MS002491 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA ISQEMEGRYLKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKWP Homology
BLAST of MS002491 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 311.2 bits (796), Expect = 4.7e-81 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS002491 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 221.1 bits (562), Expect = 6.4e-54 Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of MS002491 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]) HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51 Identity = 91/137 (66.42%), Postives = 111/137 (81.02%), Query Frame = 0
BLAST of MS002491 vs. NCBI nr
Match: XP_022143829.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 207.6 bits (527), Expect = 7.3e-50 Identity = 93/143 (65.03%), Postives = 112/143 (78.32%), Query Frame = 0
BLAST of MS002491 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 201.8 bits (512), Expect = 4.0e-48 Identity = 85/136 (62.50%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.5e-26 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15 Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13 Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.3e-81 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54 Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51 Identity = 91/137 (66.42%), Postives = 111/137 (81.02%), Query Frame = 0
BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.5e-50 Identity = 93/143 (65.03%), Postives = 112/143 (78.32%), Query Frame = 0
BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.9e-44 Identity = 80/133 (60.15%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of MS002491 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 119.0 bits (297), Expect = 3.2e-27 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of MS002491 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of MS002491 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of MS002491 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of MS002491 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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