MS002494 (gene) Bitter gourd (TR) v1

Overview


Name	MS002494
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold318: 528119 .. 528457 (-)
RNA-Seq Expression	MS002494
Synteny	MS002494

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACTGTGGACATTGTCAATGAGCTAAGCAATGGACAAGAACTATTCGTGCATTGCAAGTCCAAGGACGATGATTTGGGAGAACACAACCTCGACAGTGGAGCTCAATATGGGTTTACTTTCAAAGACAATGTTTGGCAAACAACATTGTTTTGGTGTTACTTGCGAAAGCCCGACAATAGTCATGCCGCTTTTGATGTTTATTGGTATGATATTAGCAAAGGTCATTGGCTTTATACAAGATGCGACTATAAAAATTGCATTTGGATTGCTAAAGCCGACGGGATTTACATAAAAAATATCCCTTCAAATCAAGACGAGCTTGTTCACCCGTGGGAA

mRNA sequence

TGGACTGTGGACATTGTCAATGAGCTAAGCAATGGACAAGAACTATTCGTGCATTGCAAGTCCAAGGACGATGATTTGGGAGAACACAACCTCGACAGTGGAGCTCAATATGGGTTTACTTTCAAAGACAATGTTTGGCAAACAACATTGTTTTGGTGTTACTTGCGAAAGCCCGACAATAGTCATGCCGCTTTTGATGTTTATTGGTATGATATTAGCAAAGGTCATTGGCTTTATACAAGATGCGACTATAAAAATTGCATTTGGATTGCTAAAGCCGACGGGATTTACATAAAAAATATCCCTTCAAATCAAGACGAGCTTGTTCACCCGTGGGAA

Coding sequence (CDS)

TGGACTGTGGACATTGTCAATGAGCTAAGCAATGGACAAGAACTATTCGTGCATTGCAAGTCCAAGGACGATGATTTGGGAGAACACAACCTCGACAGTGGAGCTCAATATGGGTTTACTTTCAAAGACAATGTTTGGCAAACAACATTGTTTTGGTGTTACTTGCGAAAGCCCGACAATAGTCATGCCGCTTTTGATGTTTATTGGTATGATATTAGCAAAGGTCATTGGCTTTATACAAGATGCGACTATAAAAATTGCATTTGGATTGCTAAAGCCGACGGGATTTACATAAAAAATATCCCTTCAAATCAAGACGAGCTTGTTCACCCGTGGGAA

Protein sequence

WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE

Homology

[Close]

BLAST of MS002494 vs. NCBI nr
Match: XP_022152463.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 261.2 bits (666), Expect = 4.3e-66
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN
Sbjct: 34  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE
Sbjct: 94  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. NCBI nr
Match: XP_022143694.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 5.2e-48
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V+IVNEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCYLRKP+N
Sbjct: 35  WHVNIVNELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNN 94

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           SHA FDVYW D  KG+WLYTRC++K CIWIAK DGIYIK+IP NQD+L+H WE
Sbjct: 95  SHADFDVYWVDNGKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE 147

[Close]

BLAST of MS002494 vs. NCBI nr
Match: XP_023005093.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTV +VN L  GQ L  HCKSK+DDLG+HNL +GA + FTFKDNVWQTT FWC L KP+N
Sbjct: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDHNLATGALFSFTFKDNVWQTTEFWCTLTKPNN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           +HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN  +NQDELVHPWE
Sbjct: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. NCBI nr
Match: XP_023514776.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 7.8e-44
Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTV +VN L  GQ L  HCKSK+DDLG+ N+ +GA Y FTFKDNVWQTT FWC L KP+N
Sbjct: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           +HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN  +NQDELVHPWE
Sbjct: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. NCBI nr
Match: XP_022959591.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 76/113 (67.26%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTV +VN L  GQ L  HCKSK+DD+G+ N+ +GA Y FTFKDNVWQTT FWC L KP+N
Sbjct: 34  WTVQVVNGLGGGQTLLAHCKSKNDDMGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           +HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN  +NQDELVHPWE
Sbjct: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-27
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V +VN L+ G+ LF+HCKSK+DDLGE NL    ++ + F +N+  +T FWCY+ K DN
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DN 100

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
            H   +V+W D+     L+ RC +KNCIW AK DG+Y+ N  S +D L   WE
Sbjct: 101 GHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of MS002494 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-24
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V + N L+ G+ LF+HCKSK++DLG+ NL    ++ + F +N+  +TLFWCY+ K D+
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-DD 100

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
            H    V+W D+     L+ RCD+KNC+W AK DG+Y+ N    +D L   W+
Sbjct: 101 GHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of MS002494 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 2   TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNS 61
           TV+I N+L N   L  HCKSKDDDLG   L  G  + F+F    +  TL++C    P+ S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 62  HAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 113
           H +FD+Y      G     +C+   C+W  + +G    N  + Q +L +PW
Sbjct: 109 H-SFDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of MS002494 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-12
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 0


Query: 3   VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSH 62
           VDI+N++    +L +HCKSK  DLG  +L     +GFT   NVW+TTLF+C+    + S 
Sbjct: 31  VDIINDIGPNVQLGLHCKSKGKDLGPQSLAPHQHWGFTASLNVWETTLFFCHFVWENQSR 90

Query: 63  AAFDVYWYDISKGHWLYTRCDYKNCIWIAKADG 96
                 W+DI K       C Y  C+W  +  G
Sbjct: 91  ------WFDILKEKRDTIVCKYHPCVWSIRPSG 117

[Close]

BLAST of MS002494 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-11
Identity = 38/102 (37.25%), Postives = 50/102 (49.02%), Query Frame = 0


Query: 11  NGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWY 70
           N   L VHCKS+DDD G H L  G  YG+ F  N   +TL++C   +       FD+Y  
Sbjct: 40  NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIY-- 99

Query: 71  DISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 113
              K     +RC  +NC W AK DGIY       ++ L + W
Sbjct: 100 ---KAVRDSSRC--RNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS002494 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.1e-66
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN
Sbjct: 34  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE
Sbjct: 94  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. ExPASy TrEMBL
Match: A0A6J1CQ33 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V+IVNEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCYLRKP+N
Sbjct: 35  WHVNIVNELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNN 94

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           SHA FDVYW D  KG+WLYTRC++K CIWIAK DGIYIK+IP NQD+L+H WE
Sbjct: 95  SHADFDVYWVDNGKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE 147

[Close]

BLAST of MS002494 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.6e-45
Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTV +VN L  GQ L  HCKSK+DDLG+HNL +GA + FTFKDNVWQTT FWC L KP+N
Sbjct: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDHNLATGALFSFTFKDNVWQTTEFWCTLTKPNN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           +HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN  +NQDELVHPWE
Sbjct: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. ExPASy TrEMBL
Match: A0A6J1H5A3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.5e-44
Identity = 76/113 (67.26%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           WTV +VN L  GQ L  HCKSK+DD+G+ N+ +GA Y FTFKDNVWQTT FWC L KP+N
Sbjct: 34  WTVQVVNGLGGGQTLLAHCKSKNDDMGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
           +HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN  +NQDELVHPWE
Sbjct: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of MS002494 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 75/112 (66.96%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKPDN
Sbjct: 31  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPDN 90

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 113
           ++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKNI  N+DEL H W
Sbjct: 91  ANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW 142

[Close]

BLAST of MS002494 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 122.1 bits (305), Expect = 2.9e-28
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V +VN L+ G+ LF+HCKSK+DDLGE NL    ++ + F +N+  +T FWCY+ K DN
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DN 100

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
            H   +V+W D+     L+ RC +KNCIW AK DG+Y+ N  S +D L   WE
Sbjct: 101 GHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of MS002494 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 1   WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDN 60
           W V + N L+ G+ LF+HCKSK++DLG+ NL    ++ + F +N+  +TLFWCY+ K D+
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-DD 100

Query: 61  SHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPWE 114
            H    V+W D+     L+ RCD+KNC+W AK DG+Y+ N    +D L   W+
Sbjct: 101 GHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of MS002494 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-16
Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 3   VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSH 62
           V + N+L + + L VHC+SKDDDLGEH L  G  Y FTF DN+WQTT F C + +  N  
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 63  AAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIY 98
              D   Y+ S     +++    +C WI + DGIY
Sbjct: 89  HHLDFVAYETS-----WSKALEASCKWIGREDGIY 118

[Close]

BLAST of MS002494 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 2   TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNS 61
           TV+I N+L N   L  HCKSKDDDLG   L  G  + F+F    +  TL++C    P+ S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 62  HAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVHPW 113
           H +FD+Y      G     +C+   C+W  + +G    N  + Q +L +PW
Sbjct: 109 H-SFDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of MS002494 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15
Identity = 47/114 (41.23%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 2   TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRK-PD- 61
           T+ + NEL+N + L V C+SKDD+LG+H L  G      F DNVW+ TLFWC L K PD 
Sbjct: 23  TLLVKNELNN-KVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDF 82

Query: 62  NSHAAFDVYWYDISKGHWLYTRCDY-KNCIWIAKADGIYIKNIPSNQDELVHPW 113
             H AFD Y     +  W   + D     +WIA+ DGIY    P    +  + W
Sbjct: 83  KLHVAFDAY-----RSQW---KADIGPRYLWIAREDGIYYTQHPETPPKKKYDW 127

The following BLAST results are available for this feature:

BLAST of MS002494 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152463.1	4.3e-66	100.00	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143694.1	5.2e-48	73.45	S-protein homolog 1-like [Momordica charantia]	[more]
XP_023005093.1	1.6e-44	69.03	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_023514776.1	7.8e-44	68.14	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959591.1	1.3e-43	67.26	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of MS002494 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.1e-27	46.90	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.5e-24	42.48	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	3.9e-14	36.04	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
B3H730	8.2e-12	37.63	S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1	[more]
F2Q9V4	4.1e-11	37.25	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of MS002494 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEX4	2.1e-66	100.00	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1	[more]
A0A6J1CQ33	2.5e-48	73.45	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1	[more]
A0A6J1L199	7.6e-45	69.03	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1	[more]
A0A6J1H5A3	6.5e-44	67.26	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1	[more]
A0A6J1CQW3	2.1e-42	66.96	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1	[more]

BLAST of MS002494 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	2.9e-28	46.90	S-protein homologue 1	[more]
AT4G29035.1	1.7e-25	42.48	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.5e-16	43.16	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	2.8e-15	36.04	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	2.8e-15	41.23	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 2..112 e-value: 6.4E-30 score: 103.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 1..104
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002494.1	MS002494.1	mRNA