Moc04g38960 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGTTTGGGTTTTCTTCTGCTCTCTGTTTCCGCCATGGCATTCATTCATTGCCCTGTTTGTTCTCTGTTCCGTTCAGTCTTCTCTTTTGGGTTTAATGATCCTTCAATCCATATATCTGAATTTAGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGGTCAGAGCAAAAATATTCCGACCCTGTTTTGTGATTGTTTACAGGCCTTGTTTGCCTGTTCTAAATCTCTCTGCTAAACAAAATTTTATTCTGATTCATGTAGTTTTCGAAGATTTATTTGATTTCAATCAGCAATTGAAAATAAACTTAAATCATAGGATTAAGATTCGTAATTTAACCATCTCTTTTGTATTCAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS Homology
BLAST of Moc04g38960 vs. NCBI nr
Match: XP_022133665.1 (uncharacterized protein At3g27210 isoform X2 [Momordica charantia]) HSP 1 Score: 463.0 bits (1190), Expect = 1.5e-126 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Moc04g38960 vs. NCBI nr
Match: XP_022133664.1 (uncharacterized protein LOC111006194 isoform X1 [Momordica charantia]) HSP 1 Score: 458.0 bits (1177), Expect = 4.8e-125 Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0
BLAST of Moc04g38960 vs. NCBI nr
Match: XP_038884376.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81 Identity = 168/235 (71.49%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of Moc04g38960 vs. NCBI nr
Match: XP_004138611.1 (uncharacterized protein LOC101209518 [Cucumis sativus] >KGN63176.1 hypothetical protein Csa_022322 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77 Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of Moc04g38960 vs. NCBI nr
Match: XP_008441350.1 (PREDICTED: uncharacterized protein LOC103485490 [Cucumis melo]) HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75 Identity = 160/238 (67.23%), Postives = 178/238 (74.79%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11 Identity = 56/147 (38.10%), Postives = 70/147 (47.62%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy TrEMBL
Match: A0A6J1BVV8 (uncharacterized protein At3g27210 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006194 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 7.3e-127 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy TrEMBL
Match: A0A6J1BWN1 (uncharacterized protein LOC111006194 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006194 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.3e-125 Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy TrEMBL
Match: A0A0A0LT18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77 Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy TrEMBL
Match: A0A1S3B2S0 (uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.0e-75 Identity = 160/238 (67.23%), Postives = 178/238 (74.79%), Query Frame = 0
BLAST of Moc04g38960 vs. ExPASy TrEMBL
Match: A0A6J1JW82 (uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 4.8e-70 Identity = 154/236 (65.25%), Postives = 170/236 (72.03%), Query Frame = 0
BLAST of Moc04g38960 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16 Identity = 73/229 (31.88%), Postives = 108/229 (47.16%), Query Frame = 0
BLAST of Moc04g38960 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 0
BLAST of Moc04g38960 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-12 Identity = 56/147 (38.10%), Postives = 70/147 (47.62%), Query Frame = 0
BLAST of Moc04g38960 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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