PI0014140 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGTTCTCCCTTTCTTCCAAGCTCCAACCTAAGTCGAGCGAAACCGGCAAAAACCCTAGCACTCACCGTCGTCTTTATCGGAGCAAAATGGCCTCAGGTCTTAGCAATGGCACCAAGTTCTTCAAAGGCTGCAGAACTCTCTTAGATTCTTTCAAATCCACCACTCAAGCTTACTCTTCCACTCCTGCGGTCTCTCCCAAGAGGAAGCTCAAACCCTCAAGTGCCAACGTTTCGGGCCAAAAATTGGAAGCCGGAACACAGAAAGGTTCGATTCTGAAGCCTTGCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCCAGTCCGAGATTTCGCGCCCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAAAAACCTCCAGGTTACTTTGATTTCTCTTTTGTTCTAACCGACATGGCTATTTTTTTAGTATCGTTTTTCTACTTCCTTCTTTGCTGCAATCTCTTCGTTCGGGTTGTTATTTTAACTTAGCCTAGAACTTGAGGTTTAGGGTGTTGTGTTCATTCGTAGTGTATCAAATGTTAGTTCTCTGTGAGCCGATTCTCTCTTTCAGTCCTCAGTTGCTCAATTGAAGGTCTCTGGAATGGATGTTCTGAATTTGAAAACTAGGTTAAAGTATAGGTGAAACTCACTATTCGCGAATCAAATAATCTACATACCTGTTCGCAAGTTTCAACTGGCTTGAATAATGAACAAGCTATTCAGGTGGTGAATGCATTTATTTAGCAGTATCGTTTAAAGGATTGAATGCTACTGTGTGACCTTATCTTTTCACATGGATTCGGGTTTGAGCTCTGTTTTGAAAAAGTTAGCTGCTACATAGAGCTGGGAGGGAGAACCTACGAAAACCCTCCTGATGACTAATTTTGAGTATAAATACTTTCATTGAAGTTCATGAAAAGCTAAACCAGGATTTTCTGTCGCTTAATCAAATGAAATAGATATGTTGGCTACGAGTTTCTCAAGGACGTGAGGTGAATATGCAGATACACAGATTATCAAGCAAAAGAAGCTTGAGCTTCTCTCACATTGCCCTATAATGTGTTTTTTTTCTTGGAAACAGCATGAAAGTGAAACACTTGAAGCTTATTTTTGCTCATCAATTGACATTGTGGTAAATGTATCAATATATTGACGGTGTTGAGTAGTTGAAACAGTAGTTGTCTCGTGTCTGCCACATCTAAAACAGTCAGTCAATTTATCTAATGTGTGTGTCATGTTAAGTATTCTATTAATGGTGTTAACTGTAGAGATTGAGGGGCTACTTCGGCTCCAACTTCAAGTGGGTGTTATAGGTCACCCCATGTTTAGGACTCCAATAATAATATTTGGGGGAATGGTTGATTTATGGAGGGCTAGTGAGTTTTATCATAAAACAAGTGTTATGATAATATGCCTTTGGGGGAAGGTTTATGTTAAGTGTTATGATAGTTGGGCAACATGGAGGTGTGAATTACACTACTTGTTTGACAGAGGAATGCGTAGGGCCCCACGACTAAAAAACATCGGTTTTTGTCTTGTTTAACACTAGGACCTAGAAATTAACATTGTATTAATCCTTTTCTTTTTGTGAATTTGGAAGATTTTGCTGATTGATACCCATGTATATTACATTTTGGTGTGCAGAACCCAACTGATAAGAGGCAGATCATTTGTGATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAAAAAGTGGGAATGCTTGAGATTGCAAAATTTCTATCCATCCATTTTGTGAAATCTGGTTAACCTAAGCTTTCAGTGCAACTAATGCTTCTCTCTAAACCTCTCTTCCAAATCCTTAACGATGTTTTGTTATATTTTGTTTGGCCGATCCTAGGACATCGCCTTTACTTTTTGGTTTTACTCTGATTTAGGAAGAGTGGGCGTTTCTTGTTCAGACATTGTTGACTATTAGTATTCTATAATTAATTAAGGTAGCTTTTCTGTCTTAATTAATTTTGGGGATGTATTGATCGTTGTGGACTTCAAATTGATATTTGTTAAGGTAAATGCAATTTATTAGTAGGTTGAATGGTAATTCTAATTATTAAAGTGAACCTAGCTCAATGGTTTCATCACTACAATCGCTGAAAAGATGGTAAATGTAATTTAATGCTAAGTTGTAAGTGTAATTTAGTATATGAATACTTGAATTTTCAATCATGTGTATGATCTTGAAGAAAAATATGTTTCTAAATTGAAATTCAAAGTAGAGACTCGGAAATTCAAATCTACACAATAA CTCGTTCTCCCTTTCTTCCAAGCTCCAACCTAAGTCGAGCGAAACCGGCAAAAACCCTAGCACTCACCGTCGTCTTTATCGGAGCAAAATGGCCTCAGGTCTTAGCAATGGCACCAAGTTCTTCAAAGGCTGCAGAACTCTCTTAGATTCTTTCAAATCCACCACTCAAGCTTACTCTTCCACTCCTGCGGTCTCTCCCAAGAGGAAGCTCAAACCCTCAAGTGCCAACGTTTCGGGCCAAAAATTGGAAGCCGGAACACAGAAAGGTTCGATTCTGAAGCCTTGCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCCAGTCCGAGATTTCGCGCCCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAAAAACCTCCAGAACCCAACTGATAAGAGGCAGATCATTTGTGATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAAAAAGTGGGAATGCTTGAGATTGCAAAATTTCTATCCATCCATTTTGTGAAATCTGGTTAACCTAAGCTTTCAGTGCAACTAATGCTTCTCTCTAAACCTCTCTTCCAAATCCTTAACGATGTTTTGTTATATTTTGTTTGGCCGATCCTAGGACATCGCCTTTACTTTTTGGTTTTACTCTGATTTAGGAAGAGTGGGCGTTTCTTGTTCAGACATTGTTGACTATTAGTATTCTATAATTAATTAAGGTAGCTTTTCTGTCTTAATTAATTTTGGGGATGTATTGATCGTTGTGGACTTCAAATTGATATTTGTTAAGGTAAATGCAATTTATTAGTAGGTTGAATGGTAATTCTAATTATTAAAGTGAACCTAGCTCAATGGTTTCATCACTACAATCGCTGAAAAGATGGTAAATGTAATTTAATGCTAAGTTGTAAGTGTAATTTAGTATATGAATACTTGAATTTTCAATCATGTGTATGATCTTGAAGAAAAATATGTTTCTAAATTGAAATTCAAAGTAGAGACTCGGAAATTCAAATCTACACAATAA ATGGCCTCAGGTCTTAGCAATGGCACCAAGTTCTTCAAAGGCTGCAGAACTCTCTTAGATTCTTTCAAATCCACCACTCAAGCTTACTCTTCCACTCCTGCGGTCTCTCCCAAGAGGAAGCTCAAACCCTCAAGTGCCAACGTTTCGGGCCAAAAATTGGAAGCCGGAACACAGAAAGGTTCGATTCTGAAGCCTTGCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCCAGTCCGAGATTTCGCGCCCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAAAAACCTCCAGAACCCAACTGATAAGAGGCAGATCATTTGTGATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAAAAAGTGGGAATGCTTGAGATTGCAAAATTTCTATCCATCCATTTTGTGAAATCTGGTTAA MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG Homology
BLAST of PI0014140 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.2e-13 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.7e-11 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10 Identity = 44/132 (33.33%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy Swiss-Prot
Match: Q9FMT4 (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14170 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.4e-05 Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy TrEMBL
Match: A0A0A0KCY9 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078570 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.2e-52 Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy TrEMBL
Match: A0A5D3DMJ2 (Protein TRI1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00610 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50 Identity = 110/146 (75.34%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy TrEMBL
Match: A0A1S3CBA0 (protein TRI1-like OS=Cucumis melo OX=3656 GN=LOC103499003 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50 Identity = 110/146 (75.34%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy TrEMBL
Match: A0A6J1KHF5 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111494404 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.6e-46 Identity = 105/145 (72.41%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of PI0014140 vs. ExPASy TrEMBL
Match: A0A6J1KEZ2 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111494406 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45 Identity = 104/145 (71.72%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of PI0014140 vs. NCBI nr
Match: XP_004154030.1 (upstream activation factor subunit UAF30 isoform X1 [Cucumis sativus] >KGN46262.1 hypothetical protein Csa_005564 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of PI0014140 vs. NCBI nr
Match: XP_008460088.1 (PREDICTED: protein TRI1-like [Cucumis melo] >KAA0039983.1 protein TRI1-like [Cucumis melo var. makuwa] >TYK24519.1 protein TRI1-like [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50 Identity = 110/146 (75.34%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of PI0014140 vs. NCBI nr
Match: KAG6593745.1 (hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47 Identity = 108/145 (74.48%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of PI0014140 vs. NCBI nr
Match: XP_023514456.1 (upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.7 bits (504), Expect = 3.2e-47 Identity = 107/145 (73.79%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of PI0014140 vs. NCBI nr
Match: KAG6593744.1 (hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46 Identity = 106/145 (73.10%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of PI0014140 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 5.7e-26 Identity = 64/134 (47.76%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of PI0014140 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of PI0014140 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of PI0014140 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of PI0014140 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18 Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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