MS028244 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCAGAAAACCCGCCGCTCTGAAGCACATTCTGAAGCGCTGCTCCAGCCTCGGCCGGAAGCAGGAGGCGCCGTACGACGACGTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTACCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAATGA ATGGCCATCAGAAAACCCGCCGCTCTGAAGCACATTCTGAAGCGCTGCTCCAGCCTCGGCCGGAAGCAGGAGGCGCCGTACGACGACGTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTACCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAATGA ATGGCCATCAGAAAACCCGCCGCTCTGAAGCACATTCTGAAGCGCTGCTCCAGCCTCGGCCGGAAGCAGGAGGCGCCGTACGACGACGTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTACCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAATGA MAIRKPAALKHILKRCSSLGRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK Homology
BLAST of MS028244 vs. NCBI nr
Match: KAG7011743.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41 Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. NCBI nr
Match: XP_022952665.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata]) HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41 Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. NCBI nr
Match: KAG6572079.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41 Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. NCBI nr
Match: XP_022969389.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]) HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40 Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. NCBI nr
Match: KAG6588978.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40 Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of MS028244 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 5.0e-31 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of MS028244 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 9.2e-25 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of MS028244 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of MS028244 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.9e-15 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of MS028244 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 6.6e-15 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of MS028244 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.3e-41 Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 7.3e-41 Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of MS028244 vs. ExPASy TrEMBL
Match: A0A6J1EKI0 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111435304 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40 Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of MS028244 vs. ExPASy TrEMBL
Match: A0A6J1JNJ6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.8e-40 Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0
BLAST of MS028244 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38 Identity = 82/99 (82.83%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of MS028244 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 134.8 bits (338), Expect = 3.6e-32 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of MS028244 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 129.8 bits (325), Expect = 1.2e-30 Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of MS028244 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 129.0 bits (323), Expect = 2.0e-30 Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of MS028244 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29 Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of MS028244 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 123.6 bits (309), Expect = 8.2e-29 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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