|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAGAATTTAATGTTGAGTTAAAGAAAATTAGAATTGAAATCCATGAACGGGTCATGGAAGAATTGAATACTGAGCTAAAGAAAATAAGAGAAGAGATTCAAGAACAGGTCATGGAGGTGCAGAATGCAGAGCTAAAGAAGACGAGACAAGACATCGATAAGATTCAGGGGCAGGTCACGAAAATTTTC mRNA sequence ATGGAAGAATTTAATGTTGAGTTAAAGAAAATTAGAATTGAAATCCATGAACGGGTCATGGAAGAATTGAATACTGAGCTAAAGAAAATAAGAGAAGAGATTCAAGAACAGGTCATGGAGGTGCAGAATGCAGAGCTAAAGAAGACGAGACAAGACATCGATAAGATTCAGGGGCAGGTCACGAAAATTTTC Coding sequence (CDS) ATGGAAGAATTTAATGTTGAGTTAAAGAAAATTAGAATTGAAATCCATGAACGGGTCATGGAAGAATTGAATACTGAGCTAAAGAAAATAAGAGAAGAGATTCAAGAACAGGTCATGGAGGTGCAGAATGCAGAGCTAAAGAAGACGAGACAAGACATCGATAAGATTCAGGGGCAGGTCACGAAAATTTTC Protein sequence MEEFNVELKKIRIEIHERVMEELNTELKKIREEIQEQVMEVQNAELKKTRQDIDKIQGQVTKIF
Homology
BLAST of MC04g0690 vs. NCBI nr
Match: XP_022143515.1 (uncharacterized protein LOC111013388 [Momordica charantia]) HSP 1 Score: 89.0 bits (219), Expect = 1.95e-20 Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0 Query: 1 MEEFNVELKKIRIEIHERVMEELNTELKKIREEIQEQVMEVQNAELKKTRQDIDKIQGQV 60 MEEFN ELKKIR EIHERV+EELN ELK+IR+EIQE V EV N ELKK RQDIDKIQGQV Sbjct: 46 MEEFNAELKKIRDEIHERVIEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQV 105
Query: 61 TKIF 64 T I Sbjct: 106 TGIL 109
BLAST of MC04g0690 vs. NCBI nr
Match: XP_022153553.1 (uncharacterized protein LOC111021029 [Momordica charantia]) HSP 1 Score: 87.8 bits (216), Expect = 4.06e-19 Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0 Query: 1 MEEFNVELKKIRIEIHERVMEELNTELKKIREEIQEQVMEVQNAELKKTRQDIDKIQGQV 60 MEEFN ELK I EIHERV+EELN ELKKIR+EIQEQVMEVQN ELKK RQDID IQ QV Sbjct: 1 MEEFNAELKNISDEIHERVIEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQV 60
Query: 61 TKIF 64 KI Sbjct: 61 MKIL 64
BLAST of MC04g0690 vs. ExPASy TrEMBL
Match: A0A6J1CP05 (uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013388 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.46e-21 Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0 Query: 1 MEEFNVELKKIRIEIHERVMEELNTELKKIREEIQEQVMEVQNAELKKTRQDIDKIQGQV 60 MEEFN ELKKIR EIHERV+EELN ELK+IR+EIQE V EV N ELKK RQDIDKIQGQV Sbjct: 46 MEEFNAELKKIRDEIHERVIEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQV 105
Query: 61 TKIF 64 T I Sbjct: 106 TGIL 109
BLAST of MC04g0690 vs. ExPASy TrEMBL
Match: A0A6J1DHS7 (uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021029 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.96e-19 Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0 Query: 1 MEEFNVELKKIRIEIHERVMEELNTELKKIREEIQEQVMEVQNAELKKTRQDIDKIQGQV 60 MEEFN ELK I EIHERV+EELN ELKKIR+EIQEQVMEVQN ELKK RQDID IQ QV Sbjct: 1 MEEFNAELKNISDEIHERVIEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQV 60
Query: 61 TKIF 64 KI Sbjct: 61 MKIL 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022143515.1 | 1.95e-20 | 79.69 | uncharacterized protein LOC111013388 [Momordica charantia] | [more] |
XP_022153553.1 | 4.06e-19 | 79.69 | uncharacterized protein LOC111021029 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CP05 | 9.46e-21 | 79.69 | uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1DHS7 | 1.96e-19 | 79.69 | uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 6..59 |
Relationships
The following mRNA feature(s) are a part of this gene:
|