MS002491 (gene) Bitter gourd (TR) v1

Overview


Name	MS002491
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold318: 520658 .. 521098 (-)
RNA-Seq Expression	MS002491
Synteny	MS002491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA

mRNA sequence

ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA

Coding sequence (CDS)

ATATCTCAAGAAATGGAAGGGAGATATCTGAAGCACTTTCTGGTTTTCTTGTTCGTCTCCTCGTTGGCTATAGTTGAGCGAATCGAGGCTGTACCACTTTCCAAATGGCAAATCCACGTTAGGAATGAGCTGAGCAACACTCAAATGCTCTTTGTGCATTGCAAATCGAAAAACGACGATCTAGGTGAACACAACCTCAGCGTTGGGACTGAATTTAACTGGCGTTTCAGGGTAAATATTTGGGACACAACACTATATTGGTGCTACTTACGGAAGCCAAATGGACAATCTGTGTCGTTTGACGCATTTTGGGTTGAGAAGGATTCGATTTGGCTCTACTACAAATGTTTAGAGTCTAACTGTACTTGGAAGGCCAAAGATGATGGAATTTACCTGAGAAACAACCCGGATGGAAGAGATGTTTTCGTTCATAAGTGGCCA

Protein sequence

ISQEMEGRYLKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKWP

Homology

[Close]

BLAST of MS002491 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 311.2 bits (796), Expect = 4.7e-81
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 5   MEGRYLKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 64
           MEGRY KHFLVFLFVSSLAIVE+IEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH
Sbjct: 1   MEGRYPKHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 60

Query: 65  NLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK 124
           NLSVGTEFNWRFRVNIWDTTLYWCYL+KPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK
Sbjct: 61  NLSVGTEFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK 120

Query: 125 AKDDGIYLRNNPDGRDVFVHKWP 148
           AKDDGIYLRNNPDGRDVFVHKWP
Sbjct: 121 AKDDGIYLRNNPDGRDVFVHKWP 143

[Close]

BLAST of MS002491 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 6.4e-54
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 11  KHFLVFLFVSSLAIVERIEAV-PLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVG 70
           KHFLVFL V SL I+E IEA   L KWQIHV N LSN Q LFVHCKSK++DLGEHNL+ G
Sbjct: 12  KHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSG 71

Query: 71  TEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDG 130
           TEFNW FRVN+W+TTL+WCYL KP+G+S SFD FWVEK SIWL+Y+C  SNC W AKDDG
Sbjct: 72  TEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDG 131

Query: 131 IYLRNNPDGRDVFVHKW 147
           IYLR+NP  RD+ VH+W
Sbjct: 132 IYLRDNPVQRDILVHEW 148

[Close]

BLAST of MS002491 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51
Identity = 91/137 (66.42%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 12  HFLV--FLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVG 71
           HFLV  FLFV SLAIV+  +A+ L +W IH+ N LSN Q LFVHC+SK+DDLG+  LSVG
Sbjct: 35  HFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYLSVG 94

Query: 72  TEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDG 131
           TEFNW F++N WDTTL+WCYL+KPN +SVSF+AFWVE+ SIWL+Y+C +SNC W AKDDG
Sbjct: 95  TEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAKDDG 154

Query: 132 IYLRNNPDGRDVFVHKW 147
           IYL++NP  RD  VH W
Sbjct: 155 IYLKDNPANRDALVHNW 171

[Close]

BLAST of MS002491 vs. NCBI nr
Match: XP_022143829.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 207.6 bits (527), Expect = 7.3e-50
Identity = 93/143 (65.03%), Postives = 112/143 (78.32%), Query Frame = 0


Query: 5   MEGRYL-KHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGE 64
           M  R+L KHFLV L   SLAIVE   ++ L +W IHV N L N ++LFVHCKS++DDLGE
Sbjct: 1   MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGE 60

Query: 65  HNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTW 124
            NL  G EF+W FRVN+ DTTL+WC+LRKP+ QSVSFDAFWVEK SIWL+Y+C ++NC W
Sbjct: 61  QNLYDGAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIW 120

Query: 125 KAKDDGIYLRNNPDGRDVFVHKW 147
            AKDDG+YLR+NP  RDV VHKW
Sbjct: 121 TAKDDGVYLRDNPVQRDVLVHKW 143

[Close]

BLAST of MS002491 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-48
Identity = 85/136 (62.50%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 11  KHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGT 70
           K  +V  FV  LA+++  +A  L+KWQIHV N LSN Q+LFVHCKSK++DLGEH LSVG 
Sbjct: 8   KQCVVLFFVLCLAMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGEHKLSVGN 67

Query: 71  EFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGI 130
           EFNWRFRVN W+TTL+WCYL+KPN Q  SF AFW+E  S+WLY  C +SNC W AKDDG+
Sbjct: 68  EFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMCYDSNCIWIAKDDGV 127

Query: 131 YLRNNPDGRDVFVHKW 147
           YL++N +  DV +HKW
Sbjct: 128 YLKDNTNHEDVLIHKW 143

[Close]

BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-26
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 33  LSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRK 92
           +S+WQ+ V N L+  + LF+HCKSK DDLGE NL     F+W F  N+  +T +WCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 93  PNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
            NG  ++ + FW   D + L+++C   NC W AK DG+YL N+  G DV   KW
Sbjct: 98  DNGH-MNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 33  LSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRK 92
           +S+WQ+ V N L+  + LF+HCKSK +DLG+ NL     F+W F  N+  +TL+WCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 93  PNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
            +G  ++   FW   D + L+++C   NC W AK+DG+YL N+  G DV   KW
Sbjct: 98  DDGH-MNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0


Query: 10  LKHFLVFLFVSSLAIVERI--EAVPLSKWQIHVRNELS-------NTQMLFVHCKSKNDD 69
           L  +   +F+ S+ ++  I  EA+ + + +  +R  L+       N  +L +HCKS++DD
Sbjct: 9   LNSYFCSIFIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDD 68

Query: 70  LGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESN 129
           LG H L+ G  F W+F VN   +TLY+C   +   +   F+ +   +D    +Y+C  +N
Sbjct: 69  LGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRD----FYRC--AN 128

Query: 130 CTWKAKDDGIYLRNNPDGRDVFVHKW 147
           CTWKA+ DGIY  +    +    + W
Sbjct: 129 CTWKAEKDGIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 37  QIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQ 96
           +I V+N  +N  +L +HCKSK+DDLG H    G  + W+F VN  ++TLY+C   +    
Sbjct: 48  RITVKN--NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDN 107

Query: 97  SVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
              FD    E+D    +Y+C   NCTW AK D +Y  +N      +  KW
Sbjct: 108 KGVFDIDRAERD----FYRC--RNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of MS002491 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 46  NTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWV 105
           N  +L VHCKS++DD G H L  G  + W F VN  ++TLY+C   +   +   FD +  
Sbjct: 40  NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKA 99

Query: 106 EKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
            +DS     +C   NCTW+AK+DGIY       ++   +KW
Sbjct: 100 VRDS----SRC--RNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.3e-81
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 5   MEGRYLKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 64
           MEGRY KHFLVFLFVSSLAIVE+IEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH
Sbjct: 1   MEGRYPKHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEH 60

Query: 65  NLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK 124
           NLSVGTEFNWRFRVNIWDTTLYWCYL+KPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK
Sbjct: 61  NLSVGTEFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWK 120

Query: 125 AKDDGIYLRNNPDGRDVFVHKWP 148
           AKDDGIYLRNNPDGRDVFVHKWP
Sbjct: 121 AKDDGIYLRNNPDGRDVFVHKWP 143

[Close]

BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 11  KHFLVFLFVSSLAIVERIEAV-PLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVG 70
           KHFLVFL V SL I+E IEA   L KWQIHV N LSN Q LFVHCKSK++DLGEHNL+ G
Sbjct: 12  KHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSG 71

Query: 71  TEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDG 130
           TEFNW FRVN+W+TTL+WCYL KP+G+S SFD FWVEK SIWL+Y+C  SNC W AKDDG
Sbjct: 72  TEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDG 131

Query: 131 IYLRNNPDGRDVFVHKW 147
           IYLR+NP  RD+ VH+W
Sbjct: 132 IYLRDNPVQRDILVHEW 148

[Close]

BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 91/137 (66.42%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 12  HFLV--FLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVG 71
           HFLV  FLFV SLAIV+  +A+ L +W IH+ N LSN Q LFVHC+SK+DDLG+  LSVG
Sbjct: 35  HFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYLSVG 94

Query: 72  TEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDG 131
           TEFNW F++N WDTTL+WCYL+KPN +SVSF+AFWVE+ SIWL+Y+C +SNC W AKDDG
Sbjct: 95  TEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAKDDG 154

Query: 132 IYLRNNPDGRDVFVHKW 147
           IYL++NP  RD  VH W
Sbjct: 155 IYLKDNPANRDALVHNW 171

[Close]

BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.5e-50
Identity = 93/143 (65.03%), Postives = 112/143 (78.32%), Query Frame = 0


Query: 5   MEGRYL-KHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGE 64
           M  R+L KHFLV L   SLAIVE   ++ L +W IHV N L N ++LFVHCKS++DDLGE
Sbjct: 1   MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGE 60

Query: 65  HNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTW 124
            NL  G EF+W FRVN+ DTTL+WC+LRKP+ QSVSFDAFWVEK SIWL+Y+C ++NC W
Sbjct: 61  QNLYDGAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIW 120

Query: 125 KAKDDGIYLRNNPDGRDVFVHKW 147
            AKDDG+YLR+NP  RDV VHKW
Sbjct: 121 TAKDDGVYLRDNPVQRDVLVHKW 143

[Close]

BLAST of MS002491 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.9e-44
Identity = 80/133 (60.15%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 14  LVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFN 73
           LVFL  S+LA+     + P SKW+IH++NELSN Q +FVHCKSK++DLGEH L+ GTEF 
Sbjct: 45  LVFLVASALALA---ASKPFSKWEIHIKNELSNGQAMFVHCKSKDNDLGEHTLATGTEFK 104

Query: 74  WRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLR 133
           W F+VN WDTTL+WCYLRKPNG  ++FDAFWVEK + WL  KC  + C W A+D+GIYL+
Sbjct: 105 WDFKVNFWDTTLFWCYLRKPNGHEMTFDAFWVEKRTEWLRVKCDGNICNWTAEDNGIYLK 164

Query: 134 NNPDGRDVFVHKW 147
           +N +  D FVH W
Sbjct: 165 DNSENLDEFVHYW 174

[Close]

BLAST of MS002491 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-27
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 33  LSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRK 92
           +S+WQ+ V N L+  + LF+HCKSK DDLGE NL     F+W F  N+  +T +WCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 93  PNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
            NG  ++ + FW   D + L+++C   NC W AK DG+YL N+  G DV   KW
Sbjct: 98  DNGH-MNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS002491 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 33  LSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRK 92
           +S+WQ+ V N L+  + LF+HCKSK +DLG+ NL     F+W F  N+  +TL+WCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 93  PNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
            +G  ++   FW   D + L+++C   NC W AK+DG+YL N+  G DV   KW
Sbjct: 98  DDGH-MNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS002491 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 37  QIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLRKPNGQ 96
           +I V+N  +N  +L +HCKSK+DDLG H    G  + W+F VN  ++TLY+C   +    
Sbjct: 48  RITVKN--NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDN 107

Query: 97  SVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVHKW 147
              FD    E+D    +Y+C   NCTW AK D +Y  +N      +  KW
Sbjct: 108 KGVFDIDRAERD----FYRC--RNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of MS002491 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15
Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 10  LKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVG 69
           + +  +F  V  L I        + + ++ + N+L ++++L VHC+SK+DDLGEH L +G
Sbjct: 1   MNNLFIFSIVIGLCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIG 60

Query: 70  TEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDG 129
            ++ + F  NIW TT + C +    G +      +V  ++ W   K LE++C W  ++DG
Sbjct: 61  QDYEFTFGDNIWQTTSFSCQM--DQGPNFKHHLDFVAYETSW--SKALEASCKWIGREDG 118

Query: 130 IY 132
           IY
Sbjct: 121 IY 118

[Close]

BLAST of MS002491 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 10  LKHFLVFLFVSSLAIVERIEAVPLSKWQIHVRNELS--NTQMLFVHCKSKNDDLGEHNLS 69
           +K+  +FLFV  L ++  +      K  I V+NEL+  N  +L VHCKSKN+D+G   L 
Sbjct: 1   MKNLSIFLFVVGLCMISDVYG---KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLK 60

Query: 70  VGTEFNWRFRVNIWDTTLYWCYLRKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKD 129
           +G   ++ F+ N W TT +WC L K  G             +I L+ K   S+  W A+D
Sbjct: 61  IGEVMSFSFKTNFWGTTEFWCNLYK--GPDYKRYRGITAYQAIGLFAKD-GSSYNWLARD 120

Query: 130 DGIYLRNN 136
           DGIY   +
Sbjct: 121 DGIYFHKD 122

The following BLAST results are available for this feature:

BLAST of MS002491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143780.1	4.7e-81	97.90	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143772.1	6.4e-54	71.53	S-protein homolog 74-like [Momordica charantia]	[more]
XP_016902699.1	3.9e-51	66.42	PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]	[more]
XP_022143829.1	7.3e-50	65.03	S-protein homolog 74-like [Momordica charantia]	[more]
XP_038896594.1	4.0e-48	62.50	S-protein homolog 1-like [Benincasa hispida]	[more]

BLAST of MS002491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.5e-26	44.74	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.4e-24	42.98	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN92	1.2e-15	30.82	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FI84	5.1e-14	37.27	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F2Q9V4	3.3e-13	37.62	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of MS002491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPR8	2.3e-81	97.90	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A6J1CRU0	3.1e-54	71.53	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A1S4E390	1.9e-51	66.42	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1CQH6	3.5e-50	65.03	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A6J1HAC3	4.9e-44	60.15	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1	[more]

BLAST of MS002491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.2e-27	44.74	S-protein homologue 1	[more]
AT4G29035.1	1.0e-25	42.98	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	3.6e-15	37.27	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.8e-15	31.97	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	5.3e-14	35.94	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..146 e-value: 2.1E-29 score: 102.1
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 26..132
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 26..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002491.1	MS002491.1	mRNA