MS010367 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR Homology
BLAST of MS010367 vs. NCBI nr
Match: XP_022151484.1 (zinc finger protein 8-like [Momordica charantia]) HSP 1 Score: 301.6 bits (771), Expect = 3.7e-78 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MS010367 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida]) HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46 Identity = 111/153 (72.55%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of MS010367 vs. NCBI nr
Match: XP_008439363.1 (PREDICTED: zinc finger protein 7 [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 5.0e-43 Identity = 107/157 (68.15%), Postives = 117/157 (74.52%), Query Frame = 0
BLAST of MS010367 vs. NCBI nr
Match: KAE8650335.1 (hypothetical protein Csa_010297 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 8.5e-43 Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of MS010367 vs. NCBI nr
Match: XP_004134420.3 (zinc finger protein 10 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 8.5e-43 Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-10 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.1e-08 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.4e-08 Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0
BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.2e-08 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.4e-43 Identity = 107/157 (68.15%), Postives = 117/157 (74.52%), Query Frame = 0
BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A0A0L4H6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.1e-43 Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1IWL0 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.7e-42 Identity = 106/157 (67.52%), Postives = 118/157 (75.16%), Query Frame = 0
BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1E9V2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111432102 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40 Identity = 103/154 (66.88%), Postives = 117/154 (75.97%), Query Frame = 0
BLAST of MS010367 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of MS010367 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of MS010367 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS010367 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09 Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of MS010367 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.9e-09 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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