Moc04g38960.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g38960.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Triacylglycerol lipase 2-like
Location	chr4: 29057645 .. 29058658 (+)
Sequence length	693
RNA-Seq Expression	Moc04g38960.1
Synteny	Moc04g38960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGTTTGGGTTTTCTTCTGCTCTCTGTTTCCGCCATGGCATTCATTCATTGCCCTGTTTGTTCTCTGTTCCGTTCAGTCTTCTCTTTTGGGTTTAATGATCCTTCAATCCATATATCTGAATTTAGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGGTCAGAGCAAAAATATTCCGACCCTGTTTTGTGATTGTTTACAGGCCTTGTTTGCCTGTTCTAAATCTCTCTGCTAAACAAAATTTTATTCTGATTCATGTAGTTTTCGAAGATTTATTTGATTTCAATCAGCAATTGAAAATAAACTTAAATCATAGGATTAAGATTCGTAATTTAACCATCTCTTTTGTATTCAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA

mRNA sequence

ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA

Coding sequence (CDS)

ATGGGTTCGTGCGCTTCCCTTTACGGCAGATCGGCCGTGGTGAAGGCGCCGCCGCCGCCGGAGACTGTGACGGACAAGTTCGAGATTCCGCCCTCGCCCATCAAACACTTTAAGCTACAAACCAATACCGAATCCGCCATTAAAGACATCTCTGTAGTATCTCACCACAAGACGCCTTCTGGCAGTAAAGAAGAAGCGTTTTTTGATTCTCGGGCGTGGTTGGATTCTGATTGTGACGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAGCACTCCACTTCACCACCGCTTTCCGGCGGAAACTCCCCGAGCAAGTGGCGGCGACGACCAACTTCCCACTGTCAAATCCCCGCCATTGCCCGCGAAGAGGAGGAAGAAACTAGTAGAACTCTTCCGGGAGAGCCTCGGCGGCGATGCGAGTTTCGCTTTCCTAAACAGCGAGGAAAATCCGCCGGAGGATTTGACGAATGGAAAAGTCGATGAACCTTGCGTTTCAGGGGCTGCTTCGGTCTGCAGCAGCGGTAGGACCACAGCCGGCGCCGGCACTGAGTTGGGTGACGAGAAGGCGATCGGATTCGGGTCGAAGCTGTGCTGTCTTCCGGCGTTGGTTTCGCGTCACAGTTCGAGCGAGAGGAAGGAGGATTTGAAGGCTTCTGCCATGGCTGTCAATGGCGTATCTTGA

Protein sequence

MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS

Homology

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BLAST of Moc04g38960.1 vs. NCBI nr
Match: XP_022133665.1 (uncharacterized protein At3g27210 isoform X2 [Momordica charantia])

HSP 1 Score: 463.0 bits (1190), Expect = 1.5e-126
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60
           MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS
Sbjct: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60

Query: 61  GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS 120
           GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS
Sbjct: 61  GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS 120

Query: 121 PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT 180
           PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT
Sbjct: 121 PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT 180

Query: 181 TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS
Sbjct: 181 TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 230

[Close]

BLAST of Moc04g38960.1 vs. NCBI nr
Match: XP_022133664.1 (uncharacterized protein LOC111006194 isoform X1 [Momordica charantia])

HSP 1 Score: 458.0 bits (1177), Expect = 4.8e-125
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60
           MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS
Sbjct: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60

Query: 61  --GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV 120
             GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV
Sbjct: 61  GLGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV 120

Query: 121 KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG 180
           KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG
Sbjct: 121 KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG 180

Query: 181 RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS
Sbjct: 181 RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 232

[Close]

BLAST of Moc04g38960.1 vs. NCBI nr
Match: XP_038884376.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81
Identity = 168/235 (71.49%), Postives = 186/235 (79.15%), Query Frame = 0


Query: 1   MGSCASLYGRS--AVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVS-HHK 60
           MG+CAS+Y RS  + VK+P PPE++TDKFEIPPSPIKHFKLQ  T+SAIKDISV+S HHK
Sbjct: 1   MGTCASVYTRSECSAVKSPAPPESMTDKFEIPPSPIKHFKLQNKTDSAIKDISVISNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRAS--GGDDQL 120
           TPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPSCG+TPLHHRFPAETPR S  G D++ 
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVGADNEP 120

Query: 121 PTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVC 180
            T  SPPL  KRRKKLV+LFRESLG DASFAFLN ++       N K DEPC+SG  SVC
Sbjct: 121 STFNSPPLSTKRRKKLVDLFRESLGNDASFAFLNHDD-------NRKADEPCLSGTDSVC 180

Query: 181 SSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
            S RT +G     GDE  IGF SKLCCLP LVSR+SS ERKEDLK     VNGVS
Sbjct: 181 DSERTGSG-----GDENPIGFESKLCCLPPLVSRNSSRERKEDLK----VVNGVS 219

[Close]

BLAST of Moc04g38960.1 vs. NCBI nr
Match: XP_004138611.1 (uncharacterized protein LOC101209518 [Cucumis sativus] >KGN63176.1 hypothetical protein Csa_022322 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77
Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MGSCASLYGRS--AVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVV-SHHK 60
           MG+CASLY RS  + VK P PP+T TD+FEIPPSPIKHFKLQ NT+SAIKDISV+ +HHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRAS-----GGD 120
           TPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPSCG+TPLHHRFPAETPR S       D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120

Query: 121 DQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAA 180
           ++      PPLP KRRKKL +LFRESLG +ASFAFLN EE       N K DEP VSG  
Sbjct: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEE-------NRKADEPRVSGTD 180

Query: 181 SVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           SVC+S RT      +L DE  I   SK+CCLP L SR SS ERKEDLK     +NGVS
Sbjct: 181 SVCNSERTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLK----LINGVS 227

[Close]

BLAST of Moc04g38960.1 vs. NCBI nr
Match: XP_008441350.1 (PREDICTED: uncharacterized protein LOC103485490 [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75
Identity = 160/238 (67.23%), Postives = 178/238 (74.79%), Query Frame = 0


Query: 1   MGSCASLYGRS--AVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVV-SHHK 60
           MG+CASLY RS  + VK P PPET+TD+FEIPPSPIKHFKLQ NT+SAIKDISV+ +HHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPR-----ASGGD 120
           TPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPSCG+TPLHHRFPAETPR     AS  D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTD 120

Query: 121 DQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAA 180
           ++L     PPLP KRRKKL +LFRESLG + SFAFLN EE       N K DE  VSG  
Sbjct: 121 NELSNFSLPPLPPKRRKKLADLFRESLGNEGSFAFLNDEE-------NRKADEARVSGTD 180

Query: 181 SVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           SVC+S RT      +L DE  +   SK+CCLPALVSR    ERKEDLK     +NGVS
Sbjct: 181 SVCNSERTAGEGMDQLVDENPMELNSKMCCLPALVSR----ERKEDLK----LINGVS 223

[Close]

BLAST of Moc04g38960.1 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 56/147 (38.10%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 32  SPIKHFKLQTNTE-SAIKDISVVSHHKTPSGSKEEAFFDSRAWLDSDC-DDFFSVKGDFT 91
           SP K   +  N   + +K     S  K   GSK+E FFDS+ WL SD  DDF SV GDFT
Sbjct: 49  SPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFT 108

Query: 92  PSCGSTPLHHRFPAETPRASG---GDDQLPTVKSPPLPAKRRKKLVELFRESLGGDASFA 151
           PS G+TP    F    PR       + +     S P P  RRKKL ELFR+S+       
Sbjct: 109 PSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSI------- 168

Query: 152 FLNSEENPPEDLTNGKVDEPCVSGAAS 174
                E   E  ++  +  P +SGA S
Sbjct: 169 ----REEREESGSSSAISTPYLSGANS 183

[Close]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL
Match: A0A6J1BVV8 (uncharacterized protein At3g27210 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006194 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.3e-127
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60
           MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS
Sbjct: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60

Query: 61  GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS 120
           GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS
Sbjct: 61  GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKS 120

Query: 121 PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT 180
           PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT
Sbjct: 121 PPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRT 180

Query: 181 TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS
Sbjct: 181 TAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 230

[Close]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL
Match: A0A6J1BWN1 (uncharacterized protein LOC111006194 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006194 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.3e-125
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60
           MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS
Sbjct: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVVSHHKTPS 60

Query: 61  --GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV 120
             GSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV
Sbjct: 61  GLGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTV 120

Query: 121 KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG 180
           KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG
Sbjct: 121 KSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSG 180

Query: 181 RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS
Sbjct: 181 RTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 232

[Close]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL
Match: A0A0A0LT18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MGSCASLYGRS--AVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVV-SHHK 60
           MG+CASLY RS  + VK P PP+T TD+FEIPPSPIKHFKLQ NT+SAIKDISV+ +HHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRAS-----GGD 120
           TPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPSCG+TPLHHRFPAETPR S       D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120

Query: 121 DQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAA 180
           ++      PPLP KRRKKL +LFRESLG +ASFAFLN EE       N K DEP VSG  
Sbjct: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEE-------NRKADEPRVSGTD 180

Query: 181 SVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           SVC+S RT      +L DE  I   SK+CCLP L SR SS ERKEDLK     +NGVS
Sbjct: 181 SVCNSERTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLK----LINGVS 227

[Close]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL
Match: A0A1S3B2S0 (uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.0e-75
Identity = 160/238 (67.23%), Postives = 178/238 (74.79%), Query Frame = 0


Query: 1   MGSCASLYGRS--AVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVV-SHHK 60
           MG+CASLY RS  + VK P PPET+TD+FEIPPSPIKHFKLQ NT+SAIKDISV+ +HHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPR-----ASGGD 120
           TPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPSCG+TPLHHRFPAETPR     AS  D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTD 120

Query: 121 DQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAA 180
           ++L     PPLP KRRKKL +LFRESLG + SFAFLN EE       N K DE  VSG  
Sbjct: 121 NELSNFSLPPLPPKRRKKLADLFRESLGNEGSFAFLNDEE-------NRKADEARVSGTD 180

Query: 181 SVCSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
           SVC+S RT      +L DE  +   SK+CCLPALVSR    ERKEDLK     +NGVS
Sbjct: 181 SVCNSERTAGEGMDQLVDENPMELNSKMCCLPALVSR----ERKEDLK----LINGVS 223

[Close]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL
Match: A0A6J1JW82 (uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.8e-70
Identity = 154/236 (65.25%), Postives = 170/236 (72.03%), Query Frame = 0


Query: 1   MGSCASLYGR---SAVVKAPPPPETVTDKFEIPPSPIKHFKLQTNTESAIKDISVV-SHH 60
           MGSCASL      SAV   P P ETVTDKFEIPPSPIKH+KLQ N +S  KDISVV  HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCDDFFSVKGDFTPSCGSTPLHHRFPAETPRAS--GGDDQ 120
           KTPSGSKEEAFFDSRAWLDSDC+DFFSVKGDFTPS  +TP+HHRFPA TPRAS  G DD+
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQAGADDK 120

Query: 121 LPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASV 180
             T  S PLP KRRKKL +LFRESLG +ASFAFLN  +       N K DEPC+ G  SV
Sbjct: 121 PSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHND-------NRKTDEPCLPGTGSV 180

Query: 181 CSSGRTTAGAGTELGDEKAIGFGSKLCCLPALVSRHSSSERKEDLKASAMAVNGVS 231
            +S RT    G  + D+  IGF SK CCLP LVSR+ S ER+E+LK     VNGVS
Sbjct: 181 RNSERT---VGNGVDDKNMIGFESKFCCLPPLVSRNGSREREEELK----VVNGVS 222

[Close]

BLAST of Moc04g38960.1 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16
Identity = 73/229 (31.88%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 1   MGSCASLYGRSAVVKAPPPPETVTDKFEIPPSPIKHFKLQTN---TESAIKDISVVSHHK 60
           MGSC S    S+  K+    ++V         P     L+T+   T S I     +   +
Sbjct: 1   MGSCVS----SSQSKSSSASDSVVKLASFISKPDSTPPLKTDVMITSSTINGNPPIDSGR 60

Query: 61  TPSGSKEE-AFFDSRAWLDSDC-DDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQL 120
             SG+KE+  FFDSR WLDSDC DDF SV G+FTPS G+TP+HH+F  +TP   G +++ 
Sbjct: 61  WDSGNKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPH-QGEENKH 120

Query: 121 PTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVC 180
              +    P   +K+L+ELF+E+          + E+   ED         C+     V 
Sbjct: 121 GEEEEEASPTDNKKRLLELFKET---------QDEEDEEEEDYVAEGKARACLWIRTPVR 180

Query: 181 SSGRTTAGAGTELGDEKAIGFGSKLC--CLPALVSRHSSSERKEDLKAS 223
           SS   T     +   +K     S     C+P LVS  S ++R+ ++  S
Sbjct: 181 SSAPATPYNNNKERQQKFKRVRSAALGRCVPRLVSCSSFTDRRRNMMTS 215

[Close]

BLAST of Moc04g38960.1 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 67  FFDSRAWLDSDC-DDFFSVKGDFTPSCGSTPLHHRFPAETPRASGGDDQLPTVKSPPLPA 126
           FFDSR WLDSDC DDF SV G+FTPS G+TP+HH+F  +TP   G +++    +    P 
Sbjct: 3   FFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPH-QGEENKHGEEEEEASPT 62

Query: 127 KRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVDEPCVSGAASVCSSGRTTAGAG 186
             +K+L+ELF+E+          + E+   ED         C+     V SS   T    
Sbjct: 63  DNKKRLLELFKET---------QDEEDEEEEDYVAEGKARACLWIRTPVRSSAPATPYNN 122

Query: 187 TELGDEKAIGFGSKLC--CLPALVSRHSSSERKEDLKAS 223
            +   +K     S     C+P LVS  S ++R+ ++  S
Sbjct: 123 NKERQQKFKRVRSAALGRCVPRLVSCSSFTDRRRNMMTS 151

[Close]

BLAST of Moc04g38960.1 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-12
Identity = 56/147 (38.10%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 32  SPIKHFKLQTNTE-SAIKDISVVSHHKTPSGSKEEAFFDSRAWLDSDC-DDFFSVKGDFT 91
           SP K   +  N   + +K     S  K   GSK+E FFDS+ WL SD  DDF SV GDFT
Sbjct: 49  SPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFT 108

Query: 92  PSCGSTPLHHRFPAETPRASG---GDDQLPTVKSPPLPAKRRKKLVELFRESLGGDASFA 151
           PS G+TP    F    PR       + +     S P P  RRKKL ELFR+S+       
Sbjct: 109 PSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSI------- 168

Query: 152 FLNSEENPPEDLTNGKVDEPCVSGAAS 174
                E   E  ++  +  P +SGA S
Sbjct: 169 ----REEREESGSSSAISTPYLSGANS 183

[Close]

BLAST of Moc04g38960.1 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 51  SVVSHHKTPSGSKEEAFFDSRAWLDSDC-DDFFSVKGDFTPSCGSTP---LHHRFP-AET 110
           S  S  ++   SK+E +FDS  W  SD  DDF+SV+GDFTPS G+TP   +  + P   +
Sbjct: 78  SFSSSKRSFGSSKDETYFDSHQWQQSDSEDDFYSVRGDFTPSVGNTPRCSISEKLPRIHS 137

Query: 111 PRASGGDDQLPTVKSPPLPAKRRKKLVELFRESLGGDASFAFLNSEENPPEDLTNGKVD 165
           P   G   + P V     PA RRKKL ELFR+S+  + +     S E   E       D
Sbjct: 138 PLFEG---EKPRVSFSHSPAPRRKKLGELFRDSIREERAVILEESSEYQSEKSKKSSCD 193

The following BLAST results are available for this feature:

BLAST of Moc04g38960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133665.1	1.5e-126	100.00	uncharacterized protein At3g27210 isoform X2 [Momordica charantia]	[more]
XP_022133664.1	4.8e-125	99.14	uncharacterized protein LOC111006194 isoform X1 [Momordica charantia]	[more]
XP_038884376.1	1.5e-81	71.49	uncharacterized protein At3g27210-like [Benincasa hispida]	[more]
XP_004138611.1	2.9e-77	67.23	uncharacterized protein LOC101209518 [Cucumis sativus] >KGN63176.1 hypothetical ...	[more]
XP_008441350.1	2.1e-75	67.23	PREDICTED: uncharacterized protein LOC103485490 [Cucumis melo]	[more]

BLAST of Moc04g38960.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK32	2.9e-11	38.10	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV...	[more]

BLAST of Moc04g38960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVV8	7.3e-127	100.00	uncharacterized protein At3g27210 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1BWN1	2.3e-125	99.14	uncharacterized protein LOC111006194 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LT18	1.4e-77	67.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1	[more]
A0A1S3B2S0	1.0e-75	67.23	uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=...	[more]
A0A6J1JW82	4.8e-70	65.25	uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914...	[more]

BLAST of Moc04g38960.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01860.1	5.2e-16	31.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G01860.2	2.2e-14	34.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G27210.1	2.0e-12	38.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G40860.1	1.3e-11	38.66	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR34280:SF13	SUBFAMILY NOT NAMED	coord: 1..223
IPR038947	At3g27210-like	PANTHER	PTHR34280	OS01G0920100 PROTEIN	coord: 1..223

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc04g38960	Moc04g38960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc04g38960.1.exon1	Moc04g38960.1.exon1	exon
Moc04g38960.1.exon2	Moc04g38960.1.exon2	exon
Moc04g38960.1.exon3	Moc04g38960.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc04g38960.1	cds.Moc04g38960.1	CDS
cds.Moc04g38960.1	cds.Moc04g38960.1_2	CDS
cds.Moc04g38960.1	cds.Moc04g38960.1_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc04g38960.1	Moc04g38960.1-protein	polypeptide