Sed0011525 (gene) Chayote v1

Overview
NameSed0011525
Typegene
OrganismSechium edule (Chayote v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
LocationLG05: 7695072 .. 7698163 (+)
RNA-Seq ExpressionSed0011525
SyntenySed0011525
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTACCCATATTTCCAAAATACATTGCCGAAATTACCCCACTATTCTATAAACCCCATCAGACTGGAAGCTAGGGTTCTAGCGTTAACCCTCTGCAGCCAAGAACCAAGACGACGAGTTCATCTTCTTCATTGTCTGAACTAATCTAAAACCAACATTCAGAAATCCATCATTTCTTCCGATCAGCAATGGCCTCAATTGGCGCTAGATCTTTGTTCCGTTCAGTTTCCGGTTCTGCCCGCCGTGCTGCCGCTCAGATCGGATCTCAAGCCCGGCCGTCGTCAAGCTCTCCCTTTCGAATGGCGGCTAACAAGCCCCTCGCTAATCGATCTTTCAGGTTCCTTGCTTAATGCTTTTGCGTCCATTACATGGTTTCTGATCAAATTTTCAATTTATGTGGTTGTGTATTTGGCTTATCAAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGTTGATGCCCTTCCATTCTGCGTCGGCGTCGGCTTTGATGACTTCAATGCTCTCGATTTCAGGTCGCACCTGTGGTTGGCTTCCCGAAGGTGCGCTTACTTATAATTTACTTCTCAAGATAAATTCAGTTTGAAATTTAGAGGCTATTCATAATTTCAGAATTTAGATCCCTTTGATAATGACATAATGTACTGGAAATTGATTTTCTATTTGCATTAGTTCTCTGCTGGATTAATTTCTGCTTTACAATTATTCTCATGAATCAAGAAAGAGAGTTATAGTTTCATAGTTTGAGTGGGGTTAATGATAATTTTTATTTTTTTTGAAATTGGTCAATTTGAGCTTGCTCCCCTATACCCGGAGAAACCATGTTCGTCCCTAGGCCATATACTTGAAATTTAGGGTTTTCTGAGAAATTAATCTCCACCGCCACCTCAAGTTTCGGACCTCAAGGGGAGCACACCTCCAAAGCCTAGGCGCTCGACCATTGTGCTGCCGGCCAGCCCCTAGGGGACATAAGGATAAATTATATTTAAGAATAGTGATAATGATATTGATTTGCAATTCCCCCATATCAACATGATGTTTCTGGAGGAAGAAAGATCCATGGTAGTGTCTATGAACCATTAGGAGATGCAACATGAAACTATATCTTTTGGATCGAATTTAGTATTGATATGGGTTCACATGATGCCAAGTAACTTGTAATTGTTCATGAGACTTTCCTGTGTATATAAAGTTAGATGGGTTAACGCAAGTTTTATGACATCTCTTCATCATCACTTTCTCTTATTATAGACTACTTCTGGTTGCTCCACTTCATATAAAACTTGTTAACATAGAGATTCCTGATCCAATTCCATAATTTTCTTAATGTTATGTTTTGAAAGGAGAAGTAAATCTACTTATAGGCTGTCTAACTAGTGGATTTTTTACTCTTGGATTAGGTAGCTAGCACACTTTATAGGATCATTGATGTTCTTGCCTTCTTGTTCCTCTGGTGAGTTGGTTCCCATAAAATTGTTCAGGACTGATAGAATTGAACAGAATTATCTAATATCATGCATGCAAACAACTTCATTTTTTCTCCTAGTACAAGTTTATTACATCAAGTAGCTTAGCTAATGATCAAATTAGAACAAAAACAAGCTCTTAACAGACAATGATGTTCTATTCTATTTTCTTCACCTCCCATGTCCCATAATTGAATCAGAGTTGAAGTCGTTTTGCTGAACTCGGGTGTTATACAACTTCTCTTCGATATTTTTTGTTCTTAGTCTTACTAAAATGAGTCTTTTATTAGAAAACCTTCCGTTCCTTATTCAAATTATTAATTAAAGAAGTACATTCCCCTGTTTCTCATGTAGGCAAAGACAAGACTAGATGAGGATGGAGAAGCAGGAAGGAATGACTTGAGTTGTTTTTTGAGTTTCGCCCTTTTGTCCTAGTTGACGCTATCCCTGCCCCGACCCCATAAAAAAAAAAAAAACTTGTAGGCGATGATATCATCAATAGGTTAGATGAGATGATTGTTTTTGGAGTGAAATAAAACATATGATATTCTGTTCAGTTCACCGTGTTTGTAGATTGTTGTCTTTTGAAGTGTTAAAGGATTATGGATTCAATTTAATTCCACAACTATATTGGGTTACAGATTACTAGATCTTTGCAGAATAGCTTTTATTCTAAATAGCTTGCTGTTTGCTGTTTTGCAAAGTTTACTTTATATATCAAATATTTGTTACTATCAATTACTTCTTAAAGATGGGGATTGCAAATTCAGCAATATATTACTCTAATCATCAAGTACCATGAAAAGGAGTTTGAAGTAAGCTAAACTGTGAAACCGTTGTTTAGTTAAAATGGGTTTTCCTATTTACCAGTTTTGAGCTCTTGAAGTCAAGAAATGTTTAGTTAAAATGGGTTTTCCTATTTACCAGTTTTGAGCTCTTAAAGTCAAGAAATAGTTGTTAATAAGGTCATCAAACATAAGGAGCTTGCACTTTTAGATAACACTCATCTATTGTTCTTTTTTCCAATCCAATTTAAGGATGAGCTATGAAAAATTTGTCTTTAACTTTTATGAATGATACTTTGGAATATATTTGAAAAAGTTGCTTCTAACTGGCATGGTTATTGTAGTTTTCCTGACCCAATACTTGATCCAAGCCCCTTATAAGTTTAGACTTGGAAAATGTGTTTGATGAGCATGTTGATCACACCTCCCAAATTGTTTCTTGATTTGATTGGAAGATCAAACTGACATGAATAGTACACTAATCACCTGTGTTCATCAGCAGACAAGGATGATCTATGATAAATGACAAAAGGATCTGAGGAAGTTCTCTATCCAACACTCCATACAAACAGTGATTTCTATTAACTAGAAGCTTCCAAGATTCAATTGGTGGTTTGTGAAGAAGAGATTCCAAGCAATGGCAATGGTTGATTGTTATTCGAAGACTGGTCTAAATTTGTAGTACTCCATATGTTCATCACAGACTTGATGCTCTTTGTAGATTGATTGTTAACATTTTTATCAGTTCATGTCAATTTATTTCATAAAATATTCATAGAAATGTGTGCGATAGTGATGCATGGTCCTATCTTGACTAAGAAATCAAAGTGAAAAATTTC

mRNA sequence

AAAGTACCCATATTTCCAAAATACATTGCCGAAATTACCCCACTATTCTATAAACCCCATCAGACTGGAAGCTAGGGTTCTAGCGTTAACCCTCTGCAGCCAAGAACCAAGACGACGAGTTCATCTTCTTCATTGTCTGAACTAATCTAAAACCAACATTCAGAAATCCATCATTTCTTCCGATCAGCAATGGCCTCAATTGGCGCTAGATCTTTGTTCCGTTCAGTTTCCGGTTCTGCCCGCCGTGCTGCCGCTCAGATCGGATCTCAAGCCCGGCCGTCGTCAAGCTCTCCCTTTCGAATGGCGGCTAACAAGCCCCTCGCTAATCGATCTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGTTGATGCCCTTCCATTCTGCGTCGGCGTCGGCTTTGATGACTTCAATGCTCTCGATTTCAGGTCGCACCTGTGGTTGGCTTCCCGAAGACAAGGATGATCTATGATAAATGACAAAAGGATCTGAGGAAGTTCTCTATCCAACACTCCATACAAACAGTGATTTCTATTAACTAGAAGCTTCCAAGATTCAATTGGTGGTTTGTGAAGAAGAGATTCCAAGCAATGGCAATGGTTGATTGTTATTCGAAGACTGGTCTAAATTTGTAGTACTCCATATGTTCATCACAGACTTGATGCTCTTTGTAGATTGATTGTTAACATTTTTATCAGTTCATGTCAATTTATTTCATAAAATATTCATAGAAATGTGTGCGATAGTGATGCATGGTCCTATCTTGACTAAGAAATCAAAGTGAAAAATTTC

Coding sequence (CDS)

ATGGCCTCAATTGGCGCTAGATCTTTGTTCCGTTCAGTTTCCGGTTCTGCCCGCCGTGCTGCCGCTCAGATCGGATCTCAAGCCCGGCCGTCGTCAAGCTCTCCCTTTCGAATGGCGGCTAACAAGCCCCTCGCTAATCGATCTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGTTGATGCCCTTCCATTCTGCGTCGGCGTCGGCTTTGATGACTTCAATGCTCTCGATTTCAGGTCGCACCTGTGGTTGGCTTCCCGAAGACAAGGATGATCTATGA

Protein sequence

MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLESLMPFHSASASALMTSMLSISGRTCGWLPEDKDDL
Homology
[Close]
BLAST of Sed0011525 vs. NCBI nr
Match: XP_023534316.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.5 bits (371), Expect = 5.8e-32
Identity = 77/94 (81.91%), Postives = 87/94 (92.55%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS+SGSARRAAA IGSQAR SS SPFRMA NKPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKDD 95
          S+MPFHSAS++ALM SMLSIS R+CGWLPE KD+
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGKDE 94

[Close]
BLAST of Sed0011525 vs. NCBI nr
Match: XP_022947067.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 146.7 bits (369), Expect = 9.9e-32
Identity = 77/93 (82.80%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS+SGSARRAAA IGSQAR SS SPFRMA NKPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS++ALM SMLSIS R+CGWLPE KD
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. NCBI nr
Match: XP_023512420.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-31
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAAQIGSQA+ SSS+PFRMA  KPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRNFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS+SALMTSMLS+S  +CGWLPE KD
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. NCBI nr
Match: XP_022986407.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAAQIGSQA+ SSS+PFRMA  KPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS+SALMTSMLS+S  +CGWLPE KD
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. NCBI nr
Match: XP_022943541.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAAQIGSQA+ SSS+PFRMA  KPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS+SALMTSMLS+S   CGWLPE KD
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 5  GARSLFRSVSGSARRAAAQIGSQARPSSSSP--FRMAANKPLANRSFRCAAEMSFCLESL 64
          GARS+ R  + S+R AAA  G  A  + S+P  FR  A +       R   E+SFC+ESL
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASASALMTSMLSISGRTCGWLPEDKDD 95
          +P+HSA+ASALMTS LSISG+T GWL +  +D
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSDACND 98

[Close]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match: A0A6J1G5E8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451052 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.8e-32
Identity = 77/93 (82.80%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS+SGSARRAAA IGSQAR SS SPFRMA NKPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS++ALM SMLSIS R+CGWLPE KD
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match: A0A6J1I2H5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAA IGSQAR SS SPFRMA NKPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS++A+M SMLSIS R+CGWLPE KD
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match: A0A6J1J7G1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAAQIGSQA+ SSS+PFRMA  KPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS+SALMTSMLS+S  +CGWLPE KD
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match: A0A6J1FS03 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS SGSARRAAAQIGSQA+ SSS+PFRMA  KPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDKD 94
          S+MPFHSAS+SALMTSMLS+S   CGWLPE KD
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEGKD 93

[Close]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match: A0A6J1G5L1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451052 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.3e-31
Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = 0 

Query: 1  MASIGARSLFRSVSGSARRAAAQIGSQARPSSSSPFRMAANKPLANRSFRCAAEMSFCLE 60
          MASIGARS+FRS+SGSARRAAA IGSQAR SS SPFRMA NKPL++R+FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SLMPFHSASASALMTSMLSISGRTCGWLPEDK 93
          S+MPFHSAS++ALM SMLSIS R+CGWLPE +
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGR 92

[Close]
BLAST of Sed0011525 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 5  GARSLFRSVSGSARRAAAQIGSQARPSSSSP--FRMAANKPLANRSFRCAAEMSFCLESL 64
          GARS+ R  + S+R AAA  G  A  + S+P  FR  A +       R   E+SFC+ESL
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASASALMTSMLSISGRTCGWLPEDKDD 95
          +P+HSA+ASALMTS LSISG+T GWL +  +D
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSDACND 98

[Close]
BLAST of Sed0011525 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0 

Query: 5  GARSLFRSVSGSARRAAAQIGSQARPSSSSP--FRMAANKPLANRSFRCAAEMSFCLESL 64
          GARS+ R  + S+R AAA  G  A  + S+P  FR  A +       R   E+SFC+ESL
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASASALMTSMLSISGRTCGWLPE 91
          +P+HSA+ASALMTS LSISG+T GWL +
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of Sed0011525 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0 

Query: 5  GARSLFRSVSGSARRAAAQIGSQARPSSSSP--FRMAANKPLANRSFRCAAEMSFCLESL 64
          GARS+ R  + S+R AAA  G  A  + S+P  FR  A +       R   E+SFC+ESL
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASASALMTSMLSISGRTCGWLPE 91
          +P+HSA+ASALMTS LSISG+T GWL +
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]
BLAST of Sed0011525 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0 

Query: 6  ARSLFRSVSGSARRAAAQIGSQARPSSSS---PFRMAANKPLANRSFRCAAEMSFCLESL 65
          ARS+FRS +  A   A +  +  +P  SS    FRM    PL NR FR   E+S C+E++
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASASALMTSMLSISGRTCGWLPEDKDD 95
          +P+H+A+ASAL+ SMLS+S R  GW+ +D +D
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDDCND 93

[Close]
BLAST of Sed0011525 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 9.3e-12
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 0 

Query: 6  ARSLFRSVSGSARRAAAQIGSQARPSSSS---PFRMAANKPLANRSFRCAAEMSFCLESL 65
          ARS+FRS +  A   A +  +  +P  SS    FRM    PL NR FR   E+S C+E++
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASASALMTSMLSISGRTCGWLPEDKDD 95
          +P+H+A+ASAL+ SMLS+S R  GW+ +  D+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

The following BLAST results are available for this feature:
BLAST of Sed0011525 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023534316.15.8e-3281.91protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022947067.19.9e-3282.80protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_023512420.12.2e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022986407.13.7e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022943541.13.7e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
BLAST of Sed0011525 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ31.5e-1150.00Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of Sed0011525 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G5E84.8e-3282.80protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1I2H51.8e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1J7G11.8e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1FS031.8e-3181.72protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1G5L15.3e-3181.52protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
BLAST of Sed0011525 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20585.11.1e-1250.00nuclear fusion defective 6 [more]
AT2G20585.21.9e-1251.14nuclear fusion defective 6 [more]
AT2G20585.31.9e-1251.14nuclear fusion defective 6 [more]
AT1G28395.42.4e-1244.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.29.3e-1243.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..91
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0011525.1Sed0011525.1mRNA
Sed0011525.2Sed0011525.2mRNA
Sed0011525.3Sed0011525.3mRNA
Sed0011525.4Sed0011525.4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy