MS022725 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTCTATGGGATCGCAGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGATCAATTCGATAGAAAAGAAGGAATAGTGTGTATTTTTCGTTGGGGGTTTCCTATAAAAAATTGTCGAATCTTCCTCCGATTCCTTATGAAAGACATTCAGTCCATTAGAATAGAAGTTAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCATTCCCTTGACTCGTACCGATCAGAATCTGACGCCACGAGAAATTGAGCAAAAGGCTGCCGAATTGGCCTATTTCTTGCGTGTACCAATTGAAAGTTTTTTGAAAAATGAAGTT ATGTCTTTCTATGGGATCGCAGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGATCAATTCGATAGAAAAGAAGGAATAGTGTGTATTTTTCGTTGGGGGTTTCCTATAAAAAATTGTCGAATCTTCCTCCGATTCCTTATGAAAGACATTCAGTCCATTAGAATAGAAGTTAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCATTCCCTTGACTCGTACCGATCAGAATCTGACGCCACGAGAAATTGAGCAAAAGGCTGCCGAATTGGCCTATTTCTTGCGTGTACCAATTGAAAGTTTTTTGAAAAATGAAGTT ATGTCTTTCTATGGGATCGCAGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGATCAATTCGATAGAAAAGAAGGAATAGTGTGTATTTTTCGTTGGGGGTTTCCTATAAAAAATTGTCGAATCTTCCTCCGATTCCTTATGAAAGACATTCAGTCCATTAGAATAGAAGTTAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCATTCCCTTGACTCGTACCGATCAGAATCTGACGCCACGAGAAATTGAGCAAAAGGCTGCCGAATTGGCCTATTTCTTGCGTGTACCAATTGAAAGTTTTTTGAAAAATGAAGTT MSFYGIAGLFISSYLWCTILWNVGSGYDQFDRKEGIVCIFRWGFPIKNCRIFLRFLMKDIQSIRIEVKEGIYARRVLYMEIRGQGAIPLTRTDQNLTPREIEQKAAELAYFLRVPIESFLKNEV Homology
BLAST of MS022725 vs. NCBI nr
Match: YP_009752592.1 (photosystem I assembly protein Ycf4 [Trichosanthes homophylla] >QIT05073.1 photosystem I assembly protein Ycf4 [Trichosanthes kirilowii] >QJD26482.1 Ycf4 [Trichosanthes kirilowii var. japonica] >QJD26656.1 Ycf4 [Trichosanthes rosthornii] >QIT04988.1 photosystem I assembly protein Ycf4 [Trichosanthes homophylla] >QJD26307.1 Ycf4 [Trichosanthes kirilowii]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. NCBI nr
Match: YP_009751749.1 (photosystem I assembly protein Ycf4 [Herpetospermum pedunculosum] >QIT04482.1 photosystem I assembly protein Ycf4 [Herpetospermum pedunculosum]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. NCBI nr
Match: YP_009752170.1 (photosystem I assembly protein Ycf4 [Linnaeosicyos amara] >QIT05580.1 photosystem I assembly protein Ycf4 [Linnaeosicyos amara]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. NCBI nr
Match: YP_009456072.1 (photosystem I assembly protein Ycf4 [Momordica charantia] >YP_009674402.1 photosystem I assembly protein Ycf4 [Siraitia grosvenorii] >YP_009738212.1 photosystem I assembly protein Ycf4 [Siraitia siamensis] >YP_009751917.1 photosystem I assembly protein Ycf4 [Cyclanthera pedata] >YP_009752254.1 photosystem I assembly protein Ycf4 [Trichosanthes baviensis] >YP_009753185.1 photosystem I assembly protein Ycf4 [Trichosanthes truncata] >YP_009753269.1 photosystem I assembly protein Ycf4 [Nothoalsomitra suberosa] >YP_009753800.1 photosystem I assembly protein Ycf4 [Trichosanthes pilosa] >YP_009753885.1 photosystem I assembly protein Ycf4 [Trichosanthes lobata] >QIT04061.1 photosystem I assembly protein Ycf4 [Luffa aegyptiaca] >AUJ21839.1 photosystem I assembly protein Ycf4 [Momordica charantia] >QDK59400.1 photosystem I assembly protein Ycf4 [Siraitia grosvenorii] >QIB71516.1 photosystem I assembly protein Ycf4 [Siraitia grosvenorii] >QIB71604.1 photosystem I assembly protein Ycf4 [Siraitia siamensis]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. NCBI nr
Match: QKX48484.1 (photosystem I assembly protein Ycf4 [Luffa acutangula]) HSP 1 Score: 235.0 bits (598), Expect = 3.6e-58 Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. ExPASy Swiss-Prot
Match: A0ZZ46 (Photosystem I assembly protein Ycf4 OS=Gossypium barbadense OX=3634 GN=ycf4 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.8e-60 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of MS022725 vs. ExPASy Swiss-Prot
Match: Q2L913 (Photosystem I assembly protein Ycf4 OS=Gossypium hirsutum OX=3635 GN=ycf4 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.8e-60 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of MS022725 vs. ExPASy Swiss-Prot
Match: Q2QD78 (Photosystem I assembly protein Ycf4 OS=Cucumis sativus OX=3659 GN=ycf4 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.6e-59 Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of MS022725 vs. ExPASy Swiss-Prot
Match: Q09G35 (Photosystem I assembly protein Ycf4 OS=Platanus occidentalis OX=4403 GN=ycf4 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 4.4e-59 Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of MS022725 vs. ExPASy Swiss-Prot
Match: Q2MIH6 (Photosystem I assembly protein Ycf4 OS=Solanum bulbocastanum OX=147425 GN=ycf4 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 4.4e-59 Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of MS022725 vs. ExPASy TrEMBL
Match: A0A6H0ESZ3 (Photosystem I assembly protein Ycf4 OS=Trichosanthes kirilowii OX=3677 GN=ycf4 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. ExPASy TrEMBL
Match: A0A6M3RTZ8 (Photosystem I assembly protein Ycf4 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf4 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. ExPASy TrEMBL
Match: A0A6H0EP62 (Photosystem I assembly protein Ycf4 OS=Luffa aegyptiaca OX=3670 GN=ycf4 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. ExPASy TrEMBL
Match: A0A514YKU3 (Photosystem I assembly protein Ycf4 OS=Siraitia grosvenorii OX=190515 GN=ycf4 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. ExPASy TrEMBL
Match: A0A6H0EPD9 (Photosystem I assembly protein Ycf4 OS=Trichosanthes baviensis OX=1054457 GN=ycf4 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS022725 vs. TAIR 10
Match: ATCG00520.1 (unfolded protein binding ) HSP 1 Score: 213.0 bits (541), Expect = 1.4e-55 Identity = 105/119 (88.24%), Postives = 108/119 (90.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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