Homology
BLAST of MS004572 vs. NCBI nr
Match:
XP_022134048.1 (replication factor C subunit 4 [Momordica charantia])
HSP 1 Score: 652.5 bits (1682), Expect = 2.0e-183
Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVVNALFAACKSGNFDLANKEVNNV AEGYPV QMLSQIFEVVVEAN LQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 335
BLAST of MS004572 vs. NCBI nr
Match:
XP_038897028.1 (replication factor C subunit 4 [Benincasa hispida])
HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-176
Identity = 320/336 (95.24%), Postives = 328/336 (97.62%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL+SVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVSVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ALF+ACKSGNFD+ANKEVNNV+AEGYPV QMLSQIFEVVVE NDLQDEQKARIC
Sbjct: 241 PREVVDALFSACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVVEDNDLQDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL 336
BLAST of MS004572 vs. NCBI nr
Match:
XP_023523758.1 (replication factor C subunit 4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 625.2 bits (1611), Expect = 3.3e-175
Identity = 321/337 (95.25%), Postives = 329/337 (97.63%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE+VMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEKVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ LFAACKSGNFDLANKEVNNVIAEGYPV QMLSQIFEVV+EA+DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337
BLAST of MS004572 vs. NCBI nr
Match:
XP_022981026.1 (replication factor C subunit 4 [Cucurbita maxima])
HSP 1 Score: 624.4 bits (1609), Expect = 5.7e-175
Identity = 321/337 (95.25%), Postives = 327/337 (97.03%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ LFAACKSGNFDLANKEVNNVIAEGYPV QMLSQIFEVV+EA+DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337
BLAST of MS004572 vs. NCBI nr
Match:
KAG6608033.1 (Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174
Identity = 321/337 (95.25%), Postives = 327/337 (97.03%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ LFAACKSGNFDLANKEVNNVIAEGYPV QMLSQIFEVV+EA+DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337
BLAST of MS004572 vs. ExPASy Swiss-Prot
Match:
Q93ZX1 (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1)
HSP 1 Score: 558.9 bits (1439), Expect = 3.9e-158
Identity = 281/335 (83.88%), Postives = 307/335 (91.64%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS RQ GYPCP FKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEA-NDLQDEQKARI 300
P EVVN LF ACKSG+FD+ANKEV+N++AEGYP +Q+++Q+F++V EA +D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
CK LAE DK LVDGADEYLQLLDV S T+ A M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335
BLAST of MS004572 vs. ExPASy Swiss-Prot
Match:
Q9FXM3 (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)
HSP 1 Score: 555.8 bits (1431), Expect = 3.3e-157
Identity = 279/334 (83.53%), Postives = 307/334 (91.92%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL SSQPWVEKYRP+QVKDVAHQ+EVVRVLT TL+T+ PHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIA+QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS R+GGYPCPP+KIII
Sbjct: 61 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RKGGYPCPPYKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLD +AL+TLS+IS GDLRRAITYLQSAARLFGSSISS DLISVSG I
Sbjct: 181 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
P +VV +L A+CKSG FD+ANKEVNN+IA+GYPV+Q++SQ +V+V A+D+ DEQKARIC
Sbjct: 241 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
KKL EADKCLVDGADEYLQLLDV S+T++A M
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333
BLAST of MS004572 vs. ExPASy Swiss-Prot
Match:
P35249 (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)
HSP 1 Score: 372.9 bits (956), Expect = 3.9e-102
Identity = 189/321 (58.88%), Postives = 245/321 (76.32%), Query Frame = 0
Query: 10 PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
PWVEKYRPK V +VA Q+EVV VL +LE + P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39 PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98
Query: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
EL++ RVLELNASD+RGI VVR K+K+FA + V SG R G PCPPFKI+ILDEADSMT
Sbjct: 99 ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158
Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
AQ ALRRTME SK TRF ICNY+SRIIEPL SRC+KFRFKPLS+++ +R+L I +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKK 218
Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLF-GSSISSKDLISVSGVIPREVVNAL 249
E + + E ++ L +S+GDLR+AIT+LQSA RL G I+ K + ++GVIP E ++ +
Sbjct: 219 ENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGV 278
Query: 250 FAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARICKKLAEADK 309
FAAC+SG+FD V ++I EG+ TQ+++Q+ +VVVE N+L D+QK+ I +KLAE DK
Sbjct: 279 FAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVE-NNLSDKQKSIITEKLAEVDK 338
Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
CL DGADE+LQL+ + + MQ
Sbjct: 339 CLADGADEHLQLISLCATVMQ 357
BLAST of MS004572 vs. ExPASy Swiss-Prot
Match:
Q99J62 (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)
HSP 1 Score: 371.7 bits (953), Expect = 8.7e-102
Identity = 186/321 (57.94%), Postives = 241/321 (75.08%), Query Frame = 0
Query: 10 PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
PWVEKYRPK V +VA QDEVV VL +LE + P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39 PWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98
Query: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
EL++ RVLELNASD+RGI VVR K+K+FA + V SG R G PCPPFKI+ILDEADSMT
Sbjct: 99 ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158
Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
AQ ALRRTME SK TRF ICNY+SRIIEPL SRC+KFRFKPLS+++ +R+L I +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEK 218
Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLIS-VSGVIPREVVNAL 249
E + + E ++ L IS+GDLR+AIT+LQSA RL G S+D+I+ ++GVIP ++ +
Sbjct: 219 ENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGI 278
Query: 250 FAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARICKKLAEADK 309
F AC SG+FD V N+I EG+ TQ+++Q+ + ++E +L D+ K+ I +KLAE DK
Sbjct: 279 FTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDK 338
Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
CL DGADE+LQL+ + + MQ
Sbjct: 339 CLADGADEHLQLMSLCATVMQ 358
BLAST of MS004572 vs. ExPASy Swiss-Prot
Match:
Q54MD4 (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)
HSP 1 Score: 341.3 bits (874), Expect = 1.3e-92
Identity = 168/324 (51.85%), Postives = 225/324 (69.44%), Query Frame = 0
Query: 6 QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQ 65
+ ++PWV KYRPK V DV++Q++V+ L +L T + PH+LFYGPPGTGKT+T LAIA
Sbjct: 7 KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMD 66
Query: 66 LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEAD 125
++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV P FK+IILDEAD
Sbjct: 67 IYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEAD 126
Query: 126 SMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILH 185
SMT DAQ ALRRT+ET SK TRF +CNYISRII+PLASRCAKFRFKPL +R+
Sbjct: 127 SMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKF 186
Query: 186 ICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVV 245
I +E + + + +S GD+R+AITYLQSA R F + IS + +++G +P +++
Sbjct: 187 ISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLI 246
Query: 246 NALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARICKKLAE 305
L CK +FD V ++IA+GYPV+Q++SQ+F+ V+ DL QK+ I K+
Sbjct: 247 KQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGN 306
Query: 306 ADKCLVDGADEYLQLLDVVSQTMQ 330
D+ L+DG++E+LQL D+ S M+
Sbjct: 307 VDRNLIDGSEEFLQLFDLSSYIMK 330
BLAST of MS004572 vs. ExPASy TrEMBL
Match:
A0A6J1C0Y1 (replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE=3 SV=1)
HSP 1 Score: 652.5 bits (1682), Expect = 9.5e-184
Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVVNALFAACKSGNFDLANKEVNNV AEGYPV QMLSQIFEVVVEAN LQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 335
BLAST of MS004572 vs. ExPASy TrEMBL
Match:
A0A6J1IVB8 (replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 SV=1)
HSP 1 Score: 624.4 bits (1609), Expect = 2.8e-175
Identity = 321/337 (95.25%), Postives = 327/337 (97.03%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ LFAACKSGNFDLANKEVNNVIAEGYPV QMLSQIFEVV+EA+DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337
BLAST of MS004572 vs. ExPASy TrEMBL
Match:
A0A1S3B9T6 (LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=LOC103487609 PE=3 SV=1)
HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174
Identity = 316/336 (94.05%), Postives = 325/336 (96.73%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ALF ACKSGNFD ANKEVNNV+AEGYPV QMLSQIFEVV+E NDLQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 336
BLAST of MS004572 vs. ExPASy TrEMBL
Match:
A0A6J1FIS1 (replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=3 SV=1)
HSP 1 Score: 619.8 bits (1597), Expect = 6.8e-174
Identity = 319/337 (94.66%), Postives = 326/337 (96.74%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
PREVV+ LFAAC+SGNFDLANKEVNNVIAEGYPV QMLSQIFEVV+EA+DLQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337
BLAST of MS004572 vs. ExPASy TrEMBL
Match:
A0A0A0KYI8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV=1)
HSP 1 Score: 618.2 bits (1593), Expect = 2.0e-173
Identity = 314/336 (93.45%), Postives = 325/336 (96.73%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARIC 300
P+EVV+ALF ACKSGNFD ANK+VNNV+AEGYPV QMLSQIFEVV+E NDLQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQL 337
KKLAEADKCLVDGADEYLQLLDVVSQTMQ S+QL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQL 336
BLAST of MS004572 vs. TAIR 10
Match:
AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 558.9 bits (1439), Expect = 2.7e-159
Identity = 281/335 (83.88%), Postives = 307/335 (91.64%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS RQ GYPCP FKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEA-NDLQDEQKARI 300
P EVVN LF ACKSG+FD+ANKEV+N++AEGYP +Q+++Q+F++V EA +D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
CK LAE DK LVDGADEYLQLLDV S T+ A M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335
BLAST of MS004572 vs. TAIR 10
Match:
AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 537.3 bits (1383), Expect = 8.5e-153
Identity = 274/335 (81.79%), Postives = 300/335 (89.55%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFG VLELNASDDRGINVVRTKIKDFA VAVGS RQ GYPCP FKIII
Sbjct: 61 AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEA-NDLQDEQKARI 300
P EVVN LF ACKSG+FD+ANKEV+N++AEGYP +Q+++Q+F++V EA +D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
CK LAE DK LVDGADEYLQLLDV S T+ A M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 328
BLAST of MS004572 vs. TAIR 10
Match:
AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 532.3 bits (1370), Expect = 2.8e-151
Identity = 272/335 (81.19%), Postives = 296/335 (88.36%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAP+ QSSQPWVEKYRPKQVKDVAHQ+EV CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS RQ GYPCP FKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEA-NDLQDEQKARI 300
P EVVN LF ACKSG+FD+ANKEV+N++AEGYP +Q+++Q+F++V EA +D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
CK LAE DK LVDGADEYLQLLDV S T+ A M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 323
BLAST of MS004572 vs. TAIR 10
Match:
AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 529.3 bits (1362), Expect = 2.3e-150
Identity = 263/309 (85.11%), Postives = 288/309 (93.20%), Query Frame = 0
Query: 1 MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS RQ GYPCP FKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 241 PREVVNALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEA-NDLQDEQKARI 300
P EVVN LF ACKSG+FD+ANKEV+N++AEGYP +Q+++Q+F++V EA +D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 301 CKKLAEADK 309
CK LAE DK
Sbjct: 301 CKCLAETDK 309
BLAST of MS004572 vs. TAIR 10
Match:
AT1G63160.1 (replication factor C 2 )
HSP 1 Score: 198.7 bits (504), Expect = 7.2e-51
Identity = 127/330 (38.48%), Postives = 186/330 (56.36%), Query Frame = 0
Query: 8 SQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLF 67
++PWVEKYRP +V D+ ++ V L + P+++ GPPGTGKTT+ LA+AH+L
Sbjct: 14 NEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 73
Query: 68 GPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSM 127
G YK VLELNASDDRGI+VVR KIK FA Q++ P K++ILDEADSM
Sbjct: 74 GTN-YKEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSM 133
Query: 128 TEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHIC 187
T AQ ALRRT+E +S TRF CN ++IIEP+ SRCA RF LS++ + R+L +
Sbjct: 134 TSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVV 193
Query: 188 NEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISV-SGVIPREVVN 247
E + E L + + GD+R+A+ LQ+ F S ++ +++ V P V N
Sbjct: 194 AAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGF-SFVNQENVFKVCDQPHPLHVKN 253
Query: 248 ALFAACKSGNFDLANKEVNNVIAEGYPVTQMLSQIFEVVVEANDLQDEQKARICKKLAEA 307
+ +S FD+A + + GY T +++ +F +++ D+ + K K+ A
Sbjct: 254 IVRNVLES-KFDIACDGLKQLYDLGYSPTDIITTLFR-IIKNYDMAEYLKLEFMKETGFA 313
Query: 308 DKCLVDGADEYLQL------LDVVSQTMQA 331
+ DG YLQL L +V +T +A
Sbjct: 314 HMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134048.1 | 2.0e-183 | 99.10 | replication factor C subunit 4 [Momordica charantia] | [more] |
XP_038897028.1 | 2.3e-176 | 95.24 | replication factor C subunit 4 [Benincasa hispida] | [more] |
XP_023523758.1 | 3.3e-175 | 95.25 | replication factor C subunit 4 [Cucurbita pepo subsp. pepo] | [more] |
XP_022981026.1 | 5.7e-175 | 95.25 | replication factor C subunit 4 [Cucurbita maxima] | [more] |
KAG6608033.1 | 1.3e-174 | 95.25 | Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q93ZX1 | 3.9e-158 | 83.88 | Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1 | [more] |
Q9FXM3 | 3.3e-157 | 83.53 | Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 ... | [more] |
P35249 | 3.9e-102 | 58.88 | Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2 | [more] |
Q99J62 | 8.7e-102 | 57.94 | Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1 | [more] |
Q54MD4 | 1.3e-92 | 51.85 | Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C0Y1 | 9.5e-184 | 99.10 | replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE... | [more] |
A0A6J1IVB8 | 2.8e-175 | 95.25 | replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 ... | [more] |
A0A1S3B9T6 | 2.3e-174 | 94.05 | LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=L... | [more] |
A0A6J1FIS1 | 6.8e-174 | 94.66 | replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=... | [more] |
A0A0A0KYI8 | 2.0e-173 | 93.45 | AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT1G21690.1 | 2.7e-159 | 83.88 | ATPase family associated with various cellular activities (AAA) | [more] |
AT1G21690.4 | 8.5e-153 | 81.79 | ATPase family associated with various cellular activities (AAA) | [more] |
AT1G21690.2 | 2.8e-151 | 81.19 | ATPase family associated with various cellular activities (AAA) | [more] |
AT1G21690.3 | 2.3e-150 | 85.11 | ATPase family associated with various cellular activities (AAA) | [more] |
AT1G63160.1 | 7.2e-51 | 38.48 | replication factor C 2 | [more] |