MS010367 (gene) Bitter gourd (TR) v1

Overview


Name	MS010367
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	C2H2-type domain-containing protein
Location	scaffold878: 467418 .. 467852 (+)
RNA-Seq Expression	MS010367
Synteny	MS010367

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG

mRNA sequence

ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG

Coding sequence (CDS)

ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTGCACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCTCTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTCGACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG

Protein sequence

MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR

Homology

[Close]

BLAST of MS010367 vs. NCBI nr
Match: XP_022151484.1 (zinc finger protein 8-like [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 3.7e-78
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60
           MDFGKQGSWDSSSDEY PQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MDFGKQGSWDSSSDEYXPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI 120
           RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI
Sbjct: 61  RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI 120

Query: 121 HRHRSQGANEDLLGANLTLQIDQTR 146
           HRHRSQGANEDLLGANLTLQIDQTR
Sbjct: 121 HRHRSQGANEDLLGANLTLQIDQTR 145

[Close]

BLAST of MS010367 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46
Identity = 111/153 (72.55%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQD--QVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYEPQD   +  D+T+ DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHHLKDDDTENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKQRNLIPSSS---SHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTA 120
           RKDRAKAK RN I SSS   SHS+DQ FPPI   P  SYYPPPP      +YRMYFD TA
Sbjct: 61  RKDRAKAKHRNFIHSSSSSHSHSNDQFFPPIPTQPTPSYYPPPP------SYRMYFD-TA 120

Query: 121 AANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR 146
           AAN+PIH + RS    N+ LLGANL+LQIDQ R
Sbjct: 121 AANFPIHPQIRSPTVVNQQLLGANLSLQIDQNR 146

[Close]

BLAST of MS010367 vs. NCBI nr
Match: XP_008439363.1 (PREDICTED: zinc finger protein 7 [Cucumis melo])

HSP 1 Score: 184.9 bits (468), Expect = 5.0e-43
Identity = 107/157 (68.15%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MDFGKQGSWDSSSDEYEPQD        D  +DPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPAASYYPPPPNYHNNYNYRMYF 120
           HRKDRAKAK RN I SSSS HS HDQ FPPI P     P+  ++PPPP      +YRMYF
Sbjct: 61  HRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPP------SYRMYF 120

Query: 121 DTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR 146
           D TAA N+PIH   +  A  N++LLGANL+LQIDQ R
Sbjct: 121 D-TAATNFPIHPQITSPAVVNQELLGANLSLQIDQNR 150

[Close]

BLAST of MS010367 vs. NCBI nr
Match: KAE8650335.1 (hypothetical protein Csa_010297 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 8.5e-43
Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 90  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 149

Query: 61  RKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASYY--PPPPNYHNNYNYRMYFD 120
           RKDRAKAK RN I SSSS HS HDQ FPPI P      SYY  PPPP      +YRMYFD
Sbjct: 150 RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPP------SYRMYFD 209

Query: 121 TTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR 146
            TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Sbjct: 210 -TAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR 238

[Close]

BLAST of MS010367 vs. NCBI nr
Match: XP_004134420.3 (zinc finger protein 10 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 8.5e-43
Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASYY--PPPPNYHNNYNYRMYFD 120
           RKDRAKAK RN I SSSS HS HDQ FPPI P      SYY  PPPP      +YRMYFD
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPP------SYRMYFD 120

Query: 121 TTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR 146
            TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Sbjct: 121 -TAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR 149

[Close]

BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-10
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 33  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP 85
           R Y C+FC R F +AQALGGHMN+HR+DRA+ KQ++L PSS+    DQ  PP
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSST----DQATPP 100

[Close]

BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.1e-08
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 33  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAAS 92
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+ S      P  P+P  S
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPS------PPYPNPNYS 104

Query: 93  Y----YPPPPNY 101
           Y      PPP++
Sbjct: 105 YSTMANSPPPHH 110

[Close]

BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-08
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 33  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAAS 92
           R Y C+FC+R F +AQALGGHMN+HR+DRA+ KQ +            +FP  S  P   
Sbjct: 37  RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQAD---------DQYLFPKSSSSPEYP 96

Query: 93  YYPPPPNYHNNYNYRMYFDT 113
            +    N H    Y + F+T
Sbjct: 97  SHKDSDNIHETSCYTLVFNT 107

[Close]

BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-08
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 10 DSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQR 68
          D  SD          D++ + + R Y C+FC RGF+NAQALGGHMNIHR+DRAK +Q+
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQS-RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of MS010367 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 35 YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHP 90
          Y C+FC+R F +AQALGGHMN+HR+DRAK +Q   IPS     H    P  +P+P
Sbjct: 49 YTCSFCRREFRSAQALGGHMNVHRRDRAKLRQ---IPSWLFEPHHHT-PIANPNP 99

[Close]

BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60
           MDFGKQGSWDSSSDEY PQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MDFGKQGSWDSSSDEYXPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI 120
           RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI
Sbjct: 61  RAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTAAANYPI 120

Query: 121 HRHRSQGANEDLLGANLTLQIDQTR 146
           HRHRSQGANEDLLGANLTLQIDQTR
Sbjct: 121 HRHRSQGANEDLLGANLTLQIDQTR 145

[Close]

BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.4e-43
Identity = 107/157 (68.15%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MDFGKQGSWDSSSDEYEPQD        D  +DPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPAASYYPPPPNYHNNYNYRMYF 120
           HRKDRAKAK RN I SSSS HS HDQ FPPI P     P+  ++PPPP      +YRMYF
Sbjct: 61  HRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPP------SYRMYF 120

Query: 121 DTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR 146
           D TAA N+PIH   +  A  N++LLGANL+LQIDQ R
Sbjct: 121 D-TAATNFPIHPQITSPAVVNQELLGANLSLQIDQNR 150

[Close]

BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A0A0L4H6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.1e-43
Identity = 109/156 (69.87%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASYY--PPPPNYHNNYNYRMYFD 120
           RKDRAKAK RN I SSSS HS HDQ FPPI P      SYY  PPPP      +YRMYFD
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPP------SYRMYFD 120

Query: 121 TTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR 146
            TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Sbjct: 121 -TAATNFPIHPQITSPAVVNQELLGANLSLEIDQTR 149

[Close]

BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1IWL0 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.7e-42
Identity = 106/157 (67.52%), Postives = 118/157 (75.16%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEP-------QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGG 60
           MDFGKQGS DSSSDEY+P       +   PK  TD DPTKRPYECTFCKRGFTNAQALGG
Sbjct: 1   MDFGKQGSSDSSSDEYDPPPPQQHHRHHHPKHHTDNDPTKRPYECTFCKRGFTNAQALGG 60

Query: 61  HMNIHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYF 120
           HMNIHRKDRAK K RN   SSSS  HS+DQ+FPP+S  P   YYPPPP    + +YRMYF
Sbjct: 61  HMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNIPYYPPPP--QPSSSYRMYF 120

Query: 121 DTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR 146
           D TAA N+PIH + RS G  N++L GANL+LQIDQTR
Sbjct: 121 D-TAATNFPIHPQIRSPGVVNQELPGANLSLQIDQTR 154

[Close]

BLAST of MS010367 vs. ExPASy TrEMBL
Match: A0A6J1E9V2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111432102 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 103/154 (66.88%), Postives = 117/154 (75.97%), Query Frame = 0


Query: 1   MDFGKQGSWDSSSDEYEP----QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMN 60
           MDFGKQG+ DSSSDEY+P    Q       TD DPTKRPYECTFCKRGFTNAQALGGHMN
Sbjct: 1   MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTT 120
           IHRKDRAK K RN   SSSS  HS+DQ+FPP+S  P   YYPPPP   +  +YRMYFD T
Sbjct: 61  IHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPYYPPPPQPPS--SYRMYFD-T 120

Query: 121 AAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR 146
           +A N+PIH + RS G  N++LLGA+L+LQIDQTR
Sbjct: 121 SATNFPIHPQIRSPGVGNQELLGADLSLQIDQTR 151

[Close]

BLAST of MS010367 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 33 RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNL 70
          RPY C FC+RGF+NAQALGGHMNIHRKDRAK +Q NL
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANL 55

[Close]

BLAST of MS010367 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 31 TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKQRNLIPSSSSHSH 79
          T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK +N    + S +H
Sbjct: 31 TRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTH 79

[Close]

BLAST of MS010367 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 33  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP 85
           R Y C+FC R F +AQALGGHMN+HR+DRA+ KQ++L PSS+    DQ  PP
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSST----DQATPP 100

[Close]

BLAST of MS010367 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 21  QVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQ 80
           Q+         +R Y+C  CKRGFTN QALGGH NIHR++R +       PSSSS SH  
Sbjct: 7   QIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERER------YPSSSSSSHSF 66

Query: 81  IF----PPISPHPAASYYPPPPNYHNNYNY 107
            F    P  SP  + ++  PPP +    +Y
Sbjct: 67  PFSLPLPSQSPSSSTNFTNPPPYFPTIESY 90

[Close]

BLAST of MS010367 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-09
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 33  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAAS 92
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+ S      P  P+P  S
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPS------PPYPNPNYS 104

Query: 93  Y----YPPPPNY 101
           Y      PPP++
Sbjct: 105 YSTMANSPPPHH 110

The following BLAST results are available for this feature:

BLAST of MS010367 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151484.1	3.7e-78	99.31	zinc finger protein 8-like [Momordica charantia]	[more]
XP_038877191.1	2.8e-46	72.55	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_008439363.1	5.0e-43	68.15	PREDICTED: zinc finger protein 7 [Cucumis melo]	[more]
KAE8650335.1	8.5e-43	69.87	hypothetical protein Csa_010297 [Cucumis sativus]	[more]
XP_004134420.3	8.5e-43	69.87	zinc finger protein 10 [Cucumis sativus]	[more]

BLAST of MS010367 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS9	3.4e-10	59.62	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q38895	4.1e-08	47.22	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	5.4e-08	40.00	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SR34	9.2e-08	51.72	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q9SLB8	4.6e-07	52.73	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]

BLAST of MS010367 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD81	1.8e-78	99.31	zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 S...	[more]
A0A1S3AZA2	2.4e-43	68.15	zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1	[more]
A0A0A0L4H6	4.1e-43	69.87	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 P...	[more]
A0A6J1IWL0	2.7e-42	67.52	zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=...	[more]
A0A6J1E9V2	1.5e-40	66.88	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of MS010367 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53820.1	2.2e-12	81.08	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G43540.1	2.2e-12	69.39	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	2.4e-11	59.62	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	1.0e-09	41.11	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	2.9e-09	47.22	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 35..57 e-value: 0.0097 score: 25.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 37..57
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 35..62 score: 11.468431
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 35..59 e-value: 2.0E-5 score: 24.5
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 10..82 e-value: 1.4E-9 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 10..132
None	No IPR available	PANTHER	PTHR45801:SF43	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 10..132
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 32..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010367.1	MS010367.1	mRNA