Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATCTTTCGAACGTTGAAATCGCCCTAGCAAGCATTACCTGTTGGGCTATCTGGAATGACAAGAATTTGAAGTTAAACAAAAAGCAAGTTCTTGAGGTTTCTACCAAGGTCAACTGGATTATTGATTGTGCCAATGAGTTTTCTTCTAAAACAAGAAGGAGTCAAGCAATCGTAGCAACAATCTACCTCGAAGAAATGATTGGCTCTTCCCCCGTGGGTTTGGTGAAGATTAATACAGATGACGCCTGCAATAATCGTAGATCTAGTGTAGGGGTTCTGCTTAGGGATGAGAAGTCAGGTATTATAGCAGCTATGGTGGGTATTTATCTAGGGCGTTGTCCTCAAGTAGAGGAAATTACAACGATCCGAGATGGTTTGAGGCTGCTCTACAACTAG
mRNA sequence
ATGGAAAATCTTTCGAACGTTGAAATCGCCCTAGCAAGCATTACCTGTTGGGCTATCTGGAATGACAAGAATTTGAAGTTAAACAAAAAGCAAGTTCTTGAGGTTTCTACCAAGGTCAACTGGATTATTGATTGTGCCAATGAGTTTTCTTCTAAAACAAGAAGGAGTCAAGCAATCGTAGCAACAATCTACCTCGAAGAAATGATTGGCTCTTCCCCCGTGGGTTTGGTGAAGATTAATACAGATGACGCCTGCAATAATCGTAGATCTAGTGTAGGGGTTCTGCTTAGGGATGAGAAGTCAGGTATTATAGCAGCTATGGTGGGTATTTATCTAGGGCGTTGTCCTCAAGTAGAGGAAATTACAACGATCCGAGATGGTTTGAGGCTGCTCTACAACTAG
Coding sequence (CDS)
ATGGAAAATCTTTCGAACGTTGAAATCGCCCTAGCAAGCATTACCTGTTGGGCTATCTGGAATGACAAGAATTTGAAGTTAAACAAAAAGCAAGTTCTTGAGGTTTCTACCAAGGTCAACTGGATTATTGATTGTGCCAATGAGTTTTCTTCTAAAACAAGAAGGAGTCAAGCAATCGTAGCAACAATCTACCTCGAAGAAATGATTGGCTCTTCCCCCGTGGGTTTGGTGAAGATTAATACAGATGACGCCTGCAATAATCGTAGATCTAGTGTAGGGGTTCTGCTTAGGGATGAGAAGTCAGGTATTATAGCAGCTATGGTGGGTATTTATCTAGGGCGTTGTCCTCAAGTAGAGGAAATTACAACGATCCGAGATGGTTTGAGGCTGCTCTACAACTAG
Protein sequence
MENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRRSQAIVATIYLEEMIGSSPVGLVKINTDDACNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQVEEITTIRDGLRLLYN
Homology
BLAST of Moc06g16690 vs. NCBI nr
Match:
XP_022158489.1 (uncharacterized protein LOC111024968 [Momordica charantia])
HSP 1 Score: 94.7 bits (234), Expect = 6.2e-16
Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 1 MENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRR--SQA 60
M+NLS E+ L ITCWA+WND++ +NKK++ E KV WI+ A E K +
Sbjct: 1 MQNLSTSELRLTGITCWALWNDRDALINKKKIPEALIKVEWILKYAEEVRMKYHNGMKRR 60
Query: 61 IVATIYLEEMIGSSPVGLVKINTDDACNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQV 120
I +G G+VK+NTD A + S VGVLLR+ + I+ AMV ++ + P +
Sbjct: 61 IPRVNEWRPPLG----GVVKMNTDAAVSEEGSGVGVLLREGNAEIVGAMVDFHMVKTPLL 120
Query: 121 EEITTIRDGLRL 131
+I IR+GL L
Sbjct: 121 AKILAIREGLSL 128
BLAST of Moc06g16690 vs. NCBI nr
Match:
XP_022141766.1 (uncharacterized protein LOC111012047 [Momordica charantia])
HSP 1 Score: 86.7 bits (213), Expect = 1.7e-13
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0
Query: 2 ENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRRSQAIVA 61
ENL+ E+ LA I CWA WND+N + N V +V T+ +WI + A E ++ R++
Sbjct: 21 ENLTLEELLLAGIICWANWNDRNQRNNGIDVADVHTESDWITNYAMELLTRRRKTNEAQK 80
Query: 62 TIYLEEMIGSSPVGLVKINTDDA--CNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQVE 121
+ + G VK+N D A N+R VGVL+RD+++ I+AA++ + P +
Sbjct: 81 NLPCLAIWKPPSKGTVKLNVDAAFDVRNQRGGVGVLVRDDRNSILAALISSHNVNSPLLA 140
Query: 122 EITTIRDGLRL 131
EI IR+ +RL
Sbjct: 141 EICAIREAVRL 151
BLAST of Moc06g16690 vs. NCBI nr
Match:
XP_022155289.1 (uncharacterized protein LOC111022426 [Momordica charantia])
HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 0
Query: 1 MENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRRSQAIV 60
M+NLS + LA ITCWA+WND N +NKK++ E K RR +
Sbjct: 85 MKNLSASNLRLAEITCWALWNDHNALINKKKIPEAPIK---------------RRIPRVN 144
Query: 61 ATIYLEEMIGSSPVG-LVKINTDDACNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQVE 120
A P+G +VK+NTD A + S VGVLLRD + I+AAM+ ++ + P +
Sbjct: 145 AW-------RPPPLGCVVKMNTDAAVSTEGSGVGVLLRDGNAEIVAAMIDFHVVKTPLLT 193
Query: 121 EITTIRDGLRL 131
EI IR+GLRL
Sbjct: 205 EILAIREGLRL 193
BLAST of Moc06g16690 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 65.1 bits (157), Expect = 5.3e-07
Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 2 ENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCAN-----EFSSKTRRS 61
E L ++ LA+IT W IWND+N ++ KQV V K W+ + + S+ + R+
Sbjct: 1224 EQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRT 1283
Query: 62 QAIVATIYLEEMIGSSPVGLVKINTDDACNNRRSSVGVLLRDEKSGIIAA-MVGIYLGRC 121
Q+ + ++ SS V L K+NTD AC +S G ++RD ++AA + +
Sbjct: 1284 QSNHRPV-VQYWRPSSSVSL-KLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLS 1343
Query: 122 PQVEEITTIRDGLR 130
P + EI I +GL+
Sbjct: 1344 PLLAEIRCILEGLK 1355
BLAST of Moc06g16690 vs. ExPASy TrEMBL
Match:
A0A6J1DZK3 (uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024968 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 3.0e-16
Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 1 MENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRR--SQA 60
M+NLS E+ L ITCWA+WND++ +NKK++ E KV WI+ A E K +
Sbjct: 1 MQNLSTSELRLTGITCWALWNDRDALINKKKIPEALIKVEWILKYAEEVRMKYHNGMKRR 60
Query: 61 IVATIYLEEMIGSSPVGLVKINTDDACNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQV 120
I +G G+VK+NTD A + S VGVLLR+ + I+ AMV ++ + P +
Sbjct: 61 IPRVNEWRPPLG----GVVKMNTDAAVSEEGSGVGVLLREGNAEIVGAMVDFHMVKTPLL 120
Query: 121 EEITTIRDGLRL 131
+I IR+GL L
Sbjct: 121 AKILAIREGLSL 128
BLAST of Moc06g16690 vs. ExPASy TrEMBL
Match:
A0A6J1CK80 (uncharacterized protein LOC111012047 OS=Momordica charantia OX=3673 GN=LOC111012047 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0
Query: 2 ENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRRSQAIVA 61
ENL+ E+ LA I CWA WND+N + N V +V T+ +WI + A E ++ R++
Sbjct: 21 ENLTLEELLLAGIICWANWNDRNQRNNGIDVADVHTESDWITNYAMELLTRRRKTNEAQK 80
Query: 62 TIYLEEMIGSSPVGLVKINTDDA--CNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQVE 121
+ + G VK+N D A N+R VGVL+RD+++ I+AA++ + P +
Sbjct: 81 NLPCLAIWKPPSKGTVKLNVDAAFDVRNQRGGVGVLVRDDRNSILAALISSHNVNSPLLA 140
Query: 122 EITTIRDGLRL 131
EI IR+ +RL
Sbjct: 141 EICAIREAVRL 151
BLAST of Moc06g16690 vs. ExPASy TrEMBL
Match:
A0A6J1DPU1 (uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022426 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 5.3e-13
Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 0
Query: 1 MENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCANEFSSKTRRSQAIV 60
M+NLS + LA ITCWA+WND N +NKK++ E K RR +
Sbjct: 85 MKNLSASNLRLAEITCWALWNDHNALINKKKIPEAPIK---------------RRIPRVN 144
Query: 61 ATIYLEEMIGSSPVG-LVKINTDDACNNRRSSVGVLLRDEKSGIIAAMVGIYLGRCPQVE 120
A P+G +VK+NTD A + S VGVLLRD + I+AAM+ ++ + P +
Sbjct: 145 AW-------RPPPLGCVVKMNTDAAVSTEGSGVGVLLRDGNAEIVAAMIDFHVVKTPLLT 193
Query: 121 EITTIRDGLRL 131
EI IR+GLRL
Sbjct: 205 EILAIREGLRL 193
BLAST of Moc06g16690 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 2 ENLSNVEIALASITCWAIWNDKNLKLNKKQVLEVSTKVNWIIDCAN-----EFSSKTRRS 61
E L ++ LA+IT W IWND+N ++ KQV V K W+ + + S+ + R+
Sbjct: 1224 EQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRT 1283
Query: 62 QAIVATIYLEEMIGSSPVGLVKINTDDACNNRRSSVGVLLRDEKSGIIAA-MVGIYLGRC 121
Q+ + ++ SS V L K+NTD AC +S G ++RD ++AA + +
Sbjct: 1284 QSNHRPV-VQYWRPSSSVSL-KLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLS 1343
Query: 122 PQVEEITTIRDGLR 130
P + EI I +GL+
Sbjct: 1344 PLLAEIRCILEGLK 1355
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158489.1 | 6.2e-16 | 39.39 | uncharacterized protein LOC111024968 [Momordica charantia] | [more] |
XP_022141766.1 | 1.7e-13 | 35.88 | uncharacterized protein LOC111012047 [Momordica charantia] | [more] |
XP_022155289.1 | 1.1e-12 | 39.69 | uncharacterized protein LOC111022426 [Momordica charantia] | [more] |
XP_022158377.1 | 5.3e-07 | 32.09 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DZK3 | 3.0e-16 | 39.39 | uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1CK80 | 8.2e-14 | 35.88 | uncharacterized protein LOC111012047 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1DPU1 | 5.3e-13 | 39.69 | uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DX30 | 2.6e-07 | 32.09 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |