Moc11g31860 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g31860
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr11: 23247979 .. 23249439 (-)
RNA-Seq ExpressionMoc11g31860
SyntenyMoc11g31860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCACAACCACTCATCCCCGTCTTCAAAGGAGAAGGCTACGAATTCGTATGAGGACTCTACTCAAATCTCAAGACTTATGGGAGTTGGTGGAATAAGGCTATGCAAATCCCGAGCACGAAGGCAAGCTGCTGGAGAACAAGAAGAAGGATTCCAAGGCGTTTGTGATCATTCAACAGGCGGTCCATGACAGCGTCTTCTCGCGAATTGCAGCAGCAACAATGTCAAAGCAGACATGGTCTATTTTGTAGGAGTTCCAAGACAATTCAAAGGTCGTCATGGTGAGATTGCAATCACTCAGACGTGACTTTGAGACCTTGATGATGAAGAATGAAGAATAAGTCGCTAATTTTTTGTCAAGAGCAACGACAATAGTTAGTCAAATGTGGCCCTACGACGAGACGATTACCGACCAGATCATTGTTGAAAAGGTACTTAGAAGTTTGACTCCAAAATTTGATCATGTAGTAGCTGCCATAGAAGAATTAAAGGATTTGTGAGTTTTTACATTTGATGAACTAATGGAGTCTCTTTAAGCTCATGAGTCGAGGATTAATAGATTGCTCAAAAAGACCGAACAAAAAGCATTTCAGGTGAAAGAGGCAGCTCCCAAATCCGGACAAGGTGATCATTTGGTGAATCGAGGCTGTGGAAGAGGAGGATTTCGTGGTCAAGGTCGTGGTTTCTGAAGAGGCAGAGGAAGATTCAAAGGACAAAGGCAGTCCTACGAGCAAACAAGCAACAAGAATGAAGTTCGATGTTACCACTGCAAAAGATATGGTCACATAAAGACGGACTGCTGATACAATGATCAGAGAGCCAATTTCGCTATAGAGAAGAAAGTATCGACAAATGCTAGAAGTAGTAAGCTTTTTATGGCTCATGTTAAAAACTAACCAAAAGCCAAGTGGTGTCTTGTTTGTAGATAGTGGTTGCTCAAATCACATTACAGACAAGATCCATCTTCAGAAAACTTGATGAGGCAGAAAAGATGAAGGTGCAACTCAGAAACGACAAGGATCTACAAGTTGAAGGAAGAAGTACGGTGGGTATTGAAACTAGCCATGGTAAACTGAAGCTCCTTCATAATGTTCAATTTTTACCCGATTTAGGATACAATTTATTGAGTGTTGGACAACTAATGACTAGTGGACATTCCATAATATTTGATGATGATGTCTGTGTGATCAAAGATAAACAAACAAGTCAACAGATGGTTCGAGTTAAGATGACCCAAAGCAAAATGTTCCCATTCGAAGTCTCAAATGTGGGAAGTTTTGTTCTTGCTGCTGAAGGAAAAGATGACTCGAAGTTGTGTCACTTGCGATATGGGCATCTCAACATCAAGGGTTTGTCATTGCTAATCATAGAGGTATGGTTCTTGGGCTACCAAAAATTGTCTCTATTGATTTATGTGAAGGGTGCATTATGGAAAACAAATCCGGAAGTCTTTTCCTAG

mRNA sequence

ATGCGGCACAACCACTCATCCCCGTCTTCAAAGGAGAAGGCTACGAATTCGTATGAGGACTCTACTCAAATCTCAAGACTTATGGGAGTTGGTGGAATAAGGCTATGCAAATCCCGAGCACGAAGGCAAGCTGCTGGAGAACAAGAAGAAGGATTCCAAGGCATAGTGGTTGCTCAAATCACATTACAGACAAGATCCATCTTCAGAAAACTTGATGAGGCAGAAAAGATGAAGGTGCAACTCAGAAACGACAAGGATCTACAAGTTGAAGGAAGAAGTACGGTGGGTATTGAAACTAGCCATGGTAAACTGAAGCTCCTTCATAATGTTCAATTTTTACCCGATTTAGGATACAATTTATTGAGTGTTGGACAACTAATGACTAGTGGACATTCCATAATATTTGATGATGATGTCTGTGTGATCAAAGATAAACAAACAAGTCAACAGATGGTTCGAGTTAAGATGACCCAAAGCAAAATGTTCCCATTCGAAGTCTCAAATGTGGGAAGTTTTGTTCTTGCTGCTGAAGGAAAAGATGACTCGAAGTTGTGTCACTTGCGATATGGGCATCTCAACATCAAGGGTTTGTCATTGCTAATCATAGAGGTATGGTTCTTGGGCTACCAAAAATTGTCTCTATTGATTTATGTGAAGGGTGCATTATGGAAAACAAATCCGGAAGTCTTTTCCTAG

Coding sequence (CDS)

ATGCGGCACAACCACTCATCCCCGTCTTCAAAGGAGAAGGCTACGAATTCGTATGAGGACTCTACTCAAATCTCAAGACTTATGGGAGTTGGTGGAATAAGGCTATGCAAATCCCGAGCACGAAGGCAAGCTGCTGGAGAACAAGAAGAAGGATTCCAAGGCATAGTGGTTGCTCAAATCACATTACAGACAAGATCCATCTTCAGAAAACTTGATGAGGCAGAAAAGATGAAGGTGCAACTCAGAAACGACAAGGATCTACAAGTTGAAGGAAGAAGTACGGTGGGTATTGAAACTAGCCATGGTAAACTGAAGCTCCTTCATAATGTTCAATTTTTACCCGATTTAGGATACAATTTATTGAGTGTTGGACAACTAATGACTAGTGGACATTCCATAATATTTGATGATGATGTCTGTGTGATCAAAGATAAACAAACAAGTCAACAGATGGTTCGAGTTAAGATGACCCAAAGCAAAATGTTCCCATTCGAAGTCTCAAATGTGGGAAGTTTTGTTCTTGCTGCTGAAGGAAAAGATGACTCGAAGTTGTGTCACTTGCGATATGGGCATCTCAACATCAAGGGTTTGTCATTGCTAATCATAGAGGTATGGTTCTTGGGCTACCAAAAATTGTCTCTATTGATTTATGTGAAGGGTGCATTATGGAAAACAAATCCGGAAGTCTTTTCCTAG

Protein sequence

MRHNHSSPSSKEKATNSYEDSTQISRLMGVGGIRLCKSRARRQAAGEQEEGFQGIVVAQITLQTRSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVGQLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEGKDDSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALWKTNPEVFS
Homology
BLAST of Moc11g31860 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-42
Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+LRN K+LQVEG+ TV IET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 422 KPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGN-RILTNVQYVPDIGYNLLSVG 481

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 482 QLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVESFALTATATNTTKN 541

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   +G ++
Sbjct: 542 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICEGCVY 583

BLAST of Moc11g31860 vs. NCBI nr
Match: KAA0032274.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-41
Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K+LQVEG+ TVGIET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 235 KPVFKELNEGEKLKVELGNGKELQVEGKGTVGIETHHGN-RILTNVQYVPDIGYNLLSVG 294

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 295 QLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVKSFALIATATNTTKN 354

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +SKL +LRYGHLNIKG SLL      +G  K+S +   +G ++
Sbjct: 355 NSKLWYLRYGHLNIKGFSLLKQRDMVIGLPKISAINICEGCVY 396

BLAST of Moc11g31860 vs. NCBI nr
Match: KAA0045239.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK19267.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 7.4e-41
Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++ +E EK+KV+L N K+LQVEG+ TVGIET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 151 KPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGN-RILTNVQYVPDIGYNLLSVG 210

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + +V+VKMTQSKMFP EV NV +F L A      K+
Sbjct: 211 QLMESGYSILFDDGACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKN 270

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +SKL +LRYGHLNIKGLSLL      +G  K++ +   +G ++
Sbjct: 271 NSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVY 312

BLAST of Moc11g31860 vs. NCBI nr
Match: KAA0054939.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK22728.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-40
Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K+LQVEG+  VGIET HG  ++L NVQF+PD+GYNLLSVG
Sbjct: 194 KPVFKELNEGEKLKVELGNGKELQVEGKGMVGIETHHGN-RILTNVQFVPDIGYNLLSVG 253

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD   +IK+KQT + +V+VKMTQSKMFP EVSNV SF L        K+
Sbjct: 254 QLMESGYSILFDDGAYLIKNKQTGRVLVKVKMTQSKMFPLEVSNVESFALTTTATNTTKN 313

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   +G ++
Sbjct: 314 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICEGCVY 355

BLAST of Moc11g31860 vs. NCBI nr
Match: TYK00906.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 176.0 bits (445), Expect = 3.7e-40
Identity = 93/163 (57.06%), Postives = 121/163 (74.23%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K LQVEG+ TV IET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 28  KPVFKELNEGEKLKVELGNGKVLQVEGKGTVEIETHHGN-RILTNVQYVPDIGYNLLSVG 87

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM S +SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 88  QLMESRYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVESFALTATATNTTKN 147

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   KG ++
Sbjct: 148 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICKGCVY 189

BLAST of Moc11g31860 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.3e-42
Identity = 94/163 (57.67%), Postives = 124/163 (76.07%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+LRN K+LQVEG+ TV IET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 422 KPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGN-RILTNVQYVPDIGYNLLSVG 481

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 482 QLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVESFALTATATNTTKN 541

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   +G ++
Sbjct: 542 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICEGCVY 583

BLAST of Moc11g31860 vs. ExPASy TrEMBL
Match: A0A5A7SM62 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001140 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K+LQVEG+ TVGIET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 235 KPVFKELNEGEKLKVELGNGKELQVEGKGTVGIETHHGN-RILTNVQYVPDIGYNLLSVG 294

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 295 QLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVKSFALIATATNTTKN 354

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +SKL +LRYGHLNIKG SLL      +G  K+S +   +G ++
Sbjct: 355 NSKLWYLRYGHLNIKGFSLLKQRDMVIGLPKISAINICEGCVY 396

BLAST of Moc11g31860 vs. ExPASy TrEMBL
Match: A0A5A7TVH1 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00750 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-41
Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++ +E EK+KV+L N K+LQVEG+ TVGIET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 151 KPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGN-RILTNVQYVPDIGYNLLSVG 210

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD  C+IK+KQT + +V+VKMTQSKMFP EV NV +F L A      K+
Sbjct: 211 QLMESGYSILFDDGACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKN 270

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +SKL +LRYGHLNIKGLSLL      +G  K++ +   +G ++
Sbjct: 271 NSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVY 312

BLAST of Moc11g31860 vs. ExPASy TrEMBL
Match: A0A5A7UN91 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00520 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.0e-41
Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K+LQVEG+  VGIET HG  ++L NVQF+PD+GYNLLSVG
Sbjct: 194 KPVFKELNEGEKLKVELGNGKELQVEGKGMVGIETHHGN-RILTNVQFVPDIGYNLLSVG 253

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM SG+SI+FDD   +IK+KQT + +V+VKMTQSKMFP EVSNV SF L        K+
Sbjct: 254 QLMESGYSILFDDGAYLIKNKQTGRVLVKVKMTQSKMFPLEVSNVESFALTTTATNTTKN 313

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   +G ++
Sbjct: 314 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICEGCVY 355

BLAST of Moc11g31860 vs. ExPASy TrEMBL
Match: A0A5D3BRM6 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00690 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.8e-40
Identity = 93/163 (57.06%), Postives = 121/163 (74.23%), Query Frame = 0

Query: 65  RSIFRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVG 124
           + +F++L+E EK+KV+L N K LQVEG+ TV IET HG  ++L NVQ++PD+GYNLLSVG
Sbjct: 28  KPVFKELNEGEKLKVELGNGKVLQVEGKGTVEIETHHGN-RILTNVQYVPDIGYNLLSVG 87

Query: 125 QLMTSGHSIIFDDDVCVIKDKQTSQQMVRVKMTQSKMFPFEVSNVGSFVLAAEG----KD 184
           QLM S +SI+FDD  C+IK+KQT + + +VKMTQSKMFP EVSNV SF L A      K+
Sbjct: 88  QLMESRYSILFDDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVESFALTATATNTTKN 147

Query: 185 DSKLCHLRYGHLNIKGLSLLIIEVWFLGYQKLSLLIYVKGALW 224
           +S+L HLRYGHLNIKGLSLL      +G  K+S +   KG ++
Sbjct: 148 NSELWHLRYGHLNIKGLSLLNQRDMVIGLPKISAINICKGCVY 189

BLAST of Moc11g31860 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 25/66 (37.88%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 68  FRKLDEAEKMKVQLRNDKDLQVEGRSTVGIETSHGKLKLLHNVQFLPDLGYNLLSVGQLM 127
           F  LD   K  V   +   L VEG+  V I    GK K + NV F+P L  N+LS G+++
Sbjct: 297 FTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMV 356

Query: 128 TSGHSI 134
           +  +SI
Sbjct: 357 SKRYSI 362

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK27735.18.8e-4257.67putative gag-pol polyprotein, identical [Cucumis melo var. makuwa][more]
KAA0032274.12.6e-4157.06putative gag-pol polyprotein, identical [Cucumis melo var. makuwa][more]
KAA0045239.17.4e-4155.83putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK19267.1 p... [more]
KAA0054939.11.7e-4057.06putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK22728.1 p... [more]
TYK00906.13.7e-4057.06putative gag-pol polyprotein, identical [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DWP24.3e-4257.67Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7SM621.2e-4157.06Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7TVH13.6e-4155.83Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7UN918.0e-4157.06Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3BRM61.8e-4057.06Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... [more]
Match NameE-valueIdentityDescription
AT3G21000.12.7e-0437.88Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g31860.1Moc11g31860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding