Sed0007887 (gene) Chayote v1

Overview


Name	Sed0007887
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	LG05: 34495313 .. 34500955 (+)
RNA-Seq Expression	Sed0007887
Synteny	Sed0007887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGTTTAGGCATTAATCATCAATTTGGGAGTAAATCTGGAAGTAGAACTACTGGAAAAGGGTTTAGGGTTTTAAGCAAAAGAGGAAGAGAGAGAAAAGGGAGGAAACGAATTCCCCTGCCCTTTCATCGCCGCTCTCCATCGCCGCGGGTTCGCCTTTTCGCCGCCATTGCTTGATTCCGACGCCGACGAAGGTTTTTGGGGCAGAATCACCAATTAGATCAATCCATATATTTTTTTATATTTAATCCTGAAATCTTCTCAAAGTTCCTCGCAAATAGTGTTCGTTTGGGGTTGTTTCGCGATTTTCAGCAAAGACACTTAATTTTGGACTTCCAAATCACTCCGACTCGTGTTTGCCACCCAGGTTTGGCTTGAATTCAAGTATCCATCGGCTGTTGAGTTCATACTGGCGATTTTGCAACAAATCAAACACTTTCCAGCCAAGAGTGGAGTCCGTTTGACGAACTTTGGTGGTAAAACTTCGATTAGACCTCTGCGAATACTTTTCAAGTACCTTAGCATAGTTCTTTTATACTTCTGGAATCCCTATGCTTTAGGATCTGAATTGGTTTTGGAGTGTTCTGACTGATTTTAAGATGATTTTGGTTAATAACAACCTTTCTAAACACTCTTTAAATTTTGGTTAAGTTCTTCATGCCCAATTCTAATTTTAGACCATGTTTAGTTCTTGAAGGTAGTGATGTGATTTTGACTACAAGCTTGGTGATGATGGTTGTGGGGAGGCTCGATTGACCCTTTAGTTGCCCCTTTTGTTATTTTTTTTTTGAAACAAGGGTAACCACGCCCGTTCCTAGGCCAGGCACTAAAGACATCGAAAGAGTAATGTCACGGGTGAACATTGAACCTGGGAGTCTGGGACCTTGAGGGGAGCATACCTTCAAAGCCCAAGTCTTCAACCATTGTGCCACTCCATGGGGACGGCCCTTTTTTTTATTTTACTCACAAACTTTTGGTAGTTAGCTTACTTTCCTTGCTTGGATTTTTATTTTATTTTATTTATTTTTTTTAGGAAACAAACCCTTTCATTGATATATGAAAAAGTTACAAAGAAGAAAGATAAGAGAAGAATGAATACGATGTAGAAAAGAAATAGAGGAAGGAGATGCCAACTACATTGACAAAAATTAAAGTAGGGTCAATAACAAAGAAGATTAAACCAAAATACAAACAAATGCACCAAAAAATAAGAGTTGAATTTTGCTTTAGTCATGTTTGTCGATGTCGGGAAGTAGTTAGCTTACTTTCCTTGCTTGGGTTGATCCTTGGTCAAGAGAGATAGTTGCTATTTGTTTTTTTTTTCTAGACGTTTAGAGTTGTACTTTTGCCTTTTGGTTTAGTTGTTTAATTGCTTTTGTGAGTTGAGACCTTGATGCTCAAGAATTTAAGTTCGGTTTTGTTCTAGAGTAATGAGTACAACTTATCGTTTTACTTGAGTTAAGTTAAATGAGAAGTTTTAGTAATTTGCCAATTTAGTTTGAAATTTGCAGGTTTTAGCAAAGCAACCTTAAATTCCTATCTATGGAGGCTATGGTGAAAAAGTATCAGCAAAAATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAGTTTCAAGTTCTCTTGATTTCACATTTCACAAATGCTTCCTCTATCATCGGGAGATTGCAGGTCAGTCACAGTTGTCATTTTATTAGGCTAATAGATAGTTGTTTTTAGTTTCAATTTTAAAAAAAAAAACTCGAAAATCAGAGCTTCACTCAACTATTCCCGGCTATGAAGCACGGACACGGGACACGGATTCAGACAAGACGATACCCCATATTCTTAACAACTAAGAGTTGTTTTTTTTTTAATAAATTTTTTATATTAAATCTTTAAATTTAGCACAAAATACTAAATGTACTTTACTAAAAAGCATAGAATGTCAAATTAATTACAATGGATTTTGGTTGAGCATGCCATGTGGGAGGTGGCGGCAAACGAGTATTTTAGAAGATGTCGATGGGGTTTTTTTTTAGGGAGAAGAGGTAATGGTGGTTGGTTTTTTGTGACAAATGAGAAAGATGACTTTTTTGTTTTGCCTTTTCCTTTTTCATTATTTAGTTAACTATAATTAAATTATTTTGGGTTTGAGCTTTTAACATTTTAACTCAAAGTCCACACATGTTTACAAGATGTGTCCAATTATTACAGTATAATTAAAAATATGGACACGTAAAATGGCGTGTTGGACACGTGTCTGAGAAGTGTCTAGAAGAATGTGTGTCCGATACGTGTCCAACACAGATTCTTTCCCTATTTTGAAGTATCCGTACTTCATAGATTCCTGGGAGCACCTATGCCCGTCCCAAGACCCGGACCTGGGAGATAACAAGAGATTTTATAATTAAGCTCTCTTATGGAGCTCGAACCTGAGACCTCTTGAAAGCCCCAAGCCTCAATCAACGAGGCTGCCCTTTGTAGACGTTTTCAGTTTCAAAATTAGAATATTTTAAAAATTATTGTCAGGTGATTCAAGACCCTAAGAATTATGGCAGTCTATCTGGCATGGATGGGATTGAAGATGCGGTATTGGCTAAGCAGCTGGGATCCTTGCAACTTAGTTACACATCTATTAGAAATACAATGTAAGTTTGTTTTTGTTCAATTTCTTTTTATGCTTCTGCTTGTGATTCATAATCTCACCCGATAATCTAGACTTAGAAGAAAAAATCAGAAGCAAAAATAAAAATTGATGATGAAATTGCCATGAGCCTAACCTTAACTTAACTGATTAAGGCAAATATCTTTGACCAAGAGGTTGGAGGTTTGAATCTCCATCTCCTCATTCTCCTCATTCTCCTCATGTTGTTGAACAAAAAAAAAAAAATACTGCTCATGAAATTCGTCCAACTGGCCCATTAACTTTTTTCTGCTATATTGTTTACATCAATGAAGAATCTGAATAAATATCTTAGGGAAGAACTTGGGAATATTTTTCGTTCAATGGAGAAGATTTATCGTGATGGGAAGCAATTAATCAAAAGTGGTTCCGATCAGCCATCGAAAAAACAACTACAACAAAGAGTTGGTATAAAACCCAGTATTGAAGTTTGCGTGCATGGGTTAAAGCTTCTATGTGACATGCATCGCTCTGAGTAAGAATTTCTTTTATCTCTTTATGTAAAGTATATGCAATATCTTTTTGAATGCTTAATTTATATTCTGATTGAAGCTTATGTTATGGTACCTATAATTATGGTGCACCGTGTACGACCACAGACTCACTTGTAAATCTATGTTTTATTGTTTTTAACCATTATAGTAGCTTTATCTCATATGCCAAGTTTTTTACTGGATGGTTAATTTGCCTTCTTAATGAACTTGTTTCAATTTCTGTAGGTATCATCTTAAAGAATCTATTGTCTCGGCACTTCGGGAACTTTTCTGGAAACCCGGGTAATTTCTTTTTGTCAGTTGAGGAATTTAAGGTCTTAATGAACTTCTGGTTGTAACTAGAGGATTGATGAAGTTGGTGAAGTAAAAAAAAAACATTTAGCCCCGTTGGATAACCATTTGGTTTTTGAAATTTAAGCTTATTTTCACTTCAATTGTCTACAATGGTTTCATCTTCCCGTTAGGGGGTGTTTGGGGGAAGGGAAACAAGAATGATTATGGGGGAATGAGAATTAGGGGGAGAATAGGAAAGAAAATAATTATGGGGAGAATGATTATTTGGGTTTGAGGGGAGATGAATTATTATGAGGAAAATGATTATTTGTGTTTGGAGTGAAGAGAATGAATGCGAGTGAAAAATAATGAGGAGAATGTAATTATGGGGAGAATGTAATCAAGGTCCCTGGTTCGAGACTCAACTGTGACATTACTCCTTTGATGTCTCCCGGTGCTTGACCTAGGGACGGGTGTGGTTACCCTTGTTTCACAAAAAAAAAAAATAACATGGATAAAATGTAGATATCAATGTAATAAAACTAGAAGTCGGAGTAGTTGTTGTAGCTTAATTTTCAAAATCCAAAAACAAAATGGTTTTCAAACAATGCTTTAATTTTGGAGTTTTAATTTGCTTTTGATAGTTGCTATGAAATATCCTTTTCTTCTAATGTGCCCATATGGGTTTTTAGATTATTTCCTTTTATCATCTTGTTTGTCTTTTTCGTTCCAAAATATGTAACTACTGTGGTTTATTTTCCTCCCTCTTACAGTATGCATCTTGAATTTTTAGGAATCATAGAGCCCAAGATCTCAGTTCCTTACAGCAACTTTTGATTGATCAGCCCAACATTCCGAAAGAGGAAGGTTAGTCGATTTCAGCACATCGTATAATGAACTTTTGTGATAAATATGTTATTTGCAAGTTTAGAAGCACTAAATTTGTGAATCAAAAGAACCATGTTTATATTTTTTGGTAGGAAACCAAGTCAAGATATAAATGAAACATATGTACAAGGGCAAGCAAAAAACAAGCCCACAAATAAAGTATCCGAACCCTAACTTCAAAACAAACCCTAACTCAAGAGGATGAAATCAAGCGCATAATTTCTTAAACGCCAGGTAATAGGGCCATAAGGATGCATTAAACCTAGCTTTAACTAAAACCTCCTCCCACAATCTCTCAACCTCTCTAAAATATTCTGACGTTCTTCTTGAGCCAAATTTCCCTCAATAAGACAGGCATTGCCTGCCACTGTGTTTTTGAAACAAGAAACTAACATTTTCATTGAATCAAAGCCTGCCACTATTTGAAAGAAAGGTAATTGTCTGGCTCATGTTCATGGTTGACTGTCCATTTCATTCTTTTGGGTGCAAAGTTTGCTTTTACTTTCACCATGTAACGCGTTTCATTGTTATGGACCATTTTTGACTTTATCCTATTTGTAATGAAGCACTATCTTGAACTTGAATTAGTTGCCTTGTCCTTGCTTTCAAGTGTTCGAATCTTGCCCTGCTGTTTTCTTTTTTTGAAGCAAAGGTAACCACGCCCGTCCTTAAGCCAGACACTGGAGACATTGAAGGAGTAATGTCAGCCATGCTGTTTCTATAGTGGCTTTTATTTAAGCTTGCCAGTCTGGATGGCTTTAATGTCTTATTTCATCATTCTGCACTTGCCCCTCGATACATGACGAGTATGTTAAGCATAAGATAGAATAATTGAGATGCACACAAGCAAACATGAACACTCATGTTAAGACTAATGTCTAGAAAATCCGCTTAGTTTGGCCATCAAGTGGCCATGTGTTGTCGGAGGCGTAAAACTAAAATTTTGTTGGCTTTGCATTCATTTGATGCTTGGATTAAGTTCCGAAATACTGTTTGTTGCCTGTATTGATATGTTGTGGCATCTTGACATTGCAAAATGGGTTGATTTATATCCTATTTTGTTGCAGTTGAACTCATCTATGATATTATACTGGTTCCAGAAGCCTAAATTGATATGGAGATATTCAAAACAGTTCAAGAACTTTTGATTGCATCTACAAGCTTTCTTCCAAGCAGAGACTTGTATTTTTGCAATGTTGAGTATTGGAAGAGATATTTACGAAGGTAAAGCTTAATGGATATTTATCTGTATATCCCCCTGTTTCCACAGTTCTAGGAAGTAGTCTGGCAACTAATTTTTATTTTTGTTTTAGAGGAAAGA

mRNA sequence

TGAGTTTAGGCATTAATCATCAATTTGGGAGTAAATCTGGAAGTAGAACTACTGGAAAAGGGTTTAGGGTTTTAAGCAAAAGAGGAAGAGAGAGAAAAGGGAGGAAACGAATTCCCCTGCCCTTTCATCGCCGCTCTCCATCGCCGCGGGTTCGCCTTTTCGCCGCCATTGCTTGATTCCGACGCCGACGAAGGTTTTTGGGGCAGAATCACCAATTAGATCAATCCATATATTTTTTTATATTTAATCCTGAAATCTTCTCAAAGTTCCTCGCAAATAGTGTTCGTTTGGGGTTGTTTCGCGATTTTCAGCAAAGACACTTAATTTTGGACTTCCAAATCACTCCGACTCGTGTTTGCCACCCAGGTTTGGCTTGAATTCAAGTATCCATCGGCTGTTGAGTTCATACTGGCGATTTTGCAACAAATCAAACACTTTCCAGCCAAGAGTGGAGTCCGTTTGACGAACTTTGGTGGTTTTAGCAAAGCAACCTTAAATTCCTATCTATGGAGGCTATGGTGAAAAAGTATCAGCAAAAATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAGTTTCAAGTTCTCTTGATTTCACATTTCACAAATGCTTCCTCTATCATCGGGAGATTGCAGGTGATTCAAGACCCTAAGAATTATGGCAGTCTATCTGGCATGGATGGGATTGAAGATGCGGTATTGGCTAAGCAGCTGGGATCCTTGCAACTTAGTTACACATCTATTAGAAATACAATGGAAGAACTTGGGAATATTTTTCGTTCAATGGAGAAGATTTATCGTGATGGGAAGCAATTAATCAAAAGTGGTTCCGATCAGCCATCGAAAAAACAACTACAACAAAGAGTTGGTATAAAACCCAGTATTGAAGTTTGCGTGCATGGGTTAAAGCTTCTATGTGACATGCATCGCTCTGAGTATCATCTTAAAGAATCTATTGTCTCGGCACTTCGGGAACTTTTCTGGAAACCCGGGAATCATAGAGCCCAAGATCTCAGTTCCTTACAGCAACTTTTGATTGATCAGCCCAACATTCCGAAAGAGGAAGTTGAACTCATCTATGATATTATACTGGTTCCAGAAGCCTAAATTGATATGGAGATATTCAAAACAGTTCAAGAACTTTTGATTGCATCTACAAGCTTTCTTCCAAGCAGAGACTTGTATTTTTGCAATGTTGAGTATTGGAAGAGATATTTACGAAGGTAAAGCTTAATGGATATTTATCTGTATATCCCCCTGTTTCCACAGTTCTAGGAAGTAGTCTGGCAACTAATTTTTATTTTTGTTTTAGAGGAAAGA

Coding sequence (CDS)

ATGGAGGCTATGGTGAAAAAGTATCAGCAAAAATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAGTTTCAAGTTCTCTTGATTTCACATTTCACAAATGCTTCCTCTATCATCGGGAGATTGCAGGTGATTCAAGACCCTAAGAATTATGGCAGTCTATCTGGCATGGATGGGATTGAAGATGCGGTATTGGCTAAGCAGCTGGGATCCTTGCAACTTAGTTACACATCTATTAGAAATACAATGGAAGAACTTGGGAATATTTTTCGTTCAATGGAGAAGATTTATCGTGATGGGAAGCAATTAATCAAAAGTGGTTCCGATCAGCCATCGAAAAAACAACTACAACAAAGAGTTGGTATAAAACCCAGTATTGAAGTTTGCGTGCATGGGTTAAAGCTTCTATGTGACATGCATCGCTCTGAGTATCATCTTAAAGAATCTATTGTCTCGGCACTTCGGGAACTTTTCTGGAAACCCGGGAATCATAGAGCCCAAGATCTCAGTTCCTTACAGCAACTTTTGATTGATCAGCCCAACATTCCGAAAGAGGAAGTTGAACTCATCTATGATATTATACTGGTTCCAGAAGCCTAA

Protein sequence

MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDGIEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQRVGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQPNIPKEEVELIYDIILVPEA

Homology

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BLAST of Sed0007887 vs. NCBI nr
Match: XP_022928127.1 (uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VSAL ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE I+D ILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

[Close]

BLAST of Sed0007887 vs. NCBI nr
Match: XP_022989465.1 (uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima])

HSP 1 Score: 324.3 bits (830), Expect = 7.3e-85
Identity = 163/200 (81.50%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMD WDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDHWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEY+LKES+VSAL +LFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYYLKESMVSALPQLFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE ++DIILVPEA
Sbjct: 181 PNIRKEEVEFMFDIILVPEA 200

[Close]

BLAST of Sed0007887 vs. NCBI nr
Match: XP_023529794.1 (uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529795.1 uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529796.1 uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-82
Identity = 162/200 (81.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDPKNYGSLS   G
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPKNYGSLS---G 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TM ELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMVELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VS+L ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSSLPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE I+D ILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 197

[Close]

BLAST of Sed0007887 vs. NCBI nr
Match: XP_022136277.1 (uncharacterized protein At5g43822 isoform X1 [Momordica charantia])

HSP 1 Score: 312.8 bits (800), Expect = 2.2e-81
Identity = 157/200 (78.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS F NAS IIGRLQ++QD KNYGSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL+++SI  TMEELGN+ RSMEKIYRDGKQL+K GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPSIE C++GL LLCDMHR+EYHLKES+VSAL +LFWK  NH AQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE ++D ILV EA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 200

[Close]

BLAST of Sed0007887 vs. NCBI nr
Match: XP_022928123.1 (uncharacterized protein At5g43822 isoform X1 [Cucurbita moschata] >XP_022928124.1 uncharacterized protein At5g43822 isoform X1 [Cucurbita moschata] >XP_022928125.1 uncharacterized protein At5g43822 isoform X1 [Cucurbita moschata])

HSP 1 Score: 311.6 bits (797), Expect = 4.9e-81
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VSAL ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEE 188
           PNI KEE
Sbjct: 181 PNIRKEE 187

[Close]

BLAST of Sed0007887 vs. ExPASy Swiss-Prot
Match: Q6NPG7 (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46
Identity = 98/199 (49.25%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEA+++K+QQKFRK K+EM++W+  QV  +S F NASSII RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           IEDAV+ +Q+G L+    S++N MEE      + EK++RDG QL +  S   SK+++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIES---SKRRVEER 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           +G+KP I  C+ GL +L DMH+SEYHLK SI+S L  L  KP      DL++LQ L++DQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKPS---PGDLNALQYLVVDQ 180

Query: 181 PNIPKEEVELIYDIILVPE 200
           PNIPK+EV+ I+D+I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]

BLAST of Sed0007887 vs. ExPASy TrEMBL
Match: A0A6J1EJ12 (uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VSAL ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE I+D ILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

[Close]

BLAST of Sed0007887 vs. ExPASy TrEMBL
Match: A0A6J1JMF9 (uncharacterized protein At5g43822 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486514 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85
Identity = 163/200 (81.50%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMD WDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDHWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEY+LKES+VSAL +LFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYYLKESMVSALPQLFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE ++DIILVPEA
Sbjct: 181 PNIRKEEVEFMFDIILVPEA 200

[Close]

BLAST of Sed0007887 vs. ExPASy TrEMBL
Match: A0A6J1C552 (uncharacterized protein At5g43822 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008010 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 157/200 (78.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS F NAS IIGRLQ++QD KNYGSLSG+DG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVCLISLFRNASFIIGRLQMLQDSKNYGSLSGIDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL+++SI  TMEELGN+ RSMEKIYRDGKQL+K GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLNFSSIEKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPSIE C++GL LLCDMHR+EYHLKES+VSAL +LFWK  NH AQDLSSLQQLLIDQ
Sbjct: 121 VGLKPSIEDCLNGLMLLCDMHRTEYHLKESVVSALPKLFWKASNHSAQDLSSLQQLLIDQ 180

Query: 181 PNIPKEEVELIYDIILVPEA 201
           PNI KEEVE ++D ILV EA
Sbjct: 181 PNIQKEEVEFVFDTILVVEA 200

[Close]

BLAST of Sed0007887 vs. ExPASy TrEMBL
Match: A0A6J1EQT0 (uncharacterized protein At5g43822 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.4e-81
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VSAL ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEE 188
           PNI KEE
Sbjct: 181 PNIRKEE 187

[Close]

BLAST of Sed0007887 vs. ExPASy TrEMBL
Match: A0A6J1EJF6 (uncharacterized protein At5g43822 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.4e-81
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEAMVKKYQQ+FRKFKDEMDRWDE QV LIS FTNASSIIGRLQV+QDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           I DA+LAKQ+ SLQL ++SI  TMEELGNI RSMEKIYRDGKQLIK GS+QPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           VG+KPS+E C++GL+LLCDMHRSEYHLKES+VSAL ELFWKP NH AQDLSSLQQLL+DQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIPKEE 188
           PNI KEE
Sbjct: 181 PNIRKEE 187

[Close]

BLAST of Sed0007887 vs. TAIR 10
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 3.8e-47
Identity = 98/199 (49.25%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 1   MEAMVKKYQQKFRKFKDEMDRWDEFQVLLISHFTNASSIIGRLQVIQDPKNYGSLSGMDG 60
           MEA+++K+QQKFRK K+EM++W+  QV  +S F NASSII RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IEDAVLAKQLGSLQLSYTSIRNTMEELGNIFRSMEKIYRDGKQLIKSGSDQPSKKQLQQR 120
           IEDAV+ +Q+G L+    S++N MEE      + EK++RDG QL +  S   SK+++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIES---SKRRVEER 120

Query: 121 VGIKPSIEVCVHGLKLLCDMHRSEYHLKESIVSALRELFWKPGNHRAQDLSSLQQLLIDQ 180
           +G+KP I  C+ GL +L DMH+SEYHLK SI+S L  L  KP      DL++LQ L++DQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKPS---PGDLNALQYLVVDQ 180

Query: 181 PNIPKEEVELIYDIILVPE 200
           PNIPK+EV+ I+D+I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

The following BLAST results are available for this feature:

BLAST of Sed0007887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928127.1	3.0e-86	83.00	uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]	[more]
XP_022989465.1	7.3e-85	81.50	uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima]	[more]
XP_023529794.1	4.4e-82	81.00	uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529795.1 u...	[more]
XP_022136277.1	2.2e-81	78.50	uncharacterized protein At5g43822 isoform X1 [Momordica charantia]	[more]
XP_022928123.1	4.9e-81	83.42	uncharacterized protein At5g43822 isoform X1 [Cucurbita moschata] >XP_022928124....	[more]

BLAST of Sed0007887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPG7	5.3e-46	49.25	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 P...	[more]

BLAST of Sed0007887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ12	1.4e-86	83.00	uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JMF9	3.5e-85	81.50	uncharacterized protein At5g43822 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1C552	1.1e-81	78.50	uncharacterized protein At5g43822 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1EQT0	2.4e-81	83.42	uncharacterized protein At5g43822 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1EJF6	2.4e-81	83.42	uncharacterized protein At5g43822 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0007887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43822.1	3.8e-47	49.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029159	Casein Kinase 2 substrate	PFAM	PF15011	CK2S	coord: 11..130 e-value: 1.0E-23 score: 84.1
None	No IPR available	PANTHER	PTHR37904:SF2	OS10G0566900 PROTEIN	coord: 10..155
IPR038985	At5g43822-like	PANTHER	PTHR37904	OS10G0566900 PROTEIN	coord: 10..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007887.1	Sed0007887.1	mRNA
Sed0007887.2	Sed0007887.2	mRNA
Sed0007887.3	Sed0007887.3	mRNA
Sed0007887.4	Sed0007887.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005635	nuclear envelope