MS014554 (gene) Bitter gourd (TR) v1

Overview


Name	MS014554
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold553: 826919 .. 827071 (+)
RNA-Seq Expression	MS014554
Synteny	MS014554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTGGTCAAGAAGTCTCAAAGATGTTATCCATTGAGATAATGGTAGAATATAAAATTTGGGTGGAATCTGAAACCTTCAATATATTAGTCAATTCTGTCGAGATGTTCAACCCTCTAAACAAGAGAGTCCTAATTTCTCTAAGGGTGCCC

mRNA sequence

AAATCTGGTCAAGAAGTCTCAAAGATGTTATCCATTGAGATAATGGTAGAATATAAAATTTGGGTGGAATCTGAAACCTTCAATATATTAGTCAATTCTGTCGAGATGTTCAACCCTCTAAACAAGAGAGTCCTAATTTCTCTAAGGGTGCCC

Coding sequence (CDS)

AAATCTGGTCAAGAAGTCTCAAAGATGTTATCCATTGAGATAATGGTAGAATATAAAATTTGGGTGGAATCTGAAACCTTCAATATATTAGTCAATTCTGTCGAGATGTTCAACCCTCTAAACAAGAGAGTCCTAATTTCTCTAAGGGTGCCC

Protein sequence

KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP

Homology

[Close]

BLAST of MS014554 vs. NCBI nr
Match: XP_038879512.1 (uncharacterized protein LOC120071354 isoform X4 [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ ++ MVE KIWVES T NILVNSVEM NPLN+RVLI LR+P
Sbjct: 100 KYGQEVAKMIFMKTMVECKIWVESATINILVNSVEMVNPLNQRVLIFLRMP 150

[Close]

BLAST of MS014554 vs. NCBI nr
Match: XP_038879509.1 (uncharacterized protein LOC120071354 isoform X1 [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ ++ MVE KIWVES T NILVNSVEM NPLN+RVLI LR+P
Sbjct: 514 KYGQEVAKMIFMKTMVECKIWVESATINILVNSVEMVNPLNQRVLIFLRMP 564

[Close]

BLAST of MS014554 vs. NCBI nr
Match: XP_038879511.1 (uncharacterized protein LOC120071354 isoform X3 [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ ++ MVE KIWVES T NILVNSVEM NPLN+RVLI LR+P
Sbjct: 514 KYGQEVAKMIFMKTMVECKIWVESATINILVNSVEMVNPLNQRVLIFLRMP 564

[Close]

BLAST of MS014554 vs. NCBI nr
Match: XP_038879510.1 (uncharacterized protein LOC120071354 isoform X2 [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ ++ MVE KIWVES T NILVNSVEM NPLN+RVLI LR+P
Sbjct: 358 KYGQEVAKMIFMKTMVECKIWVESATINILVNSVEMVNPLNQRVLIFLRMP 408

[Close]

BLAST of MS014554 vs. NCBI nr
Match: XP_031736165.1 (uncharacterized protein LOC101204937 isoform X4 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 4.8e-09
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQE++KM+ I+ MVE KIWVES T NI+VNS+EM NPLN+RVLI L++P
Sbjct: 217 KYGQEIAKMIFIKTMVECKIWVESATINIVVNSIEMLNPLNQRVLIFLKMP 267

[Close]

BLAST of MS014554 vs. ExPASy TrEMBL
Match: A0A0A0M027 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652810 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-09
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQE++KM+ I+ MVE KIWVES T NI+VNS+EM NPLN+RVLI L++P
Sbjct: 168 KYGQEIAKMIFIKTMVECKIWVESATINIVVNSIEMLNPLNQRVLIFLKMP 218

[Close]

BLAST of MS014554 vs. ExPASy TrEMBL
Match: A0A1S3B8J3 (putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-09
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQE++KM+ I+ MVE KIWVES T NI+VNS+EM NPLN+RVLI L++P
Sbjct: 512 KYGQEIAKMIFIKTMVECKIWVESATINIVVNSIEMLNPLNQRVLIFLKMP 562

[Close]

BLAST of MS014554 vs. ExPASy TrEMBL
Match: A0A1S4DUY4 (uncharacterized protein LOC103487212 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-09
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQE++KM+ I+ MVE KIWVES T NI+VNS+EM NPLN+RVLI L++P
Sbjct: 331 KYGQEIAKMIFIKTMVECKIWVESATINIVVNSIEMLNPLNQRVLIFLKMP 381

[Close]

BLAST of MS014554 vs. ExPASy TrEMBL
Match: A0A6J1JM44 (uncharacterized protein LOC111485823 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485823 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ I+ MVE  IWVES T N+LVNS+EM NPLN+RVLI LR+P
Sbjct: 115 KYGQEVAKMIFIKTMVECNIWVESATINLLVNSIEMVNPLNQRVLIFLRMP 165

[Close]

BLAST of MS014554 vs. ExPASy TrEMBL
Match: A0A6J1JMV4 (uncharacterized protein LOC111485823 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485823 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1   KSGQEVSKMLSIEIMVEYKIWVESETFNILVNSVEMFNPLNKRVLISLRVP 52
           K GQEV+KM+ I+ MVE  IWVES T N+LVNS+EM NPLN+RVLI LR+P
Sbjct: 514 KYGQEVAKMIFIKTMVECNIWVESATINLLVNSIEMVNPLNQRVLIFLRMP 564

The following BLAST results are available for this feature:

BLAST of MS014554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879512.1	1.7e-09	72.55	uncharacterized protein LOC120071354 isoform X4 [Benincasa hispida]	[more]
XP_038879509.1	1.7e-09	72.55	uncharacterized protein LOC120071354 isoform X1 [Benincasa hispida]	[more]
XP_038879511.1	1.7e-09	72.55	uncharacterized protein LOC120071354 isoform X3 [Benincasa hispida]	[more]
XP_038879510.1	1.7e-09	72.55	uncharacterized protein LOC120071354 isoform X2 [Benincasa hispida]	[more]
XP_031736165.1	4.8e-09	66.67	uncharacterized protein LOC101204937 isoform X4 [Cucumis sativus]	[more]

BLAST of MS014554 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS014554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M027	2.3e-09	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652810 PE=4 SV=1	[more]
A0A1S3B8J3	2.3e-09	66.67	putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis m...	[more]
A0A1S4DUY4	2.3e-09	66.67	uncharacterized protein LOC103487212 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JM44	3.1e-09	68.63	uncharacterized protein LOC111485823 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JMV4	3.1e-09	68.63	uncharacterized protein LOC111485823 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS014554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014554.1	MS014554.1	mRNA