Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGATAGGGAAAAGGTCTCTTTTAGCGTAGAGACTATTAACAAAATACATGGACTCCCAAACGATGAGGTGGAAGCATACCTTGGCCACCAACTGATCAACGCGCCTACTCAAGGTTTCGCAAGGATAATGTTAAAAAAGATCGTGTGGCTAGACGCTGAGTGGAAGAAGATACCTATGGGGAGGTTGCAACTCTACCCGCATCAACTTACAACTGAATCCAACGTTTGGCTTTTCTTTATAAAGAAGAAAATTCTTCCCACAAGGCATGATAGTGCGATGCCGTTTGACTACGCGATGCTTCTCTACTCCATCCTCATGAAGCAAGCGTTCAACTTAGGCTATTTAATGCAAGGGGCACTTTTCGCTTAG
mRNA sequence
ATGGTGGATAGGGAAAAGGTCTCTTTTAGCGTAGAGACTATTAACAAAATACATGGACTCCCAAACGATGAGGTGGAAGCATACCTTGGCCACCAACTGATCAACGCGCCTACTCAAGGTTTCGCAAGGATAATGTTAAAAAAGATCGTGTGGCTAGACGCTGAGTGGAAGAAGATACCTATGGGGAGGTTGCAACTCTACCCGCATCAACTTACAACTGAATCCAACGTTTGGCTTTTCTTTATAAAGAAGAAAATTCTTCCCACAAGGCATGATAGTGCGATGCCGTTTGACTACGCGATGCTTCTCTACTCCATCCTCATGAAGCAAGCGTTCAACTTAGGCTATTTAATGCAAGGGGCACTTTTCGCTTAG
Coding sequence (CDS)
ATGGTGGATAGGGAAAAGGTCTCTTTTAGCGTAGAGACTATTAACAAAATACATGGACTCCCAAACGATGAGGTGGAAGCATACCTTGGCCACCAACTGATCAACGCGCCTACTCAAGGTTTCGCAAGGATAATGTTAAAAAAGATCGTGTGGCTAGACGCTGAGTGGAAGAAGATACCTATGGGGAGGTTGCAACTCTACCCGCATCAACTTACAACTGAATCCAACGTTTGGCTTTTCTTTATAAAGAAGAAAATTCTTCCCACAAGGCATGATAGTGCGATGCCGTTTGACTACGCGATGCTTCTCTACTCCATCCTCATGAAGCAAGCGTTCAACTTAGGCTATTTAATGCAAGGGGCACTTTTCGCTTAG
Protein sequence
MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIPMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQGALFA
Homology
BLAST of MELO3C022543 vs. NCBI nr
Match:
TYK22187.1 (hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa])
HSP 1 Score: 134.0 bits (336), Expect = 8.6e-28
Identity = 63/121 (52.07%), Postives = 89/121 (73.55%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+R+KVSF++E IN+++GL ND +++Y LI PT+G +R++++ I WL A W +
Sbjct: 19 IVERKKVSFTMEEINELYGLLND-LDSYPSQSLIAEPTKGDSRMIIQLIAWLGAGWTRTT 78
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
LQLYPHQLTTE+NVWL FIKKKI+P +DS +P +Y +LLY + KQ FNLGY+M
Sbjct: 79 TRSLQLYPHQLTTEANVWLLFIKKKIIPMCYDSTVPIEYMLLLYCKMAKQPFNLGYMMNE 138
Query: 121 A 122
A
Sbjct: 139 A 138
BLAST of MELO3C022543 vs. NCBI nr
Match:
KAA0049609.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 64/124 (51.61%), Postives = 87/124 (70.16%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+ EKV F+ E IN+++ LPND + AY G +LI +G A+ ++K IVW +A+ P
Sbjct: 1226 IVEDEKVPFTTEEINELYDLPND-LGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTP 1285
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
RLQL+PHQLT E+NVWLFFIKKKI PT HDS + +YA++LY I K+ FNLGY+M
Sbjct: 1286 TRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNE 1345
Query: 121 ALFA 125
A +
Sbjct: 1346 AFLS 1348
BLAST of MELO3C022543 vs. NCBI nr
Match:
TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])
HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 64/124 (51.61%), Postives = 87/124 (70.16%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+ EKV F+ E IN+++ LPND + AY G +LI +G A+ ++K IVW +A+ P
Sbjct: 65 IVEDEKVPFTTEEINELYDLPND-LGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTP 124
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
RLQL+PHQLT E+NVWLFFIKKKI PT HDS + +YA++LY I K+ FNLGY+M
Sbjct: 125 TRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNE 184
Query: 121 ALFA 125
A +
Sbjct: 185 AFLS 187
BLAST of MELO3C022543 vs. NCBI nr
Match:
TYK09554.1 (hypothetical protein E5676_scaffold757G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 108.2 bits (269), Expect = 5.1e-20
Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI- 60
MV+REKV+F E IN+++GLP D+ +AY HQLIN PT+G R ML I W +W+ +
Sbjct: 1 MVEREKVAFRAEAINELYGLP-DKEDAYPCHQLINKPTEGLVRRMLGVIAWPCVDWESLA 60
Query: 61 ----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA 95
+LQLYPHQLT E++VWLFFIK KILP HD A
Sbjct: 61 NVYHATVKLQLYPHQLTIEASVWLFFIKIKILPMHHDEA 98
BLAST of MELO3C022543 vs. NCBI nr
Match:
KAA0067453.1 (hypothetical protein E6C27_scaffold40G001190 [Cucumis melo var. makuwa])
HSP 1 Score: 107.5 bits (267), Expect = 8.7e-20
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI- 60
MV+REKV+F E IN+++GLP D+ +AY HQLIN PT+G R ML I W +W+ +
Sbjct: 1 MVEREKVAFRAEAINELYGLP-DKEDAYPCHQLINKPTKGLVRRMLGVIAWPCVDWESLA 60
Query: 61 ----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA 95
+LQLYPHQLT E+++WLFFIK KILP HD A
Sbjct: 61 NVYHATVKLQLYPHQLTIEASIWLFFIKIKILPMHHDEA 98
BLAST of MELO3C022543 vs. ExPASy TrEMBL
Match:
A0A5D3DES7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00570 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 4.2e-28
Identity = 63/121 (52.07%), Postives = 89/121 (73.55%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+R+KVSF++E IN+++GL ND +++Y LI PT+G +R++++ I WL A W +
Sbjct: 19 IVERKKVSFTMEEINELYGLLND-LDSYPSQSLIAEPTKGDSRMIIQLIAWLGAGWTRTT 78
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
LQLYPHQLTTE+NVWL FIKKKI+P +DS +P +Y +LLY + KQ FNLGY+M
Sbjct: 79 TRSLQLYPHQLTTEANVWLLFIKKKIIPMCYDSTVPIEYMLLLYCKMAKQPFNLGYMMNE 138
Query: 121 A 122
A
Sbjct: 139 A 138
BLAST of MELO3C022543 vs. ExPASy TrEMBL
Match:
A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 6.7e-26
Identity = 64/124 (51.61%), Postives = 87/124 (70.16%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+ EKV F+ E IN+++ LPND + AY G +LI +G A+ ++K IVW +A+ P
Sbjct: 1226 IVEDEKVPFTTEEINELYDLPND-LGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTP 1285
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
RLQL+PHQLT E+NVWLFFIKKKI PT HDS + +YA++LY I K+ FNLGY+M
Sbjct: 1286 TRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNE 1345
Query: 121 ALFA 125
A +
Sbjct: 1346 AFLS 1348
BLAST of MELO3C022543 vs. ExPASy TrEMBL
Match:
A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 6.7e-26
Identity = 64/124 (51.61%), Postives = 87/124 (70.16%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKIP 60
+V+ EKV F+ E IN+++ LPND + AY G +LI +G A+ ++K IVW +A+ P
Sbjct: 65 IVEDEKVPFTTEEINELYDLPND-LGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTP 124
Query: 61 MGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSAMPFDYAMLLYSILMKQAFNLGYLMQG 120
RLQL+PHQLT E+NVWLFFIKKKI PT HDS + +YA++LY I K+ FNLGY+M
Sbjct: 125 TRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNE 184
Query: 121 ALFA 125
A +
Sbjct: 185 AFLS 187
BLAST of MELO3C022543 vs. ExPASy TrEMBL
Match:
A0A5D3CEC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00370 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI- 60
MV+REKV+F E IN+++GLP D+ +AY HQLIN PT+G R ML I W +W+ +
Sbjct: 1 MVEREKVAFRAEAINELYGLP-DKEDAYPCHQLINKPTEGLVRRMLGVIAWPCVDWESLA 60
Query: 61 ----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA 95
+LQLYPHQLT E++VWLFFIK KILP HD A
Sbjct: 61 NVYHATVKLQLYPHQLTIEASVWLFFIKIKILPMHHDEA 98
BLAST of MELO3C022543 vs. ExPASy TrEMBL
Match:
A0A5A7VH86 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001190 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 4.2e-20
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 1 MVDREKVSFSVETINKIHGLPNDEVEAYLGHQLINAPTQGFARIMLKKIVWLDAEWKKI- 60
MV+REKV+F E IN+++GLP D+ +AY HQLIN PT+G R ML I W +W+ +
Sbjct: 1 MVEREKVAFRAEAINELYGLP-DKEDAYPCHQLINKPTKGLVRRMLGVIAWPCVDWESLA 60
Query: 61 ----PMGRLQLYPHQLTTESNVWLFFIKKKILPTRHDSA 95
+LQLYPHQLT E+++WLFFIK KILP HD A
Sbjct: 61 NVYHATVKLQLYPHQLTIEASIWLFFIKIKILPMHHDEA 98
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK22187.1 | 8.6e-28 | 52.07 | hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa] | [more] |
| KAA0049609.1 | 1.4e-25 | 51.61 | transposase [Cucumis melo var. makuwa] | [more] |
| TYK15967.1 | 1.4e-25 | 51.61 | hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa] | [more] |
| TYK09554.1 | 5.1e-20 | 54.55 | hypothetical protein E5676_scaffold757G00370 [Cucumis melo var. makuwa] | [more] |
| KAA0067453.1 | 8.7e-20 | 53.54 | hypothetical protein E6C27_scaffold40G001190 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DES7 | 4.2e-28 | 52.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U806 | 6.7e-26 | 51.61 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE... | [more] |
| A0A5D3CVL7 | 6.7e-26 | 51.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CEC6 | 2.5e-20 | 54.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7VH86 | 4.2e-20 | 53.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
