R PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+R YRFR SNFS
Sbjct: 7   KQISDTQSERPSRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRTYRFRASNFS 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ +S A     ARPF DR+++RNPE WLVKVVCTLFFRS  LN +CFGYLSRNLNPSI
Sbjct: 67  IAQFYSLADGVSRARPFCDREVLRNPETWLVKVVCTLFFRSISLN-ACFGYLSRNLNPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRFRDPLLG KFFEFSRTHLSI HTF TYDLL+R+LCQMGL+DSAK+VFDCMRSD
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSIKHTFNTYDLLVRNLCQMGLNDSAKIVFDCMRSD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSSIVEL+V SYA+MGKLDS K FL EVH YGIKVSP +YNNLLNMLVKQ+ VDEA
Sbjct: 187 GILPDSSIVELMVSSYAQMGKLDSAKNFLNEVHRYGIKVSPFVYNNLLNMLVKQNLVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+ VPDVY+FNILIRGLC IG+I KAFEF ++MGNFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYLVPDVYSFNILIRGLCRIGKIDKAFEFFQNMGNFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVNEI KGHDLLKEV S+KGVSPDV+TYTS+ISGYCKLGDMKAAS+LFDEMVSS IKP
Sbjct: 307 FCRVNEISKGHDLLKEVLSIKGVSPDVVTYTSLISGYCKLGDMKAASDLFDEMVSSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLIDGFGK G+MRSALVM+EKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKVGNMRSALVMYEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+MKVR+LSPNVYTYAVLINALCKENRI+EAR+FLR LK  EVVPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRNLSPNVYTYAVLINALCKENRIQEARSFLRHLKVSEVVPKPFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI  FYKMLE  CIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMLEVNCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAGMPNEASQIKQAA+ENLNLGLLSL SPLT+KS CVPVAV
Sbjct: 547 NSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLGSPLTKKSSCVPVAV 594

[Close]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot
Match: Q9ZUE9 (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX=3702 GN=At2g06000 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.6e-157
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0


Query: 61  SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
           +IA  H+ +     ARP  +  R++I  PEAWLVK+V TLF      +  CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
           P I+FEV+K+   +P +GF+F+EFSR  L+I H+F TY+LL RSLC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
           M+SDG+ P++ ++  LV S+A  GKL      L  +  + ++   ++ N+LLN LVK  +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
           V++A+ LF EHL      D  TFNILIRGLCG+G+  KA E L  M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
           LI GFC+ NE+ K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
            I P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
            +LWE+M  R + PN +TY++LINALC ENR+ +AR  L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
           FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
           +IT+SSL+SCLLKAGM  EA  + Q A +  +  ++ L +     +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533

[Close]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-70
Identity = 157/480 (32.71%), Postives = 254/480 (52.92%), Query Frame = 0


Query: 107 YLSRNLNPSIAFE-VIKRFRDPLLGFKFFEFSRTH--------------LSINHTFKTYD 166
           +LS N  P  A   ++K   D  L  KF  ++  H              L+    +KT  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 167 LLMRSLCQMGLHDS-AKVVFDCMRS--DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 226
           +L   +    L D  A +VF  ++   D  +  SS+ +L+V SY+R+  +D     +   
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 227 HCYGIKVSPLLYNNLLNMLVK-QHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGE 286
             +G     L YN +L+  ++ +  +  A  +F+E LE    P+V+T+NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 287 IGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYT 346
           I  A      M   GC P++V+YNTLI+G+C++ +I  G  LL+ + +LKG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280

Query: 347 SIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLL 406
            +I+G C+ G MK  S +  EM       ++ T+N LI G+ K G+   ALVMH +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 407 GCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEA 466
           G  P V+T TSLI   C+AG +N+ ++  + M+VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 467 RNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIG 526
              LR++      P    YN +I+G C  G++++A  ++ +M+EK  SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 527 NCMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAGMPNEASQIKQAALENLNLGL 568
            C    + EA+R+  +M+E    PD IT SSLI    +     EA  + +   E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516

[Close]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-61
Identity = 137/399 (34.34%), Postives = 217/399 (54.39%), Query Frame = 0


Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
           TY+ ++   C++G  + A      +   G+ PD      L+  Y +   LDS      E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
              G + + + Y +L++ L    ++DEA+ LF +  +    P V T+ +LI+ LCG    
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
            +A   ++ M   G  P+I +Y  LI+  C   +  K  +LL ++   KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399

Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K+ ++  A+ +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459

Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
             PDVVT  SLIDG CR+G  +   +L   M  R L P+ +TY  +I++LCK  R+EEA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
           +    L+   V P   +Y  +IDG+CKAG+VDEA+ ++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAG 548
           C  G++ EA  +  KM++    P   T + LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-61
Identity = 126/374 (33.69%), Postives = 208/374 (55.61%), Query Frame = 0


Query: 148 KTYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEE 207
           KT+  +M+   + G  D A  + + M   G    +  V ++V  + + G+++    F++E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 208 V-HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIG 267
           + +  G       +N L+N L K   V  A+ +    L+  + PDVYT+N +I GLC +G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344

Query: 268 EIGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITY 327
           E+ +A E L  M    C P+ V+YNTLI+  C+ N++ +  +L + + S KG+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTF 404

Query: 328 TSIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLL 387
            S+I G C   + + A ELF+EM S   +P++FT+N+LID     G +  AL M ++M L
Sbjct: 405 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 464

Query: 388 LGCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEE 447
            GC   V+T  +LIDG+C+A +  +  +++++M+V  +S N  TY  LI+ LCK  R+E+
Sbjct: 465 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 524

Query: 448 ARNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILII 507
           A   + Q+      P  + YN ++  FC+ G + +A  IV  M    C PD +T+  LI 
Sbjct: 525 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 584

Query: 508 GNCMKGRMIEAIRI 521
           G C  GR+  A ++
Sbjct: 585 GLCKAGRVEVASKL 597

[Close]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-59
Identity = 126/392 (32.14%), Postives = 201/392 (51.28%), Query Frame = 0


Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
           +Y++++  +CQ+G    A  +   M   G  PD      +V  Y R G+LD V   +E +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
              G+K                                   P+ Y +  +I  LC I ++
Sbjct: 308 KRKGLK-----------------------------------PNSYIYGSIIGLLCRICKL 367

Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
            +A E    M   G  PD V Y TLI+GFC+  +I        E+ S + ++PDV+TYT+
Sbjct: 368 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTA 427

Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
           IISG+C++GDM  A +LF EM    ++P+  TF  LI+G+ KAG M+ A  +H  M+  G
Sbjct: 428 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 487

Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
           C P+VVT T+LIDG C+ G+++   +L  +M    L PN++TY  ++N LCK   IEEA 
Sbjct: 488 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 547

Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
             + + ++  +      Y  ++D +CK+G +D+A  I+ EM  K   P  +TF +L+ G 
Sbjct: 548 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 603

Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLI 541
           C+ G + +  ++   ML     P+  T +SL+
Sbjct: 608 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

[Close]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL
Match: A0A6J1G470 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450639 PE=4 SV=1)

HSP 1 Score: 1027.7 bits (2656), Expect = 1.9e-296
Identity = 506/589 (85.91%), Postives = 542/589 (92.02%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RAYRFR SNF 
Sbjct: 7   KQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFF 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ +S A     ARPF DR++IRNPEAWLVKVVCTLFFRSH +N +CFGYLSRNLNPSI
Sbjct: 67  IAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSIN-ACFGYLSRNLNPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+D
Sbjct: 127 AFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRTD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSSIVE+LV SYAR+GKLD+ K FL+E+HCYGIKVSP +YNN LNMLVKQ+QVDEA
Sbjct: 187 GILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQNQVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVNE+ KGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKP
Sbjct: 307 FCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLIDGFGKAG+MR AL M+EKMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LKS E+VPKPFIYNPVIDGFCKA
Sbjct: 427 EEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEITI
Sbjct: 487 GKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAG P+EASQIKQAA ENLN  LLSL++PLTRKS CVPVA+
Sbjct: 547 NSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLTRKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL
Match: A0A6J1KES2 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493657 PE=4 SV=1)

HSP 1 Score: 1018.8 bits (2633), Expect = 8.8e-294
Identity = 502/590 (85.08%), Postives = 541/590 (91.69%), Query Frame = 0


Query: 1   MKQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNF 60
           +KQES T+S  PNR PGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFS+RA RFR SNF
Sbjct: 6   LKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRFRASNF 65

Query: 61  SIAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPS 120
            IAQ +S A     ARPF DR++IRNPE+WLVKVVCTLFFRSH LN +CFGYLSRNLNPS
Sbjct: 66  FIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLN-ACFGYLSRNLNPS 125

Query: 121 IAFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRS 180
           IAFEVIKRFRDPLLG KFFEFSRTHLSINHTF TYDLL+R+LCQMGL+DSAK VFDCMR+
Sbjct: 126 IAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFDCMRT 185

Query: 181 DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDE 240
           DGI PDSSIVE+LV SYA++GKLD+ K FL+E+HCYGIKV P +YNN LNMLVKQ+QVDE
Sbjct: 186 DGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQNQVDE 245

Query: 241 AVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLIN 300
           AVLLFREHLEP+F PDVYTFNILIRGLC IGE  KAFE+L++M NFGCFPDIVSYNTLIN
Sbjct: 246 AVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYNTLIN 305

Query: 301 GFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIK 360
           GFCRVNE+ KGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IK
Sbjct: 306 GFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 365

Query: 361 PNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKL 420
           PNDFTFNVLIDGFGKAG+MR AL M++KMLLLGC PDVVTVTSLIDGYCRAGEVNQGLKL
Sbjct: 366 PNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQGLKL 425

Query: 421 WEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCK 480
           WE+MKVRDLSPNVYTYAVLINALCKENRI+EARNFLR LK  E+VPKPFIYNPVIDGFCK
Sbjct: 426 WEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVIDGFCK 485

Query: 481 AGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEIT 540
           AG+VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI IFYKMLETKCIPDEIT
Sbjct: 486 AGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIPDEIT 545

Query: 541 ISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           I+SLISCLLKAGMP+EASQIKQAALE LN  LLSL++PLT KS CVPVA+
Sbjct: 546 INSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLTIKSSCVPVAI 594

[Close]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL
Match: A0A6J1DMW0 (pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=3673 GN=LOC111021880 PE=4 SV=1)

HSP 1 Score: 1011.1 bits (2613), Expect = 1.8e-291
Identity = 496/589 (84.21%), Postives = 536/589 (91.00%), Query Frame = 0


Query: 2   KQESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFS 61
           +QES+T+S RP+R PGCKR RIVIEN+WEDRAE SDGVGLQMTLLFFS+RAYRFR S+FS
Sbjct: 7   EQESDTQSERPDRIPGCKRTRIVIENLWEDRAESSDGVGLQMTLLFFSSRAYRFRASSFS 66

Query: 62  IAQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSI 121
           IAQ HSF      AR F+DR++IRNPEAWL KVVCTLFFRSH LN  CFGYLSRNL PSI
Sbjct: 67  IAQFHSFTDGGSRARSFYDREVIRNPEAWLAKVVCTLFFRSHSLN-GCFGYLSRNLTPSI 126

Query: 122 AFEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSD 181
           AFEVIKRF+DP+LG KFFEFSR HLSINH+F TYDLLMR+LCQMGLH SAK+VFDCMR D
Sbjct: 127 AFEVIKRFKDPILGLKFFEFSRAHLSINHSFNTYDLLMRNLCQMGLHGSAKMVFDCMRCD 186

Query: 182 GIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEA 241
           GI PDSS+VELLV SYA+MGKLDS K+FL EVHCYGIKVSP +YNNLLN+LVKQ+QVDEA
Sbjct: 187 GILPDSSVVELLVSSYAQMGKLDSAKIFLNEVHCYGIKVSPFVYNNLLNLLVKQNQVDEA 246

Query: 242 VLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLING 301
           VLLFREHLEP+F+PD YTFNI+IRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLING
Sbjct: 247 VLLFREHLEPYFIPDAYTFNIIIRGLCRIGEIHKAFEFFQNMGNFGCFPDIVSYNTLING 306

Query: 302 FCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKP 361
           FCRVNEI KGHDLLKEVQS+KGV+PDVITYTSIISGYCKLGDMKAAS L DEMV S IKP
Sbjct: 307 FCRVNEISKGHDLLKEVQSVKGVAPDVITYTSIISGYCKLGDMKAASGLLDEMVGSGIKP 366

Query: 362 NDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLW 421
           NDFTFNVLI GFGK GDM SAL M+EKMLLLGCPPDVVT+TSLIDGYCRAGEVNQGLKLW
Sbjct: 367 NDFTFNVLIHGFGKVGDMISALAMYEKMLLLGCPPDVVTLTSLIDGYCRAGEVNQGLKLW 426

Query: 422 EDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKA 481
           E+MKVR LSPNVYTYAVLINALCKENRI+EAR FLR LK  EVVPK FIYNPVIDGFCKA
Sbjct: 427 EEMKVRGLSPNVYTYAVLINALCKENRIQEARFFLRHLKLSEVVPKTFIYNPVIDGFCKA 486

Query: 482 GRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITI 541
           G+VDEAN IVAEM+EKKCSPDKITFTILIIGNCM+GRM+EAI IFYKMLET CIPDEITI
Sbjct: 487 GKVDEANVIVAEMREKKCSPDKITFTILIIGNCMQGRMVEAISIFYKMLETNCIPDEITI 546

Query: 542 SSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           +SLISCLLKAGMPNEASQIKQAA+ENLNLGLLSLR+PL RK  CVP+AV
Sbjct: 547 NSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLRNPLVRKPSCVPIAV 594

[Close]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL
Match: A0A5A7V6K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001250 PE=4 SV=1)

HSP 1 Score: 988.8 bits (2555), Expect = 9.7e-285
Identity = 495/588 (84.18%), Postives = 531/588 (90.31%), Query Frame = 0


Query: 3   QESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFSI 62
           +ESE +S RP     CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFS+RAYR R SNFSI
Sbjct: 4   RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63

Query: 63  AQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSIA 122
           +Q +S A     ARPF DR++IRN EAWLVKVVCTLF RSH LN +CFGYLSRNLNPSIA
Sbjct: 64  SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLN-ACFGYLSRNLNPSIA 123

Query: 123 FEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSDG 182
           FEVIKRFRDPLLG KFFEFSR HLSINHTF TYDLLMR+LC++GL+DSAK+VFDCMRSDG
Sbjct: 124 FEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 183

Query: 183 IFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEAV 242
           I PDSSI+ELLV SYARMGKLDS K FL EVHCYGIKVSP +YNNLLNMLVKQ+ VDEAV
Sbjct: 184 ISPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 243

Query: 243 LLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLINGF 302
            LFREHLEP+FVPDVY+FNILIRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLINGF
Sbjct: 244 SLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 303

Query: 303 CRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKPN 362
           CRVNEI KGHDLLKEV  +KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKPN
Sbjct: 304 CRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 363

Query: 363 DFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLWE 422
           +FTFNVLIDGFGK G+MRSA+VM+EKMLLLGCPPDVVTVTSLIDGYCR GEVNQGLKLWE
Sbjct: 364 NFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWE 423

Query: 423 DMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKAG 482
           +MK+R+LSPNVYTYAVLINALCKENRI+EARNFLR LKS EVVPKPFIYNPVID FCKAG
Sbjct: 424 EMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 483

Query: 483 RVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITIS 542
           +VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI  FYKM+E  CIPDEITI+
Sbjct: 484 QVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITIN 543

Query: 543 SLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           SLISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LTRKS  VPVAV
Sbjct: 544 SLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKSSSVPVAV 587

[Close]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL
Match: A0A1S3CB42 (pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN=LOC103498823 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 1.7e-284
Identity = 494/588 (84.01%), Postives = 530/588 (90.14%), Query Frame = 0


Query: 3   QESETKSARPNRKPGCKRPRIVIENIWEDRAEPSDGVGLQMTLLFFSTRAYRFRPSNFSI 62
           +ESE +S RP     CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFS+RAYR R SNFSI
Sbjct: 4   RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63

Query: 63  AQIHSFA-----ARPFFDRDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLNPSIA 122
           +Q +S A     ARPF DR++IRN EAWLVKVVCTLF RSH LN +CFGYLSRNLNPSIA
Sbjct: 64  SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLN-ACFGYLSRNLNPSIA 123

Query: 123 FEVIKRFRDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDCMRSDG 182
           FEVIKRFRDPLLG KFFEFSR HLSINHTF TYDLLMR+LC++GL+DSAK+VFDCMRSDG
Sbjct: 124 FEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 183

Query: 183 IFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQVDEAV 242
           I PDSSI+ELLV SYARMGK DS K FL EVHCYGIKVSP +YNNLLNMLVKQ+ VDEAV
Sbjct: 184 ILPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 243

Query: 243 LLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNTLINGF 302
            LFREHLEP+FVPDVY+FNILIRGLC IGEI KAFEF ++MGNFGCFPDIVSYNTLINGF
Sbjct: 244 SLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 303

Query: 303 CRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSAIKPN 362
           CRVNEI KGHDLLKEV  +KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS IKPN
Sbjct: 304 CRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 363

Query: 363 DFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQGLKLWE 422
           +FTFNVLIDGFGK G+MRSA+VM+EKMLLLGCPPDVVTVTSLIDGYCR GEVNQGLKLWE
Sbjct: 364 NFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWE 423

Query: 423 DMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDGFCKAG 482
           +MK+R+LSPNVYTYAVLINALCKENRI+EARNFLR LKS EVVPKPFIYNPVID FCKAG
Sbjct: 424 EMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 483

Query: 483 RVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPDEITIS 542
           +VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRM+EAI  FYKM+E  CIPDEITI+
Sbjct: 484 QVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITIN 543

Query: 543 SLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSLCVPVAV 586
           SLISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LTRKS  VPVAV
Sbjct: 544 SLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKSSSVPVAV 587

[Close]

BLAST of Sed0020593.1 vs. TAIR 10
Match: AT2G06000.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 557.0 bits (1434), Expect = 1.8e-158
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0


Query: 61  SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
           +IA  H+ +     ARP  +  R++I  PEAWLVK+V TLF      +  CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
           P I+FEV+K+   +P +GF+F+EFSR  L+I H+F TY+LL RSLC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
           M+SDG+ P++ ++  LV S+A  GKL      L  +  + ++   ++ N+LLN LVK  +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
           V++A+ LF EHL      D  TFNILIRGLCG+G+  KA E L  M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
           LI GFC+ NE+ K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
            I P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
            +LWE+M  R + PN +TY++LINALC ENR+ +AR  L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
           FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
           +IT+SSL+SCLLKAGM  EA  + Q A +  +  ++ L +     +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533

[Close]

BLAST of Sed0020593.1 vs. TAIR 10
Match: AT2G06000.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 557.0 bits (1434), Expect = 1.8e-158
Identity = 279/527 (52.94%), Postives = 373/527 (70.78%), Query Frame = 0


Query: 61  SIAQIHSFA-----ARPFFD--RDLIRNPEAWLVKVVCTLFFRSHYLNSSCFGYLSRNLN 120
           +IA  H+ +     ARP  +  R++I  PEAWLVK+V TLF      +  CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 121 PSIAFEVIKRF-RDPLLGFKFFEFSRTHLSINHTFKTYDLLMRSLCQMGLHDSAKVVFDC 180
           P I+FEV+K+   +P +GF+F+EFSR  L+I H+F TY+LL RSLC+ GLHD A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 181 MRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEVHCYGIKVSPLLYNNLLNMLVKQHQ 240
           M+SDG+ P++ ++  LV S+A  GKL      L  +  + ++   ++ N+LLN LVK  +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 241 VDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEIGKAFEFLRSMGNFGCFPDIVSYNT 300
           V++A+ LF EHL      D  TFNILIRGLCG+G+  KA E L  M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 301 LINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 360
           LI GFC+ NE+ K  ++ K+V+S    SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 361 AIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQG 420
            I P + TFNVL+DG+ KAG+M +A  +  KM+  GC PDVVT TSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 421 LKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEARNFLRQLKSMEVVPKPFIYNPVIDG 480
            +LWE+M  R + PN +TY++LINALC ENR+ +AR  L QL S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 481 FCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGNCMKGRMIEAIRIFYKMLETKCIPD 540
           FCKAG+V+EAN IV EM++KKC PDKITFTILIIG+CMKGRM EA+ IF+KM+   C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 541 EITISSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRKSL 580
           +IT+SSL+SCLLKAGM  EA  + Q A +  +  ++ L +     +L
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATL 533

[Close]

BLAST of Sed0020593.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-71
Identity = 157/480 (32.71%), Postives = 254/480 (52.92%), Query Frame = 0


Query: 107 YLSRNLNPSIAFE-VIKRFRDPLLGFKFFEFSRTH--------------LSINHTFKTYD 166
           +LS N  P  A   ++K   D  L  KF  ++  H              L+    +KT  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 167 LLMRSLCQMGLHDS-AKVVFDCMRS--DGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 226
           +L   +    L D  A +VF  ++   D  +  SS+ +L+V SY+R+  +D     +   
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 227 HCYGIKVSPLLYNNLLNMLVK-QHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGE 286
             +G     L YN +L+  ++ +  +  A  +F+E LE    P+V+T+NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 287 IGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYT 346
           I  A      M   GC P++V+YNTLI+G+C++ +I  G  LL+ + +LKG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280

Query: 347 SIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLL 406
            +I+G C+ G MK  S +  EM       ++ T+N LI G+ K G+   ALVMH +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 407 GCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEA 466
           G  P V+T TSLI   C+AG +N+ ++  + M+VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 467 RNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIG 526
              LR++      P    YN +I+G C  G++++A  ++ +M+EK  SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 527 NCMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAGMPNEASQIKQAALENLNLGL 568
            C    + EA+R+  +M+E    PD IT SSLI    +     EA  + +   E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516

[Close]

BLAST of Sed0020593.1 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-62
Identity = 137/399 (34.34%), Postives = 217/399 (54.39%), Query Frame = 0


Query: 149 TYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEEV 208
           TY+ ++   C++G  + A      +   G+ PD      L+  Y +   LDS      E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 209 HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIGEI 268
              G + + + Y +L++ L    ++DEA+ LF +  +    P V T+ +LI+ LCG    
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 269 GKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITYTS 328
            +A   ++ M   G  P+I +Y  LI+  C   +  K  +LL ++   KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399

Query: 329 IISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLLLG 388
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K+ ++  A+ +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459

Query: 389 CPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEEAR 448
             PDVVT  SLIDG CR+G  +   +L   M  R L P+ +TY  +I++LCK  R+EEA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 449 NFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILIIGN 508
           +    L+   V P   +Y  +IDG+CKAG+VDEA+ ++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 509 CMKGRMIEAIRIFYKMLETKCIPDEITISSLISCLLKAG 548
           C  G++ EA  +  KM++    P   T + LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of Sed0020593.1 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-62
Identity = 126/374 (33.69%), Postives = 208/374 (55.61%), Query Frame = 0


Query: 148 KTYDLLMRSLCQMGLHDSAKVVFDCMRSDGIFPDSSIVELLVFSYARMGKLDSVKMFLEE 207
           KT+  +M+   + G  D A  + + M   G    +  V ++V  + + G+++    F++E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 208 V-HCYGIKVSPLLYNNLLNMLVKQHQVDEAVLLFREHLEPHFVPDVYTFNILIRGLCGIG 267
           + +  G       +N L+N L K   V  A+ +    L+  + PDVYT+N +I GLC +G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344

Query: 268 EIGKAFEFLRSMGNFGCFPDIVSYNTLINGFCRVNEIIKGHDLLKEVQSLKGVSPDVITY 327
           E+ +A E L  M    C P+ V+YNTLI+  C+ N++ +  +L + + S KG+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTF 404

Query: 328 TSIISGYCKLGDMKAASELFDEMVSSAIKPNDFTFNVLIDGFGKAGDMRSALVMHEKMLL 387
            S+I G C   + + A ELF+EM S   +P++FT+N+LID     G +  AL M ++M L
Sbjct: 405 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 464

Query: 388 LGCPPDVVTVTSLIDGYCRAGEVNQGLKLWEDMKVRDLSPNVYTYAVLINALCKENRIEE 447
            GC   V+T  +LIDG+C+A +  +  +++++M+V  +S N  TY  LI+ LCK  R+E+
Sbjct: 465 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 524

Query: 448 ARNFLRQLKSMEVVPKPFIYNPVIDGFCKAGRVDEANGIVAEMQEKKCSPDKITFTILII 507
           A   + Q+      P  + YN ++  FC+ G + +A  IV  M    C PD +T+  LI 
Sbjct: 525 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 584

Query: 508 GNCMKGRMIEAIRI 521
           G C  GR+  A ++
Sbjct: 585 GLCKAGRVEVASKL 597

The following BLAST results are available for this feature:

BLAST of Sed0020593.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030515.1	4.6e-297	85.91	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022946631.1	3.9e-296	85.91	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita mosc...	[more]
XP_023546864.1	1.6e-294	85.23	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo...	[more]
XP_022999210.1	1.8e-293	85.08	pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxi...	[more]
XP_038890050.1	4.0e-293	85.57	pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida]	[more]

BLAST of Sed0020593.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUE9	2.6e-157	52.94	Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	3.1e-70	32.71	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	1.5e-61	34.34	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	4.5e-61	33.69	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q0WVK7	4.2e-59	32.14	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0020593.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G470	1.9e-296	85.91	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1KES2	8.8e-294	85.08	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1DMW0	1.8e-291	84.21	pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=...	[more]
A0A5A7V6K1	9.7e-285	84.18	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CB42	1.7e-284	84.01	pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Sed0020593.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06000.1	1.8e-158	52.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G06000.2	1.8e-158	52.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	2.2e-71	32.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	1.1e-62	34.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	3.2e-62	33.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 315..383 e-value: 9.0E-22 score: 79.5 coord: 384..457 e-value: 9.6E-23 score: 82.7 coord: 121..211 e-value: 6.7E-8 score: 34.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 212..314 e-value: 1.4E-23 score: 85.2 coord: 458..563 e-value: 2.5E-26 score: 94.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 499..533 e-value: 6.2E-5 score: 20.9 coord: 394..428 e-value: 7.0E-9 score: 33.3 coord: 429..461 e-value: 1.4E-6 score: 26.1 coord: 253..287 e-value: 1.6E-7 score: 29.0 coord: 149..182 e-value: 1.8E-5 score: 22.6 coord: 359..393 e-value: 4.7E-8 score: 30.7 coord: 288..323 e-value: 3.8E-6 score: 24.7 coord: 465..497 e-value: 4.8E-10 score: 37.0 coord: 324..357 e-value: 6.1E-10 score: 36.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 535..554 e-value: 0.91 score: 9.9 coord: 220..242 e-value: 0.2 score: 12.0 coord: 149..178 e-value: 1.4E-4 score: 21.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 464..509 e-value: 2.0E-13 score: 50.3 coord: 391..440 e-value: 2.9E-18 score: 65.8 coord: 250..299 e-value: 7.5E-14 score: 51.7 coord: 321..369 e-value: 4.7E-18 score: 65.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 11.849223
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 13.800334
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 216..250 score: 8.988323
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 12.375365
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..321 score: 9.492543
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 462..496 score: 12.232868
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 427..461 score: 11.947875
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 497..531 score: 10.13926
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 251..285 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 146..180 score: 10.654441
None	No IPR available	PANTHER	PTHR47941:SF1	OSJNBA0027P08.18 PROTEIN	coord: 58..585
None	No IPR available	PANTHER	PTHR47941	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL	coord: 58..585

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0020593	Sed0020593	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0020593.1-five_prime_utr	Sed0020593.1-five_prime_utr-LG03:12092098..12092338	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0020593.1-exon	Sed0020593.1-exon-LG03:12092098..12094712	exon
Sed0020593.1-exon	Sed0020593.1-exon-LG03:12095173..12096289	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0020593.1-cds	Sed0020593.1-cds-LG03:12092339..12094096	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0020593.1-three_prime_utr	Sed0020593.1-three_prime_utr-LG03:12094097..12094712	three_prime_UTR
Sed0020593.1-three_prime_utr	Sed0020593.1-three_prime_utr-LG03:12095173..12096289	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0020593.1	Sed0020593.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding