Lsi01G008020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G008020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B-like cyclin
Location	chr01: 6327312 .. 6333259 (-)
RNA-Seq Expression	Lsi01G008020
Synteny	Lsi01G008020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTAAGAAACATCAAATGCTGTTTTTATTTGTTTGATATTTCTTCTTTAGATTTAGAAACATCCTTCAATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGGTTGGTTTTTTGCTTTCTTTTTCTGTTTTTTACACTCTGATGATGGAAATGCCTGGTTTTTGGTTACCTTTATCTCTTTTTGATTCATTTCCAAAGAGGGGTTTTGATTTTTCTAAGGTCTTTTCCATCAATGGAAGTTTGAGTTCTTATCAAAAACAGGAATTTGGTCTCCCTAACCTTTTTCCTACTCATCTTCTCATTACTCTTCTTCTTTTCTTTTTGTTTGGTTTGATTATTCATAATGATGGGGTCTGTTTTTTTTGCTTTTCTTTTCTCAATTTCAACAGTTTTATGGTCCCTCAGTACTTATAATTCCATTGTGTGTCATCCTGTTAATCTTAGTTAGTTCATTATTTGATTCAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTGTAAGTTCCAAAAATCAAACAAGATTTTTCTTTTTTCTCTTTCCATATTTCTTGTCATGTAATAAAAATTTTCTTATATGTTTTATTATTTAGATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGGTCAAATGAATTTGAAAATTATTATTATTTATTTTCTGATTAAAAGGGGATAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGTGTTTTAAAGCTTGTTCTTTCCATTTACTGCCTGAAAAAATCAGTAGCATTCCCCAGAAATTAATGTGTTTGATACAGTTTTGTGGTTGGGAAAAATTAAATGCATGCAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGTAATACAAAAAGAACTTTGCTTTAACTCTTTTTTTCCCCCTTAAAAAAACACATTTTTGCTTATTTTAAACATTTGCTTTATGGGTTGGTTTTGCAGGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGAAAGAAAACACACAAAAGAGAGAAGGAAAAAAAAAGAAAAAAAAAGAGGGTGAATAAAATTTAGGTAAGTGGATAAGGAATTAAATCAGAGTGTTATTAGTTAGAGTCTTACTGAAAATGAAATTTTCCACAACATTTCATATTCACAAGTTTGAGATAGATAGAGTTAGAGTGAAAGAGAGAAAAAACACAGCAAAAAAACAGGAAACTGTTGCTCCAATTCCTGAATTCACTTTTGTAAACAGAATTTTACTGTAAAAGAAGGAAGCAGTAATAAAAAGAAGCAGAGGAAGAAGAATATGAATATGAAAGAGAGGAGGAGATGAGTGCTGTGGTGTGTGTGTTTTTGCAGTGAGTTTTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTGGATTTATTTTCCTTAGGGGTTTTAAATAATTGAATTATTGTATGGCAGTGTGGTGGAAGGGGGAAGGAGAGCAGGGCAGAGCAGAACAGAGCAGTGGAATTATATTATGTGTTTGTTTTTGGGGATTGAGAAAGAGGGTCCCACTTGGTCAAACTTATCTGTGTTTTTGAGTGTATGACCAGTCAACATCTGGGATGGATTGCTCTGTAAAACCAACTCTGTATCTGTATGTATATAATGATTATTCAAAAACAAAGGAAAAGAAAAAACATTGGAAGTATTGCAAAATTTGCACTGAATTTTATTTTTCCTTCAAGTGCACAAAAACAGAGGAGAGGTAGAGGTTTCAGCTGGCATTGCCATTTGTGAAGGGGAAGAAGCCATGAATTTTCTTGAAGGACATTTAATGAAGAAATTGTGTGCATTTTTGAGTCACTAAGTTTTGTGGGAGGCAGGGTTTGGGTTGCCATGGTTGTCACTGACAAGCATCCACTTAAAAACATTGGCTTTGCAACAGACATTAAAGAACAATAAAGTTTCCTTAAACGACAGCTAAGCATGGTCAAGTCTCAAATGTTGTAAGTATCCACTTGAATTCACTCGTCCTTTCGAATATTTCTGTTTCTATCAAATAATTCAATTTCCATCTCTTACGTATACATAATACCAGCTTCAATCTCATTTTTATTATATGTATATTATTATGTGTTTGTATCTAAGGTTTGGATAAAATATTACAAGAGTAACAAATCTCACTTTCAAAAAATTGATGAACTCCAAGTCCTATAAACGTAAAAATGGTGTAAGTGGTGAAAAAGAACGATCTTACAATTTCGATTGAATAGAGAATTCCACGCGATTGTAATAATTTTTCACAC

mRNA sequence

TTTCTTAAGAAATTTGTTTGATATTTCTTCTTTAGATTTAGAAACATCCTTCAATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGAAAGAAAACACACAAAAGAGAGAAGGAAAAAAAAAGAAAAAAAAAGAGGGTGAATAAAATTTAGGTAAGTGGATAAGGAATTAAATCAGAGTGTTATTAGTTAGAGTCTTACTGAAAATGAAATTTTCCACAACATTTCATATTCACAAGTTTGAGATAGATAGAGTTAGAGTGAAAGAGAGAAAAAACACAGCAAAAAAACAGGAAACTGTTGCTCCAATTCCTGAATTCACTTTTGTAAACAGAATTTTACTGTAAAAGAAGGAAGCAGTAATAAAAAGAAGCAGAGGAAGAAGAATATGAATATGAAAGAGAGGAGGAGATGAGTGCTGTGGTGTGTGTGTTTTTGCAGTGAGTTTTTTTTTTTTTTTTGGATTTATTTTCCTTAGGGGTTTTAAATAATTGAATTATTGTATGGCAGTGTGGTGGAAGGGGGAAGGAGAGCAGGGCAGAGCAGAACAGAGCAGTGGAATTATATTATGTGTTTGTTTTTGGGGATTGAGAAAGAGGGTCCCACTTGGTCAAACTTATCTGTGTTTTTGAGTGTATGACCAGTCAACATCTGGGATGGATTGCTCTGTAAAACCAACTCTGTATCTGTATGTATATAATGATTATTCAAAAACAAAGGAAAAGAAAAAACATTGGAAGTATTGCAAAATTTGCACTGAATTTTATTTTTCCTTCAAGTGCACAAAAACAGAGGAGAGGTAGAGGTTTCAGCTGGCATTGCCATTTGTGAAGGGGAAGAAGCCATGAATTTTCTTGAAGGACATTTAATGAAGAAATTGTGTGCATTTTTGAGTCACTAAGTTTTGTGGGAGGCAGGGTTTGGGTTGCCATGGTTGTCACTGACAAGCATCCACTTAAAAACATTGGCTTTGCAACAGACATTAAAGAACAATAAAGTTTCCTTAAACGACAGCTAAGCATGGTCAAGTCTCAAATGTTGTAAGTATCCACTTGAATTCACTCGTCCTTTCGAATATTTCTGTTTCTATCAAATAATTCAATTTCCATCTCTTACGTATACATAATACCAGCTTCAATCTCATTTTTATTATATGTATATTATTATGTGTTTGTATCTAAGGTTTGGATAAAATATTACAAGAGTAACAAATCTCACTTTCAAAAAATTGATGAACTCCAAGTCCTATAAACGTAAAAATGGTGTAAGTGGTGAAAAAGAACGATCTTACAATTTCGATTGAATAGAGAATTCCACGCGATTGTAATAATTTTTCACAC

Coding sequence (CDS)

ATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGA

Protein sequence

MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGNSSSSSSHDSPDSKRRRQDRPSSNDDSSPSSPVK

Homology

[Close]

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot
Match: P42752 (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-75
Identity = 171/348 (49.14%), Postives = 228/348 (65.52%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVG----GSVP 340
           SISGE +  D  KA+ S  Y+++ERV +C+ L+R L+   NV   S++         +VP
Sbjct: 282 SISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVP 341

Query: 341 QSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
            SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 ASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 360

[Close]

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 9.6e-68
Identity = 158/340 (46.47%), Postives = 209/340 (61.47%), Query Frame = 0


Query: 43  PNVDCVGSETFLGSALESEERVGRMVEKEIEHLPTHDYLKRMLS----GDLDLKFRREAV 102
           P VD  G    +  A+ SEE V R+VE E +H+P  DY +R+ +    GDLDL+ R +A+
Sbjct: 52  PCVDVAG----VDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAI 111

Query: 103 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 162
           DWIWK       H++YSF PL+ CL++NYLDRFLS+Y LP  K W  QLL+VAC+SLAAK
Sbjct: 112 DWIWK------VHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAK 171

Query: 163 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 222
           MEET+VP  +D                    LQV E ++VFEAKTIQRMELLVLS LKW+
Sbjct: 172 MEETDVPQSLD--------------------LQVGEERYVFEAKTIQRMELLVLSTLKWR 231

Query: 223 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISI 282
           MQA+TPFS++DYFL ++         S   SS+LIL   +G + L FRPSEIA AVA ++
Sbjct: 232 MQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIARGTECLGFRPSEIAAAVAAAV 291

Query: 283 SGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGV 342
            GE  A        +F ++ KER+  C E+I+ + LI+    +     V  S+P+SP GV
Sbjct: 292 VGEEHA--------AFSHVNKERMSHCQEVIQAMELIHPKPSSPSRVFVSSSIPRSPTGV 351

Query: 343 LDAA-CLSYKTEELLTAGSCGNSSSSSSHD-SPDSKRRRQ 377
           LDAA CLSY++++   A     SS    HD SP S +RR+
Sbjct: 352 LDAAGCLSYRSDDSAVASHYAASSWGYEHDSSPVSSKRRK 353

[Close]

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot
Match: Q8LGA1 (Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-64
Identity = 155/318 (48.74%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK-CGVMKQAHAH 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK C V       
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEV------- 98

Query: 116 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 175
           + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID    
Sbjct: 99  HQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID---- 158

Query: 176 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 235
                           LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I YFL 
Sbjct: 159 ----------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLR 218

Query: 236 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 295
           K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + +  
Sbjct: 219 KMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF 278

Query: 296 S--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLSYKT 355
           S  F  ++KERV K  E+I                +      Q+P GVL+  A C S+KT
Sbjct: 279 SPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFSFKT 306

Query: 356 EELLTAGSCGNSSSSSSH 367
            +         SSSS +H
Sbjct: 339 HD---------SSSSYTH 306

[Close]

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot
Match: Q8LHA8 (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.3e-61
Identity = 143/322 (44.41%), Postives = 202/322 (62.73%), Query Frame = 0


Query: 58  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 117
           ++S+E V  +VEKE++H P   YL+++  G L+  +R++A+DWI K       H++Y+FG
Sbjct: 59  IDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICK------VHSYYNFG 118

Query: 118 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 177
           PLSL L++NYLDRFLS ++LP D+SW  QLLSV+C+SLA KMEET VPLP+D        
Sbjct: 119 PLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMD-------- 178

Query: 178 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 237
                       LQV + ++VFEA+ I+RMEL+V+  LKW++QA+TPFSFI YFL K   
Sbjct: 179 ------------LQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNE 238

Query: 238 EQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAI-LSFPY 297
            +    T  S  S L + T+K   FL FRPSEIA AV +++  E Q    N A+  S   
Sbjct: 239 GKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIP 298

Query: 298 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 357
           + KE VM+C EL+ + +L+  +  NS   N   SVP SP+ VLDAAC S+++++     S
Sbjct: 299 VNKEMVMRCYELMVEKALVKKI-RNS---NASSSVPHSPITVLDAACFSFRSDDTTLGSS 350

Query: 358 CGNSSS---SSSHDSPDSKRRR 376
             NS++   +S   +P SKRRR
Sbjct: 359 QSNSNNKDYNSQDSAPASKRRR 350

[Close]

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-60
Identity = 145/334 (43.41%), Postives = 196/334 (58.68%), Query Frame = 0


Query: 59  ESEERVGRMVEKEIEHLPTHDYLKRML--SGDLDLKFRREAVDWIWKCGVMKQAHAHYSF 118
           +SEE V  +VE+E  H+P  DY +R+    GD+DL+ R EA+ WIW      + + +Y+F
Sbjct: 73  QSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIW------EVYTYYNF 132

Query: 119 GPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFF 178
             ++  L++NYLDRFLS Y LP  + W  QLLSVAC+S+AAKMEET VP  +D       
Sbjct: 133 SSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLD------- 192

Query: 179 NLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKIT 238
                        LQ+ EP+F+FE +TI RMELLVL+ L W+MQA+TPFS+IDYFL K+ 
Sbjct: 193 -------------LQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLN 252

Query: 239 VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 298
                P +   +SS+LIL    G  FLEFRPSEIA AVA +++GE           +F +
Sbjct: 253 SGNAAPRSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFTH 312

Query: 299 MEKERVMKCIELIRD----LSLINNVY------ENSMAGNVGGSVPQSPVGVLDAACLSY 358
           ++K RV++C E I+D    ++ IN V           A     SVP+SPV VLDA CLSY
Sbjct: 313 VDKGRVLQCQEAIQDHHYSMATINTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSY 372

Query: 359 KTE--ELLTAGSCGNSSSSSSHDSP--DSKRRRQ 377
           K++  +  T  S G     S  DS    SK+RR+
Sbjct: 373 KSDDTDAATIASHGGGRRKSCFDSSPVTSKKRRK 380

[Close]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL
Match: A0A0A0KLT3 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G499110 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.2e-165
Identity = 330/399 (82.71%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPN-RRTRDPNVDCVGSETFLGSA- 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+ RRTRDPNV+  GSE FLGS+ 
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSV 60

Query: 61  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 120
           LESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFG
Sbjct: 61  LESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFG 120

Query: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 180
           PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID        
Sbjct: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID-------- 180

Query: 181 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 240
                       LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+V
Sbjct: 181 ------------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISV 240

Query: 241 E-QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 300
           E Q+IP+  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPY
Sbjct: 241 EQQNIPNLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPY 300

Query: 301 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 360
           MEKERVMKCI+LIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS
Sbjct: 301 MEKERVMKCIDLIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGS 360

Query: 361 C--GNSSSSSSHDSPDSKRRRQDRPSSNDD-SSPSSPVK 393
           C  GNSSSSSSHDS DSKRRRQDRPSSNDD +SPSSPVK
Sbjct: 361 CGNGNSSSSSSHDSQDSKRRRQDRPSSNDDNTSPSSPVK 366

[Close]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL
Match: A0A1S3B257 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103484941 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 6.7e-165
Identity = 330/401 (82.29%), Postives = 343/401 (85.54%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPNRRTRDPNVDCVGSETFLGSA-L 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+RRTR+PNV+  GSE FLGS+ L
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRTREPNVEFFGSENFLGSSVL 60

Query: 61  ESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGP 120
           ESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGP
Sbjct: 61  ESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGP 120

Query: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNL 180
           LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID         
Sbjct: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID--------- 180

Query: 181 LSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE 240
                      LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE
Sbjct: 181 -----------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVE 240

Query: 241 -QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYM 300
            Q+IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYM
Sbjct: 241 QQNIPSFYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYM 300

Query: 301 EKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSC 360
           EKERVMKCIELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS 
Sbjct: 301 EKERVMKCIELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSY 360

Query: 361 GN-----SSSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           GN     SSSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 361 GNGNSSSSSSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 368

[Close]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL
Match: A0A6J1BWA4 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005305 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.7e-150
Identity = 301/392 (76.79%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTEN N CFD+  +C+ATN EF           +++P+VDC   ET +GSALES
Sbjct: 1   MADSFYCTENTNSCFDEFDNCDATNYEF----------GSQNPSVDC---ETLMGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV  +VEKEIEHLP +DYLKRM SGDLDLKFRREAVDWIWK      AHAHYSFG LS
Sbjct: 61  EERVRALVEKEIEHLPRNDYLKRMRSGDLDLKFRREAVDWIWK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEA+TIQRMELLVLSRLKWKMQAITP SFIDYFL  ITV QH
Sbjct: 181 ---------LQVEEPKFVFEARTIQRMELLVLSRLKWKMQAITPLSFIDYFLRNITVGQH 240

Query: 241 IPSTS-FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEK 300
           +PS S   KS+QLILSTIKGIDFLEFRPSEIALAVAISISGE QAPD++KAILSFPYMEK
Sbjct: 241 VPSLSLLLKSAQLILSTIKGIDFLEFRPSEIALAVAISISGELQAPDIDKAILSFPYMEK 300

Query: 301 ERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           ERVMKCIELI+DLSLINNVY NS+ G  GGS+PQSPVGVLDAAC SYKTEE LTAGSCGN
Sbjct: 301 ERVMKCIELIKDLSLINNVYGNSLGGGGGGSIPQSPVGVLDAACFSYKTEE-LTAGSCGN 352

Query: 361 SSSS---SSHDSPDSKRRRQDRPSSNDDSSPS 389
           SSSS   SSHDSPDSKRRRQDRPS   DS+PS
Sbjct: 361 SSSSSSFSSHDSPDSKRRRQDRPSPKVDSNPS 352

[Close]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL
Match: A0A5D3CNJ1 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003160 PE=3 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 6.4e-139
Identity = 280/333 (84.08%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 67  MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMN 126
           MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGPLSLCLSMN
Sbjct: 1   MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGPLSLCLSMN 60

Query: 127 YLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDF 186
           YLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID                 
Sbjct: 61  YLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------------- 120

Query: 187 NFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE-QHIPSTS 246
              LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE Q+IPS  
Sbjct: 121 ---LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSFY 180

Query: 247 FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKC 306
           FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYMEKERVMKC
Sbjct: 181 FSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERVMKC 240

Query: 307 IELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN-----S 366
           IELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS GN     S
Sbjct: 241 IELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSYGNGNSSSS 300

Query: 367 SSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           SSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 301 SSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 307

[Close]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL
Match: A0A6J1KS57 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111497143 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 2.3e-133
Identity = 268/379 (70.71%), Postives = 295/379 (77.84%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTE+ N CF D+ +CNATNNEFER              ++C GS   + SA++S
Sbjct: 1   MADSFYCTESVNTCF-DELECNATNNEFER--------------IECFGSGNSMVSAIQS 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           E+R+  MVE+EI+HLP HDYLKR+  G LD KFRR A+DWI K      AHAHYSFG LS
Sbjct: 61  EQRIREMVEQEIQHLPRHDYLKRLRCGALDSKFRRAAIDWISK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLS Y +PMDKSW+VQLLSVAC+SLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSEYRMPMDKSWSVQLLSVACMSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFE+KTIQRMELLVLSRLKWKM+AITPFSFIDYFL+ ITVE H
Sbjct: 181 ---------LQVEEPKFVFESKTIQRMELLVLSRLKWKMRAITPFSFIDYFLTNITVEPH 240

Query: 241 IPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300
            P  S  KSSQLILSTIKGIDFLEF+PSEIALAVA+S+SG  QA D+NKAIL+FPYMEKE
Sbjct: 241 EPRLSLFKSSQLILSTIKGIDFLEFKPSEIALAVAMSVSGVVQAADINKAILAFPYMEKE 300

Query: 301 RVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGNS 360
           RVMKCIELIRD SLI+NVY       VGGSVPQSP+GVLDAACLSYKTEE L AGSCGN 
Sbjct: 301 RVMKCIELIRDFSLISNVY------GVGGSVPQSPIGVLDAACLSYKTEE-LKAGSCGN- 330

Query: 361 SSSSSHDSPDSKRRRQDRP 380
            SSSSHDSPDSKRRR DRP
Sbjct: 361 FSSSSHDSPDSKRRRLDRP 330

[Close]

BLAST of Lsi01G008020 vs. NCBI nr
Match: XP_038883179.1 (cyclin-D4-1-like [Benincasa hispida])

HSP 1 Score: 632.5 bits (1630), Expect = 2.4e-177
Identity = 341/393 (86.77%), Postives = 347/393 (88.30%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTENANICFDDQFDCNATNN FE+CSISLP+RRTRD  V     ETFLGSALES
Sbjct: 1   MADSFYCTENANICFDDQFDCNATNNVFEQCSISLPHRRTRDQYV-----ETFLGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV RMVEKEIEHLPTHDYLKRMLSGDLD KFR+EAVDWIWK      AHAHYSFGPLS
Sbjct: 61  EERVRRMVEKEIEHLPTHDYLKRMLSGDLDFKFRKEAVDWIWK------AHAHYSFGPLS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH
Sbjct: 181 ---------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240

Query: 241 IPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300
           IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISISGEFQAPDMNKAILSFPYMEKE
Sbjct: 241 IPSLFFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300

Query: 301 RVMKCIELIRDLSLINNVYENSMAGN-VGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           RVMKCIELIRDLSLINNVY N + GN VGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN
Sbjct: 301 RVMKCIELIRDLSLINNVYGNELDGNVVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 359

Query: 361 SSSSSSHDSPDSKRRRQDRPSSNDDSSPSSPVK 393
              SSSHDS DSKRRRQDRPSSNDDSSPSSPVK
Sbjct: 361 ---SSSHDSADSKRRRQDRPSSNDDSSPSSPVK 359

[Close]

BLAST of Lsi01G008020 vs. NCBI nr
Match: XP_004143552.1 (cyclin-D4-1 [Cucumis sativus] >KGN48716.1 hypothetical protein Csa_004117 [Cucumis sativus])

HSP 1 Score: 590.5 bits (1521), Expect = 1.1e-164
Identity = 330/399 (82.71%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPN-RRTRDPNVDCVGSETFLGSA- 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+ RRTRDPNV+  GSE FLGS+ 
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSV 60

Query: 61  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 120
           LESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFG
Sbjct: 61  LESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFG 120

Query: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 180
           PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID        
Sbjct: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID-------- 180

Query: 181 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 240
                       LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+V
Sbjct: 181 ------------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISV 240

Query: 241 E-QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 300
           E Q+IP+  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPY
Sbjct: 241 EQQNIPNLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPY 300

Query: 301 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 360
           MEKERVMKCI+LIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS
Sbjct: 301 MEKERVMKCIDLIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGS 360

Query: 361 C--GNSSSSSSHDSPDSKRRRQDRPSSNDD-SSPSSPVK 393
           C  GNSSSSSSHDS DSKRRRQDRPSSNDD +SPSSPVK
Sbjct: 361 CGNGNSSSSSSHDSQDSKRRRQDRPSSNDDNTSPSSPVK 366

[Close]

BLAST of Lsi01G008020 vs. NCBI nr
Match: XP_008440562.1 (PREDICTED: cyclin-D4-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 590.1 bits (1520), Expect = 1.4e-164
Identity = 330/401 (82.29%), Postives = 343/401 (85.54%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPNRRTRDPNVDCVGSETFLGSA-L 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+RRTR+PNV+  GSE FLGS+ L
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRTREPNVEFFGSENFLGSSVL 60

Query: 61  ESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGP 120
           ESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGP
Sbjct: 61  ESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGP 120

Query: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNL 180
           LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID         
Sbjct: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID--------- 180

Query: 181 LSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE 240
                      LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE
Sbjct: 181 -----------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVE 240

Query: 241 -QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYM 300
            Q+IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYM
Sbjct: 241 QQNIPSFYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYM 300

Query: 301 EKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSC 360
           EKERVMKCIELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS 
Sbjct: 301 EKERVMKCIELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSY 360

Query: 361 GN-----SSSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           GN     SSSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 361 GNGNSSSSSSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 368

[Close]

BLAST of Lsi01G008020 vs. NCBI nr
Match: XP_022132453.1 (cyclin-D4-1-like [Momordica charantia])

HSP 1 Score: 540.8 bits (1392), Expect = 9.7e-150
Identity = 301/392 (76.79%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTEN N CFD+  +C+ATN EF           +++P+VDC   ET +GSALES
Sbjct: 1   MADSFYCTENTNSCFDEFDNCDATNYEF----------GSQNPSVDC---ETLMGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV  +VEKEIEHLP +DYLKRM SGDLDLKFRREAVDWIWK      AHAHYSFG LS
Sbjct: 61  EERVRALVEKEIEHLPRNDYLKRMRSGDLDLKFRREAVDWIWK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEA+TIQRMELLVLSRLKWKMQAITP SFIDYFL  ITV QH
Sbjct: 181 ---------LQVEEPKFVFEARTIQRMELLVLSRLKWKMQAITPLSFIDYFLRNITVGQH 240

Query: 241 IPSTS-FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEK 300
           +PS S   KS+QLILSTIKGIDFLEFRPSEIALAVAISISGE QAPD++KAILSFPYMEK
Sbjct: 241 VPSLSLLLKSAQLILSTIKGIDFLEFRPSEIALAVAISISGELQAPDIDKAILSFPYMEK 300

Query: 301 ERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           ERVMKCIELI+DLSLINNVY NS+ G  GGS+PQSPVGVLDAAC SYKTEE LTAGSCGN
Sbjct: 301 ERVMKCIELIKDLSLINNVYGNSLGGGGGGSIPQSPVGVLDAACFSYKTEE-LTAGSCGN 352

Query: 361 SSSS---SSHDSPDSKRRRQDRPSSNDDSSPS 389
           SSSS   SSHDSPDSKRRRQDRPS   DS+PS
Sbjct: 361 SSSSSSFSSHDSPDSKRRRQDRPSPKVDSNPS 352

[Close]

BLAST of Lsi01G008020 vs. NCBI nr
Match: KAA0036334.1 (cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa] >TYK12728.1 cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.8 bits (1296), Expect = 1.3e-138
Identity = 280/333 (84.08%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 67  MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMN 126
           MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGPLSLCLSMN
Sbjct: 1   MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGPLSLCLSMN 60

Query: 127 YLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDF 186
           YLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID                 
Sbjct: 61  YLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------------- 120

Query: 187 NFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE-QHIPSTS 246
              LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE Q+IPS  
Sbjct: 121 ---LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSFY 180

Query: 247 FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKC 306
           FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYMEKERVMKC
Sbjct: 181 FSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERVMKC 240

Query: 307 IELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN-----S 366
           IELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS GN     S
Sbjct: 241 IELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSYGNGNSSSS 300

Query: 367 SSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           SSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 301 SSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 307

[Close]

BLAST of Lsi01G008020 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 285.0 bits (728), Expect = 8.9e-77
Identity = 171/348 (49.14%), Postives = 228/348 (65.52%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVG----GSVP 340
           SISGE +  D  KA+ S  Y+++ERV +C+ L+R L+   NV   S++         +VP
Sbjct: 282 SISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVP 341

Query: 341 QSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
            SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 ASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 360

[Close]

BLAST of Lsi01G008020 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-75
Identity = 171/349 (49.00%), Postives = 228/349 (65.33%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYM-EKERVMKCIELIRDLSLINNVYENSMAGNVG----GSV 340
           SISGE +  D  KA+ S  Y+ ++ERV +C+ L+R L+   NV   S++         +V
Sbjct: 282 SISGETECIDEEKALSSLIYVKQQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAV 341

Query: 341 PQSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
           P SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 PASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 361

[Close]

BLAST of Lsi01G008020 vs. TAIR 10
Match: AT5G65420.3 (CYCLIN D4;1 )

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-66
Identity = 155/321 (48.29%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK----CGVMKQA 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK    C   ++A
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREA 98

Query: 116 HAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDL 175
              + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID 
Sbjct: 99  CEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID- 158

Query: 176 QLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDY 235
                              LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I Y
Sbjct: 159 -------------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRY 218

Query: 236 FLSKIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNK 295
           FL K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + 
Sbjct: 219 FLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDN 278

Query: 296 AILS--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLS 355
           +  S  F  ++KERV K  E+I                +      Q+P GVL+  A C S
Sbjct: 279 SSFSPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFS 316

Query: 356 YKTEELLTAGSCGNSSSSSSH 367
           +KT +         SSSS +H
Sbjct: 339 FKTHD---------SSSSYTH 316

[Close]

BLAST of Lsi01G008020 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-65
Identity = 155/318 (48.74%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK-CGVMKQAHAH 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK C V       
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEV------- 98

Query: 116 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 175
           + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID    
Sbjct: 99  HQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID---- 158

Query: 176 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 235
                           LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I YFL 
Sbjct: 159 ----------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLR 218

Query: 236 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 295
           K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + +  
Sbjct: 219 KMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF 278

Query: 296 S--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLSYKT 355
           S  F  ++KERV K  E+I                +      Q+P GVL+  A C S+KT
Sbjct: 279 SPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFSFKT 306

Query: 356 EELLTAGSCGNSSSSSSH 367
            +         SSSS +H
Sbjct: 339 HD---------SSSSYTH 306

[Close]

BLAST of Lsi01G008020 vs. TAIR 10
Match: AT5G10440.1 (cyclin d4;2 )

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-60
Identity = 136/257 (52.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 54  LGSALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAH 113
           +G  LESEE V  M+EKE +H P  DYLKR+ +GDLD   R +A+ WIWK      A   
Sbjct: 29  MGFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWK------ACEE 88

Query: 114 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 173
             FGPL +CL+MNYLDRFLSV+ LP  K+WTVQLL+VAC+SLAAK+EET VP     +L+
Sbjct: 89  LQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVP-----ELM 148

Query: 174 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 233
                          +LQV  P FVFEAK++QRMELLVL+ L+W+++A+TP S++ YFLS
Sbjct: 149 ---------------QLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLS 208

Query: 234 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 293
           KI   +Q   S   ++S Q+I ST KGIDFLEFR SEIA AVA+S+SGE    D      
Sbjct: 209 KINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGEHF--DKFSFSS 257

Query: 294 SFPYMEKERVMKCIELI 310
           SF  +EKERV K  E+I
Sbjct: 269 SFSSLEKERVKKIGEMI 257

The following BLAST results are available for this feature:

BLAST of Lsi01G008020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42752	1.3e-75	49.14	Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3	[more]
Q6YXH8	9.6e-68	46.47	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
Q8LGA1	2.9e-64	48.74	Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2	[more]
Q8LHA8	2.3e-61	44.41	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]
Q4KYM5	2.5e-60	43.41	Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2	[more]

BLAST of Lsi01G008020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT3	5.2e-165	82.71	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G499110 PE=3 SV=1	[more]
A0A1S3B257	6.7e-165	82.29	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103484941 PE=3 SV=1	[more]
A0A6J1BWA4	4.7e-150	76.79	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005305 PE=3 SV=1	[more]
A0A5D3CNJ1	6.4e-139	84.08	B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003160...	[more]
A0A6J1KS57	2.3e-133	70.71	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111497143 PE=3 SV=1	[more]

BLAST of Lsi01G008020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883179.1	2.4e-177	86.77	cyclin-D4-1-like [Benincasa hispida]	[more]
XP_004143552.1	1.1e-164	82.71	cyclin-D4-1 [Cucumis sativus] >KGN48716.1 hypothetical protein Csa_004117 [Cucum...	[more]
XP_008440562.1	1.4e-164	82.29	PREDICTED: cyclin-D4-1-like isoform X1 [Cucumis melo]	[more]
XP_022132453.1	9.7e-150	76.79	cyclin-D4-1-like [Momordica charantia]	[more]
KAA0036334.1	1.3e-138	84.08	cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa] >TYK12728.1 cyclin-D4-1-l...	[more]

BLAST of Lsi01G008020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22490.1	8.9e-77	49.14	Cyclin D2;1	[more]
AT2G22490.2	1.7e-75	49.00	Cyclin D2;1	[more]
AT5G65420.3	1.1e-66	48.29	CYCLIN D4;1	[more]
AT5G65420.1	2.1e-65	48.74	CYCLIN D4;1	[more]
AT5G10440.1	2.6e-60	52.92	cyclin d4;2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 105..213 e-value: 2.1E-12 score: 57.2
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 94..212 e-value: 1.22234E-11 score: 58.404
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 222..333 e-value: 4.8E-4 score: 29.5
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 222..315 e-value: 4.7E-12 score: 46.1
None	No IPR available	GENE3D	1.10.472.10		coord: 66..307 e-value: 4.7E-38 score: 132.7
None	No IPR available	GENE3D	1.10.472.10		coord: 77..220 e-value: 4.7E-38 score: 132.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..381
None	No IPR available	PANTHER	PTHR10177:SF479	CYCLIN-D4-1-LIKE	coord: 48..170 coord: 189..378
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 67..219 e-value: 2.3E-23 score: 82.3
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 189..378
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 48..170
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 60..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G008020.1	Lsi01G008020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity