PI0023936 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGTCGTAGAGTATGAGAAAATTTTTGCTGAATTGGCTAAGTATGTGTTAGCCTTTGTGATTGATGAGACAGATAAATGCAAATGGTTTGAAGATGGTTTGCGAACGAAAATTAGAGCCCTAATGACGACCAACATGGACTGGTCAGATTTCTCCAAATTAGTTGAAACTGCCATGAGAGTTGAGAAGTGTTTGGCAAAGGAAAAGAAAAACAAGAATGCAAATGAAGGCCCATGCGTTCAAAATGGTAGTAACGTGCGAGGTGGTGAGTGA ATGATCGTCGTAGAGTATGAGAAAATTTTTGCTGAATTGGCTAAGTATGTGTTAGCCTTTGTGATTGATGAGACAGATAAATGCAAATGGTTTGAAGATGGTTTGCGAACGAAAATTAGAGCCCTAATGACGACCAACATGGACTGGTCAGATTTCTCCAAATTAGTTGAAACTGCCATGAGAGTTGAGAAGTGTTTGGCAAAGGAAAAGAAAAACAAGAATGCAAATGAAGGCCCATGCGTTCAAAATGGTAGTAACGTGCGAGGTGGTGAGTGA ATGATCGTCGTAGAGTATGAGAAAATTTTTGCTGAATTGGCTAAGTATGTGTTAGCCTTTGTGATTGATGAGACAGATAAATGCAAATGGTTTGAAGATGGTTTGCGAACGAAAATTAGAGCCCTAATGACGACCAACATGGACTGGTCAGATTTCTCCAAATTAGTTGAAACTGCCATGAGAGTTGAGAAGTGTTTGGCAAAGGAAAAGAAAAACAAGAATGCAAATGAAGGCCCATGCGTTCAAAATGGTAGTAACGTGCGAGGTGGTGAGTGA MIVVEYEKIFAELAKYVLAFVIDETDKCKWFEDGLRTKIRALMTTNMDWSDFSKLVETAMRVEKCLAKEKKNKNANEGPCVQNGSNVRGGE Homology
BLAST of PI0023936 vs. ExPASy TrEMBL
Match: A0A5A7V3F2 (Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00210 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.7e-23 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of PI0023936 vs. ExPASy TrEMBL
Match: A0A5A7V373 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003760 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19 Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of PI0023936 vs. ExPASy TrEMBL
Match: A0A5D3BZ05 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002070 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19 Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of PI0023936 vs. ExPASy TrEMBL
Match: A0A5D3D2P1 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00770 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of PI0023936 vs. ExPASy TrEMBL
Match: A0A5D3DEF9 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00160 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.6e-14 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of PI0023936 vs. NCBI nr
Match: KAA0062762.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa] >TYK08836.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 3.6e-23 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of PI0023936 vs. NCBI nr
Match: KAA0062038.1 (hypothetical protein E6C27_scaffold89G003760 [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 5.4e-19 Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of PI0023936 vs. NCBI nr
Match: TYK04983.1 (uncharacterized protein E5676_scaffold143G002070 [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 5.4e-19 Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of PI0023936 vs. NCBI nr
Match: KAA0031989.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK16809.1 putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 3.0e-17 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of PI0023936 vs. NCBI nr
Match: TYK21986.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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