Sed0008416 (gene) Chayote v1

Overview
NameSed0008416
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDBD_Tnp_Mut domain-containing protein
LocationLG02: 32982650 .. 32985139 (+)
RNA-Seq ExpressionSed0008416
SyntenySed0008416
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTTATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAATAAGTGTTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTTGAGTTCAGGACTCCTAGATCCAGCAATCAAGCAGTTGAGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGATTTATGGATCCTTAGGAAGTACGTTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCGCATAGGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTTTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCCTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAAAAGTTAGTTTAACTTATTGGTTTCTATCACTGCTTCTGTCTCTTTGAATTCTTTTAGGTTGATTTTTGTATGCAGAGACCTTCTATCACCTATGCAGAAACCTTCTATCACTTATGCATAAACCTTCTATCACCTATGCATAAACCTTCTATCACCTTTGTAGAACCTTCTATCACTTATGGAGAAACTTCCATCACTTATGCAAAAATCTTCTATCATTTATGCAGAAACCTATCACTCACTTCTGAATGAGCACTATTAATCAAACATTGAAGTCTATCACTCACTCACTCTTAAAATTTATTTTTTGTAGAACATACACAACATTTGAAACCAATGATGATGGACATTTCAAATATTGTTTTATGGCCATGGGTGCTTCTAACTTTGAAGGTTGGTTGTTTTGTAGGCCTAATATATCGTGGATGGGACTTTCTTGAAGGGAAAATTTGGAGGTATTTTGCTATGACCTCAACTATGGATGGTAATAATCAAATATTTCCACTTGCTTTTAGTATTGTTGATTCAGAGAATGATGCTTCTTGGCTTTGGTTTTTTGAGAATATGAAGAAATGTTTTGGACATCCAGAAAATTTGGTTTTCATGTCAGATAGGCATTTGAGCATTCCTAAAGGTTTTCTGACTGTTTATCCAAATGTTGAATATTGTATTTGTATGCAACATTTGCTGATGAACATTAAGTTACACTTTAAAGGATTTGTGATAGATAAGATTTTTAAAACATGCGCAAAGGCTTATACAGTTGAAGATTTCGAATATAATATGAGATTGTTGGAGTCCATACACCCCACAATTCGTCAAGTATTTGTTTAATATTGGTTATGCAAAAGGGCGCGTGCATATTCTAGGAAACGAAGATACAGAATGATGACGTCAAATAGTGCTGAAAGCATAAATTCACTTCTCAAAGAACCTAGAAATTATCCTGTGGCAATGCTTCTTGATTCTACTAGAGACACATTGCAATCATGGTTTTTTGACCGAAGGAAAGCTGCAACTTCTATGACTTCAGTTTTGTCTTCTTGGGCGGAAAAGGTTTTACGAAAAAATCATGACGCATCAAGAACTTTCAAAGTAAGGTTTCAATTTACATTTCTTTCAATTAGGCAGAAATATTCTATCAGCTATGCAGAAGCTTACTATCACCTATGCAAAAAGCTTCTATCACCTCCGCAGAAACCTTCTATCATTTAGGCAGAAATATTCTATACGCCTTCTATCACTTAGGCAGAAACCTTCTATTGTATATACGTTGTCTATACATAAATATTTTATCAGCAATGCATACACCTTCTATCACATATGCATAAACTTATTCAAATATATTTGTACTGTGTTTTGTCTTAAATCGTGATTAGTTTAACTTTTTGTAGGTTGATTCTATCAGCAATGCAGAGCATAAAGTAATTGATGAGACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

mRNA sequence

ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Coding sequence (CDS)

ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Protein sequence

MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKNNGTRHPLVVDAKDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNLDTRSCTCRVWDLDEIPCSHAFVAISCTRFESLYFCV
Homology
[Close]
BLAST of Sed0008416 vs. NCBI nr
Match: TYK14543.1 (uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 7.0e-14
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKN 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+M F+        LEDKDV  FL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA------KDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRL 120
             TRHPLV  A       D        S + N   L+ SS++DD+      F ++ DI +
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 116

Query: 121 DYKSFLVNL 124
              S   +L
Sbjct: 121 SSLSSTFDL 116

[Close]
BLAST of Sed0008416 vs. NCBI nr
Match: KAA0059897.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. NCBI nr
Match: KAA0031318.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0035330.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0037559.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0038032.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. NCBI nr
Match: TYK09469.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK15164.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK16240.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK20570.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. NCBI nr
Match: TYJ98376.1 (uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match: A0A5D3CRP1 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00250 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.4e-14
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKN 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+M F+        LEDKDV  FL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA------KDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRL 120
             TRHPLV  A       D        S + N   L+ SS++DD+      F ++ DI +
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 116

Query: 121 DYKSFLVNL 124
              S   +L
Sbjct: 121 SSLSSTFDL 116

[Close]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match: A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match: A0A5D3DAW8 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001090 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match: A0A5D3C8T8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00080 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match: A0A5A7UZ18 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001920 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

The following BLAST results are available for this feature:
BLAST of Sed0008416 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK14543.17.0e-1441.86uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa][more]
KAA0059897.14.5e-1337.74protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa][more]
KAA0031318.14.5e-1337.74protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 pr... [more]
TYK09469.14.5e-1337.74protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 prot... [more]
TYJ98376.14.5e-1337.74uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa][more]
BLAST of Sed0008416 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CRP13.4e-1441.86SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7T3G52.2e-1337.74Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3DAW82.2e-1337.74Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3C8T82.2e-1337.74SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7UZ182.2e-1337.74Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of Sed0008416 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 126..153
e-value: 7.1E-7
score: 38.9
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 119..143
e-value: 3.3E-6
score: 26.6
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 119..151
score: 9.767181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008416.1Sed0008416.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding