Sed0008416.1 (mRNA) Chayote v1

Overview


Name	Sed0008416.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	DBD_Tnp_Mut domain-containing protein
Location	LG02: 32982650 .. 32985139 (+)
Sequence length	480
RNA-Seq Expression	Sed0008416.1
Synteny	Sed0008416.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTTATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAATAAGTGTTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTTGAGTTCAGGACTCCTAGATCCAGCAATCAAGCAGTTGAGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGATTTATGGATCCTTAGGAAGTACGTTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCGCATAGGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTTTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCCTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAAAAGTTAGTTTAACTTATTGGTTTCTATCACTGCTTCTGTCTCTTTGAATTCTTTTAGGTTGATTTTTGTATGCAGAGACCTTCTATCACCTATGCAGAAACCTTCTATCACTTATGCATAAACCTTCTATCACCTATGCATAAACCTTCTATCACCTTTGTAGAACCTTCTATCACTTATGGAGAAACTTCCATCACTTATGCAAAAATCTTCTATCATTTATGCAGAAACCTATCACTCACTTCTGAATGAGCACTATTAATCAAACATTGAAGTCTATCACTCACTCACTCTTAAAATTTATTTTTTGTAGAACATACACAACATTTGAAACCAATGATGATGGACATTTCAAATATTGTTTTATGGCCATGGGTGCTTCTAACTTTGAAGGTTGGTTGTTTTGTAGGCCTAATATATCGTGGATGGGACTTTCTTGAAGGGAAAATTTGGAGGTATTTTGCTATGACCTCAACTATGGATGGTAATAATCAAATATTTCCACTTGCTTTTAGTATTGTTGATTCAGAGAATGATGCTTCTTGGCTTTGGTTTTTTGAGAATATGAAGAAATGTTTTGGACATCCAGAAAATTTGGTTTTCATGTCAGATAGGCATTTGAGCATTCCTAAAGGTTTTCTGACTGTTTATCCAAATGTTGAATATTGTATTTGTATGCAACATTTGCTGATGAACATTAAGTTACACTTTAAAGGATTTGTGATAGATAAGATTTTTAAAACATGCGCAAAGGCTTATACAGTTGAAGATTTCGAATATAATATGAGATTGTTGGAGTCCATACACCCCACAATTCGTCAAGTATTTGTTTAATATTGGTTATGCAAAAGGGCGCGTGCATATTCTAGGAAACGAAGATACAGAATGATGACGTCAAATAGTGCTGAAAGCATAAATTCACTTCTCAAAGAACCTAGAAATTATCCTGTGGCAATGCTTCTTGATTCTACTAGAGACACATTGCAATCATGGTTTTTTGACCGAAGGAAAGCTGCAACTTCTATGACTTCAGTTTTGTCTTCTTGGGCGGAAAAGGTTTTACGAAAAAATCATGACGCATCAAGAACTTTCAAAGTAAGGTTTCAATTTACATTTCTTTCAATTAGGCAGAAATATTCTATCAGCTATGCAGAAGCTTACTATCACCTATGCAAAAAGCTTCTATCACCTCCGCAGAAACCTTCTATCATTTAGGCAGAAATATTCTATACGCCTTCTATCACTTAGGCAGAAACCTTCTATTGTATATACGTTGTCTATACATAAATATTTTATCAGCAATGCATACACCTTCTATCACATATGCATAAACTTATTCAAATATATTTGTACTGTGTTTTGTCTTAAATCGTGATTAGTTTAACTTTTTGTAGGTTGATTCTATCAGCAATGCAGAGCATAAAGTAATTGATGAGACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

mRNA sequence

ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Coding sequence (CDS)

ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGACGTGGACCGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGTTTGTCGCTATATCGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA

Protein sequence

MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKNNGTRHPLVVDAKDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNLDTRSCTCRVWDLDEIPCSHAFVAISCTRFESLYFCV

Homology

[Close]

BLAST of Sed0008416.1 vs. NCBI nr
Match: TYK14543.1 (uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 7.0e-14
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKN 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+M F+        LEDKDV  FL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA------KDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRL 120
             TRHPLV  A       D        S + N   L+ SS++DD+      F ++ DI +
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 116

Query: 121 DYKSFLVNL 124
              S   +L
Sbjct: 121 SSLSSTFDL 116

[Close]

BLAST of Sed0008416.1 vs. NCBI nr
Match: KAA0059897.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. NCBI nr
Match: KAA0031318.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0035330.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0037559.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0038032.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. NCBI nr
Match: TYK09469.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK15164.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK16240.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK20570.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. NCBI nr
Match: TYJ98376.1 (uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL
Match: A0A5D3CRP1 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00250 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.4e-14
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKDVDRFLTLVKN 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+M F+        LEDKDV  FL+LVK 
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMCFKN-------LEDKDVTWFLSLVKG 60

Query: 61  NGTRHPLVVDA------KDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRL 120
             TRHPLV  A       D        S + N   L+ SS++DD+      F ++ DI +
Sbjct: 61  QITRHPLVAHAIAHVSNMDLEWSSVVDSEMDNLCSLLPSSSIDDD------FQILTDIHV 116

Query: 121 DYKSFLVNL 124
              S   +L
Sbjct: 121 SSLSSTFDL 116

[Close]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL
Match: A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL
Match: A0A5D3DAW8 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001090 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL
Match: A0A5D3C8T8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00080 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

[Close]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL
Match: A0A5A7UZ18 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001920 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 1   MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI-------------------- 60
           M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F+                    
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  ----------PPFEILEDKDVDRFLTLVKNNGTRHPLVVDA----KDFYLEGTS--SSVV 120
                        +I EDKDV  FL+LVK   TRHPLV  A     D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDYKSFLVNL 124
            N   L+ SS++DD+      F ++ DI +   S   +L
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDL 153

The following BLAST results are available for this feature:

BLAST of Sed0008416.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14543.1	7.0e-14	41.86	uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa]	[more]
KAA0059897.1	4.5e-13	37.74	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]	[more]
KAA0031318.1	4.5e-13	37.74	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 pr...	[more]
TYK09469.1	4.5e-13	37.74	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 prot...	[more]
TYJ98376.1	4.5e-13	37.74	uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0008416.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0008416.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRP1	3.4e-14	41.86	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7T3G5	2.2e-13	37.74	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DAW8	2.2e-13	37.74	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C8T8	2.2e-13	37.74	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UZ18	2.2e-13	37.74	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Sed0008416.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 126..153 e-value: 7.1E-7 score: 38.9
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 119..143 e-value: 3.3E-6 score: 26.6
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 119..151 score: 9.767181

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0008416	Sed0008416	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008416.1-exon	Sed0008416.1-exon-LG02:32982650..32982767	exon
Sed0008416.1-exon	Sed0008416.1-exon-LG02:32982850..32983077	exon
Sed0008416.1-exon	Sed0008416.1-exon-LG02:32985006..32985139	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008416.1-cds	Sed0008416.1-cds-LG02:32982650..32982767	CDS
Sed0008416.1-cds	Sed0008416.1-cds-LG02:32982850..32983077	CDS
Sed0008416.1-cds	Sed0008416.1-cds-LG02:32985006..32985139	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0008416.1	Sed0008416.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding