Lsi01G008020.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G008020.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B-like cyclin
Location	chr01: 6327312 .. 6333259 (-)
Sequence length	2482
RNA-Seq Expression	Lsi01G008020.1
Synteny	Lsi01G008020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTAAGAAACATCAAATGCTGTTTTTATTTGTTTGATATTTCTTCTTTAGATTTAGAAACATCCTTCAATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGGTTGGTTTTTTGCTTTCTTTTTCTGTTTTTTACACTCTGATGATGGAAATGCCTGGTTTTTGGTTACCTTTATCTCTTTTTGATTCATTTCCAAAGAGGGGTTTTGATTTTTCTAAGGTCTTTTCCATCAATGGAAGTTTGAGTTCTTATCAAAAACAGGAATTTGGTCTCCCTAACCTTTTTCCTACTCATCTTCTCATTACTCTTCTTCTTTTCTTTTTGTTTGGTTTGATTATTCATAATGATGGGGTCTGTTTTTTTTGCTTTTCTTTTCTCAATTTCAACAGTTTTATGGTCCCTCAGTACTTATAATTCCATTGTGTGTCATCCTGTTAATCTTAGTTAGTTCATTATTTGATTCAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTGTAAGTTCCAAAAATCAAACAAGATTTTTCTTTTTTCTCTTTCCATATTTCTTGTCATGTAATAAAAATTTTCTTATATGTTTTATTATTTAGATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGGTCAAATGAATTTGAAAATTATTATTATTTATTTTCTGATTAAAAGGGGATAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGTGTTTTAAAGCTTGTTCTTTCCATTTACTGCCTGAAAAAATCAGTAGCATTCCCCAGAAATTAATGTGTTTGATACAGTTTTGTGGTTGGGAAAAATTAAATGCATGCAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGTAATACAAAAAGAACTTTGCTTTAACTCTTTTTTTCCCCCTTAAAAAAACACATTTTTGCTTATTTTAAACATTTGCTTTATGGGTTGGTTTTGCAGGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGAAAGAAAACACACAAAAGAGAGAAGGAAAAAAAAAGAAAAAAAAAGAGGGTGAATAAAATTTAGGTAAGTGGATAAGGAATTAAATCAGAGTGTTATTAGTTAGAGTCTTACTGAAAATGAAATTTTCCACAACATTTCATATTCACAAGTTTGAGATAGATAGAGTTAGAGTGAAAGAGAGAAAAAACACAGCAAAAAAACAGGAAACTGTTGCTCCAATTCCTGAATTCACTTTTGTAAACAGAATTTTACTGTAAAAGAAGGAAGCAGTAATAAAAAGAAGCAGAGGAAGAAGAATATGAATATGAAAGAGAGGAGGAGATGAGTGCTGTGGTGTGTGTGTTTTTGCAGTGAGTTTTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTGGATTTATTTTCCTTAGGGGTTTTAAATAATTGAATTATTGTATGGCAGTGTGGTGGAAGGGGGAAGGAGAGCAGGGCAGAGCAGAACAGAGCAGTGGAATTATATTATGTGTTTGTTTTTGGGGATTGAGAAAGAGGGTCCCACTTGGTCAAACTTATCTGTGTTTTTGAGTGTATGACCAGTCAACATCTGGGATGGATTGCTCTGTAAAACCAACTCTGTATCTGTATGTATATAATGATTATTCAAAAACAAAGGAAAAGAAAAAACATTGGAAGTATTGCAAAATTTGCACTGAATTTTATTTTTCCTTCAAGTGCACAAAAACAGAGGAGAGGTAGAGGTTTCAGCTGGCATTGCCATTTGTGAAGGGGAAGAAGCCATGAATTTTCTTGAAGGACATTTAATGAAGAAATTGTGTGCATTTTTGAGTCACTAAGTTTTGTGGGAGGCAGGGTTTGGGTTGCCATGGTTGTCACTGACAAGCATCCACTTAAAAACATTGGCTTTGCAACAGACATTAAAGAACAATAAAGTTTCCTTAAACGACAGCTAAGCATGGTCAAGTCTCAAATGTTGTAAGTATCCACTTGAATTCACTCGTCCTTTCGAATATTTCTGTTTCTATCAAATAATTCAATTTCCATCTCTTACGTATACATAATACCAGCTTCAATCTCATTTTTATTATATGTATATTATTATGTGTTTGTATCTAAGGTTTGGATAAAATATTACAAGAGTAACAAATCTCACTTTCAAAAAATTGATGAACTCCAAGTCCTATAAACGTAAAAATGGTGTAAGTGGTGAAAAAGAACGATCTTACAATTTCGATTGAATAGAGAATTCCACGCGATTGTAATAATTTTTCACAC

mRNA sequence

TTTCTTAAGAAATTTGTTTGATATTTCTTCTTTAGATTTAGAAACATCCTTCAATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGAAAGAAAACACACAAAAGAGAGAAGGAAAAAAAAAGAAAAAAAAAGAGGGTGAATAAAATTTAGGTAAGTGGATAAGGAATTAAATCAGAGTGTTATTAGTTAGAGTCTTACTGAAAATGAAATTTTCCACAACATTTCATATTCACAAGTTTGAGATAGATAGAGTTAGAGTGAAAGAGAGAAAAAACACAGCAAAAAAACAGGAAACTGTTGCTCCAATTCCTGAATTCACTTTTGTAAACAGAATTTTACTGTAAAAGAAGGAAGCAGTAATAAAAAGAAGCAGAGGAAGAAGAATATGAATATGAAAGAGAGGAGGAGATGAGTGCTGTGGTGTGTGTGTTTTTGCAGTGAGTTTTTTTTTTTTTTTTGGATTTATTTTCCTTAGGGGTTTTAAATAATTGAATTATTGTATGGCAGTGTGGTGGAAGGGGGAAGGAGAGCAGGGCAGAGCAGAACAGAGCAGTGGAATTATATTATGTGTTTGTTTTTGGGGATTGAGAAAGAGGGTCCCACTTGGTCAAACTTATCTGTGTTTTTGAGTGTATGACCAGTCAACATCTGGGATGGATTGCTCTGTAAAACCAACTCTGTATCTGTATGTATATAATGATTATTCAAAAACAAAGGAAAAGAAAAAACATTGGAAGTATTGCAAAATTTGCACTGAATTTTATTTTTCCTTCAAGTGCACAAAAACAGAGGAGAGGTAGAGGTTTCAGCTGGCATTGCCATTTGTGAAGGGGAAGAAGCCATGAATTTTCTTGAAGGACATTTAATGAAGAAATTGTGTGCATTTTTGAGTCACTAAGTTTTGTGGGAGGCAGGGTTTGGGTTGCCATGGTTGTCACTGACAAGCATCCACTTAAAAACATTGGCTTTGCAACAGACATTAAAGAACAATAAAGTTTCCTTAAACGACAGCTAAGCATGGTCAAGTCTCAAATGTTGTAAGTATCCACTTGAATTCACTCGTCCTTTCGAATATTTCTGTTTCTATCAAATAATTCAATTTCCATCTCTTACGTATACATAATACCAGCTTCAATCTCATTTTTATTATATGTATATTATTATGTGTTTGTATCTAAGGTTTGGATAAAATATTACAAGAGTAACAAATCTCACTTTCAAAAAATTGATGAACTCCAAGTCCTATAAACGTAAAAATGGTGTAAGTGGTGAAAAAGAACGATCTTACAATTTCGATTGAATAGAGAATTCCACGCGATTGTAATAATTTTTCACAC

Coding sequence (CDS)

ATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGATCAATTTGATTGTAATGCTACAAATAATGAGTTTGAGCGATGCTCAATTTCACTGCCCAACCGAAGAACCCGTGACCCGAATGTTGACTGTGTCGGATCCGAGACTTTTCTGGGCTCTGCTTTAGAGAGTGAAGAGAGAGTTGGAAGAATGGTTGAGAAAGAGATTGAGCATTTACCCACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGGAGAGAGGCTGTTGATTGGATTTGGAAGTGTGGTGTGATGAAACAGGCTCATGCCCATTACAGCTTTGGACCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTGCAGCTCCTGTCAGTAGCTTGTGTGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTGCCTCTTCCCATAGATTTACAGTTAGTTAGCTTCTTCAATCTTCTATCTGTTTTGTTGATGGATTTCAATTTTGAACTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTTTAGTTTTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGAGCAGCACATACCAAGTACATCCTTCTCAAAATCTTCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAGGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGGAGAATTTCAAGCACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGAACTGATTAGAGATTTGTCATTGATTAATAATGTGTATGAAAATTCAATGGCTGGTAATGTTGGTGGTTCAGTTCCTCAGAGCCCAGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAAGAATTATTAACTGCAGGCTCATGTGGTAATTCTTCGTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATTCAAGTCCATCCAGTCCTGTCAAATGA

Protein sequence

MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGNSSSSSSHDSPDSKRRRQDRPSSNDDSSPSSPVK

Homology

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BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot
Match: P42752 (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-75
Identity = 171/348 (49.14%), Postives = 228/348 (65.52%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVG----GSVP 340
           SISGE +  D  KA+ S  Y+++ERV +C+ L+R L+   NV   S++         +VP
Sbjct: 282 SISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVP 341

Query: 341 QSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
            SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 ASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 360

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BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 9.6e-68
Identity = 158/340 (46.47%), Postives = 209/340 (61.47%), Query Frame = 0


Query: 43  PNVDCVGSETFLGSALESEERVGRMVEKEIEHLPTHDYLKRMLS----GDLDLKFRREAV 102
           P VD  G    +  A+ SEE V R+VE E +H+P  DY +R+ +    GDLDL+ R +A+
Sbjct: 52  PCVDVAG----VDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAI 111

Query: 103 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 162
           DWIWK       H++YSF PL+ CL++NYLDRFLS+Y LP  K W  QLL+VAC+SLAAK
Sbjct: 112 DWIWK------VHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAK 171

Query: 163 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 222
           MEET+VP  +D                    LQV E ++VFEAKTIQRMELLVLS LKW+
Sbjct: 172 MEETDVPQSLD--------------------LQVGEERYVFEAKTIQRMELLVLSTLKWR 231

Query: 223 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISI 282
           MQA+TPFS++DYFL ++         S   SS+LIL   +G + L FRPSEIA AVA ++
Sbjct: 232 MQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIARGTECLGFRPSEIAAAVAAAV 291

Query: 283 SGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGV 342
            GE  A        +F ++ KER+  C E+I+ + LI+    +     V  S+P+SP GV
Sbjct: 292 VGEEHA--------AFSHVNKERMSHCQEVIQAMELIHPKPSSPSRVFVSSSIPRSPTGV 351

Query: 343 LDAA-CLSYKTEELLTAGSCGNSSSSSSHD-SPDSKRRRQ 377
           LDAA CLSY++++   A     SS    HD SP S +RR+
Sbjct: 352 LDAAGCLSYRSDDSAVASHYAASSWGYEHDSSPVSSKRRK 353

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BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot
Match: Q8LGA1 (Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-64
Identity = 155/318 (48.74%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK-CGVMKQAHAH 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK C V       
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEV------- 98

Query: 116 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 175
           + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID    
Sbjct: 99  HQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID---- 158

Query: 176 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 235
                           LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I YFL 
Sbjct: 159 ----------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLR 218

Query: 236 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 295
           K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + +  
Sbjct: 219 KMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF 278

Query: 296 S--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLSYKT 355
           S  F  ++KERV K  E+I                +      Q+P GVL+  A C S+KT
Sbjct: 279 SPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFSFKT 306

Query: 356 EELLTAGSCGNSSSSSSH 367
            +         SSSS +H
Sbjct: 339 HD---------SSSSYTH 306

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot
Match: Q8LHA8 (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.3e-61
Identity = 143/322 (44.41%), Postives = 202/322 (62.73%), Query Frame = 0


Query: 58  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 117
           ++S+E V  +VEKE++H P   YL+++  G L+  +R++A+DWI K       H++Y+FG
Sbjct: 59  IDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICK------VHSYYNFG 118

Query: 118 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 177
           PLSL L++NYLDRFLS ++LP D+SW  QLLSV+C+SLA KMEET VPLP+D        
Sbjct: 119 PLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMD-------- 178

Query: 178 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 237
                       LQV + ++VFEA+ I+RMEL+V+  LKW++QA+TPFSFI YFL K   
Sbjct: 179 ------------LQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNE 238

Query: 238 EQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAI-LSFPY 297
            +    T  S  S L + T+K   FL FRPSEIA AV +++  E Q    N A+  S   
Sbjct: 239 GKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIP 298

Query: 298 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 357
           + KE VM+C EL+ + +L+  +  NS   N   SVP SP+ VLDAAC S+++++     S
Sbjct: 299 VNKEMVMRCYELMVEKALVKKI-RNS---NASSSVPHSPITVLDAACFSFRSDDTTLGSS 350

Query: 358 CGNSSS---SSSHDSPDSKRRR 376
             NS++   +S   +P SKRRR
Sbjct: 359 QSNSNNKDYNSQDSAPASKRRR 350

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-60
Identity = 145/334 (43.41%), Postives = 196/334 (58.68%), Query Frame = 0


Query: 59  ESEERVGRMVEKEIEHLPTHDYLKRML--SGDLDLKFRREAVDWIWKCGVMKQAHAHYSF 118
           +SEE V  +VE+E  H+P  DY +R+    GD+DL+ R EA+ WIW      + + +Y+F
Sbjct: 73  QSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIW------EVYTYYNF 132

Query: 119 GPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFF 178
             ++  L++NYLDRFLS Y LP  + W  QLLSVAC+S+AAKMEET VP  +D       
Sbjct: 133 SSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLD------- 192

Query: 179 NLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKIT 238
                        LQ+ EP+F+FE +TI RMELLVL+ L W+MQA+TPFS+IDYFL K+ 
Sbjct: 193 -------------LQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLN 252

Query: 239 VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 298
                P +   +SS+LIL    G  FLEFRPSEIA AVA +++GE           +F +
Sbjct: 253 SGNAAPRSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFTH 312

Query: 299 MEKERVMKCIELIRD----LSLINNVY------ENSMAGNVGGSVPQSPVGVLDAACLSY 358
           ++K RV++C E I+D    ++ IN V           A     SVP+SPV VLDA CLSY
Sbjct: 313 VDKGRVLQCQEAIQDHHYSMATINTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSY 372

Query: 359 KTE--ELLTAGSCGNSSSSSSHDSP--DSKRRRQ 377
           K++  +  T  S G     S  DS    SK+RR+
Sbjct: 373 KSDDTDAATIASHGGGRRKSCFDSSPVTSKKRRK 380

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL
Match: A0A0A0KLT3 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G499110 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.2e-165
Identity = 330/399 (82.71%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPN-RRTRDPNVDCVGSETFLGSA- 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+ RRTRDPNV+  GSE FLGS+ 
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSV 60

Query: 61  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 120
           LESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFG
Sbjct: 61  LESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFG 120

Query: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 180
           PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID        
Sbjct: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID-------- 180

Query: 181 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 240
                       LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+V
Sbjct: 181 ------------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISV 240

Query: 241 E-QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 300
           E Q+IP+  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPY
Sbjct: 241 EQQNIPNLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPY 300

Query: 301 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 360
           MEKERVMKCI+LIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS
Sbjct: 301 MEKERVMKCIDLIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGS 360

Query: 361 C--GNSSSSSSHDSPDSKRRRQDRPSSNDD-SSPSSPVK 393
           C  GNSSSSSSHDS DSKRRRQDRPSSNDD +SPSSPVK
Sbjct: 361 CGNGNSSSSSSHDSQDSKRRRQDRPSSNDDNTSPSSPVK 366

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL
Match: A0A1S3B257 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103484941 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 6.7e-165
Identity = 330/401 (82.29%), Postives = 343/401 (85.54%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPNRRTRDPNVDCVGSETFLGSA-L 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+RRTR+PNV+  GSE FLGS+ L
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRTREPNVEFFGSENFLGSSVL 60

Query: 61  ESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGP 120
           ESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGP
Sbjct: 61  ESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGP 120

Query: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNL 180
           LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID         
Sbjct: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID--------- 180

Query: 181 LSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE 240
                      LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE
Sbjct: 181 -----------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVE 240

Query: 241 -QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYM 300
            Q+IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYM
Sbjct: 241 QQNIPSFYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYM 300

Query: 301 EKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSC 360
           EKERVMKCIELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS 
Sbjct: 301 EKERVMKCIELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSY 360

Query: 361 GN-----SSSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           GN     SSSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 361 GNGNSSSSSSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 368

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL
Match: A0A6J1BWA4 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005305 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.7e-150
Identity = 301/392 (76.79%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTEN N CFD+  +C+ATN EF           +++P+VDC   ET +GSALES
Sbjct: 1   MADSFYCTENTNSCFDEFDNCDATNYEF----------GSQNPSVDC---ETLMGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV  +VEKEIEHLP +DYLKRM SGDLDLKFRREAVDWIWK      AHAHYSFG LS
Sbjct: 61  EERVRALVEKEIEHLPRNDYLKRMRSGDLDLKFRREAVDWIWK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEA+TIQRMELLVLSRLKWKMQAITP SFIDYFL  ITV QH
Sbjct: 181 ---------LQVEEPKFVFEARTIQRMELLVLSRLKWKMQAITPLSFIDYFLRNITVGQH 240

Query: 241 IPSTS-FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEK 300
           +PS S   KS+QLILSTIKGIDFLEFRPSEIALAVAISISGE QAPD++KAILSFPYMEK
Sbjct: 241 VPSLSLLLKSAQLILSTIKGIDFLEFRPSEIALAVAISISGELQAPDIDKAILSFPYMEK 300

Query: 301 ERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           ERVMKCIELI+DLSLINNVY NS+ G  GGS+PQSPVGVLDAAC SYKTEE LTAGSCGN
Sbjct: 301 ERVMKCIELIKDLSLINNVYGNSLGGGGGGSIPQSPVGVLDAACFSYKTEE-LTAGSCGN 352

Query: 361 SSSS---SSHDSPDSKRRRQDRPSSNDDSSPS 389
           SSSS   SSHDSPDSKRRRQDRPS   DS+PS
Sbjct: 361 SSSSSSFSSHDSPDSKRRRQDRPSPKVDSNPS 352

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL
Match: A0A5D3CNJ1 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003160 PE=3 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 6.4e-139
Identity = 280/333 (84.08%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 67  MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMN 126
           MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGPLSLCLSMN
Sbjct: 1   MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGPLSLCLSMN 60

Query: 127 YLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDF 186
           YLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID                 
Sbjct: 61  YLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------------- 120

Query: 187 NFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE-QHIPSTS 246
              LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE Q+IPS  
Sbjct: 121 ---LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSFY 180

Query: 247 FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKC 306
           FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYMEKERVMKC
Sbjct: 181 FSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERVMKC 240

Query: 307 IELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN-----S 366
           IELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS GN     S
Sbjct: 241 IELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSYGNGNSSSS 300

Query: 367 SSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           SSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 301 SSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 307

[Close]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL
Match: A0A6J1KS57 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111497143 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 2.3e-133
Identity = 268/379 (70.71%), Postives = 295/379 (77.84%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTE+ N CF D+ +CNATNNEFER              ++C GS   + SA++S
Sbjct: 1   MADSFYCTESVNTCF-DELECNATNNEFER--------------IECFGSGNSMVSAIQS 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           E+R+  MVE+EI+HLP HDYLKR+  G LD KFRR A+DWI K      AHAHYSFG LS
Sbjct: 61  EQRIREMVEQEIQHLPRHDYLKRLRCGALDSKFRRAAIDWISK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLS Y +PMDKSW+VQLLSVAC+SLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSEYRMPMDKSWSVQLLSVACMSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFE+KTIQRMELLVLSRLKWKM+AITPFSFIDYFL+ ITVE H
Sbjct: 181 ---------LQVEEPKFVFESKTIQRMELLVLSRLKWKMRAITPFSFIDYFLTNITVEPH 240

Query: 241 IPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300
            P  S  KSSQLILSTIKGIDFLEF+PSEIALAVA+S+SG  QA D+NKAIL+FPYMEKE
Sbjct: 241 EPRLSLFKSSQLILSTIKGIDFLEFKPSEIALAVAMSVSGVVQAADINKAILAFPYMEKE 300

Query: 301 RVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGNS 360
           RVMKCIELIRD SLI+NVY       VGGSVPQSP+GVLDAACLSYKTEE L AGSCGN 
Sbjct: 301 RVMKCIELIRDFSLISNVY------GVGGSVPQSPIGVLDAACLSYKTEE-LKAGSCGN- 330

Query: 361 SSSSSHDSPDSKRRRQDRP 380
            SSSSHDSPDSKRRR DRP
Sbjct: 361 FSSSSHDSPDSKRRRLDRP 330

[Close]

BLAST of Lsi01G008020.1 vs. NCBI nr
Match: XP_038883179.1 (cyclin-D4-1-like [Benincasa hispida])

HSP 1 Score: 632.5 bits (1630), Expect = 2.4e-177
Identity = 341/393 (86.77%), Postives = 347/393 (88.30%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTENANICFDDQFDCNATNN FE+CSISLP+RRTRD  V     ETFLGSALES
Sbjct: 1   MADSFYCTENANICFDDQFDCNATNNVFEQCSISLPHRRTRDQYV-----ETFLGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV RMVEKEIEHLPTHDYLKRMLSGDLD KFR+EAVDWIWK      AHAHYSFGPLS
Sbjct: 61  EERVRRMVEKEIEHLPTHDYLKRMLSGDLDFKFRKEAVDWIWK------AHAHYSFGPLS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH
Sbjct: 181 ---------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240

Query: 241 IPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300
           IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISISGEFQAPDMNKAILSFPYMEKE
Sbjct: 241 IPSLFFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISGEFQAPDMNKAILSFPYMEKE 300

Query: 301 RVMKCIELIRDLSLINNVYENSMAGN-VGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           RVMKCIELIRDLSLINNVY N + GN VGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN
Sbjct: 301 RVMKCIELIRDLSLINNVYGNELDGNVVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 359

Query: 361 SSSSSSHDSPDSKRRRQDRPSSNDDSSPSSPVK 393
              SSSHDS DSKRRRQDRPSSNDDSSPSSPVK
Sbjct: 361 ---SSSHDSADSKRRRQDRPSSNDDSSPSSPVK 359

[Close]

BLAST of Lsi01G008020.1 vs. NCBI nr
Match: XP_004143552.1 (cyclin-D4-1 [Cucumis sativus] >KGN48716.1 hypothetical protein Csa_004117 [Cucumis sativus])

HSP 1 Score: 590.5 bits (1521), Expect = 1.1e-164
Identity = 330/399 (82.71%), Postives = 344/399 (86.22%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPN-RRTRDPNVDCVGSETFLGSA- 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+ RRTRDPNV+  GSE FLGS+ 
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSV 60

Query: 61  LESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFG 120
           LESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFG
Sbjct: 61  LESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFG 120

Query: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFN 180
           PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID        
Sbjct: 121 PLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID-------- 180

Query: 181 LLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITV 240
                       LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+V
Sbjct: 181 ------------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISV 240

Query: 241 E-QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPY 300
           E Q+IP+  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPY
Sbjct: 241 EQQNIPNLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPY 300

Query: 301 MEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGS 360
           MEKERVMKCI+LIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS
Sbjct: 301 MEKERVMKCIDLIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGS 360

Query: 361 C--GNSSSSSSHDSPDSKRRRQDRPSSNDD-SSPSSPVK 393
           C  GNSSSSSSHDS DSKRRRQDRPSSNDD +SPSSPVK
Sbjct: 361 CGNGNSSSSSSHDSQDSKRRRQDRPSSNDDNTSPSSPVK 366

[Close]

BLAST of Lsi01G008020.1 vs. NCBI nr
Match: XP_008440562.1 (PREDICTED: cyclin-D4-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 590.1 bits (1520), Expect = 1.4e-164
Identity = 330/401 (82.29%), Postives = 343/401 (85.54%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEF-ERCSISLPNRRTRDPNVDCVGSETFLGSA-L 60
           MADSFYCTENANICFD+       NNEF ERCSISLP+RRTR+PNV+  GSE FLGS+ L
Sbjct: 1   MADSFYCTENANICFDE-------NNEFDERCSISLPHRRTREPNVEFFGSENFLGSSVL 60

Query: 61  ESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGP 120
           ESEERV RMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGP
Sbjct: 61  ESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGP 120

Query: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNL 180
           LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID         
Sbjct: 121 LSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID--------- 180

Query: 181 LSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE 240
                      LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE
Sbjct: 181 -----------LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVE 240

Query: 241 -QHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYM 300
            Q+IPS  FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYM
Sbjct: 241 QQNIPSFYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYM 300

Query: 301 EKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSC 360
           EKERVMKCIELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS 
Sbjct: 301 EKERVMKCIELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSY 360

Query: 361 GN-----SSSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           GN     SSSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 361 GNGNSSSSSSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 368

[Close]

BLAST of Lsi01G008020.1 vs. NCBI nr
Match: XP_022132453.1 (cyclin-D4-1-like [Momordica charantia])

HSP 1 Score: 540.8 bits (1392), Expect = 9.7e-150
Identity = 301/392 (76.79%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   MADSFYCTENANICFDDQFDCNATNNEFERCSISLPNRRTRDPNVDCVGSETFLGSALES 60
           MADSFYCTEN N CFD+  +C+ATN EF           +++P+VDC   ET +GSALES
Sbjct: 1   MADSFYCTENTNSCFDEFDNCDATNYEF----------GSQNPSVDC---ETLMGSALES 60

Query: 61  EERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLS 120
           EERV  +VEKEIEHLP +DYLKRM SGDLDLKFRREAVDWIWK      AHAHYSFG LS
Sbjct: 61  EERVRALVEKEIEHLPRNDYLKRMRSGDLDLKFRREAVDWIWK------AHAHYSFGALS 120

Query: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLS 180
           LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID           
Sbjct: 121 LCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPID----------- 180

Query: 181 VLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQH 240
                    LQVEEPKFVFEA+TIQRMELLVLSRLKWKMQAITP SFIDYFL  ITV QH
Sbjct: 181 ---------LQVEEPKFVFEARTIQRMELLVLSRLKWKMQAITPLSFIDYFLRNITVGQH 240

Query: 241 IPSTS-FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEK 300
           +PS S   KS+QLILSTIKGIDFLEFRPSEIALAVAISISGE QAPD++KAILSFPYMEK
Sbjct: 241 VPSLSLLLKSAQLILSTIKGIDFLEFRPSEIALAVAISISGELQAPDIDKAILSFPYMEK 300

Query: 301 ERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN 360
           ERVMKCIELI+DLSLINNVY NS+ G  GGS+PQSPVGVLDAAC SYKTEE LTAGSCGN
Sbjct: 301 ERVMKCIELIKDLSLINNVYGNSLGGGGGGSIPQSPVGVLDAACFSYKTEE-LTAGSCGN 352

Query: 361 SSSS---SSHDSPDSKRRRQDRPSSNDDSSPS 389
           SSSS   SSHDSPDSKRRRQDRPS   DS+PS
Sbjct: 361 SSSSSSFSSHDSPDSKRRRQDRPSPKVDSNPS 352

[Close]

BLAST of Lsi01G008020.1 vs. NCBI nr
Match: KAA0036334.1 (cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa] >TYK12728.1 cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.8 bits (1296), Expect = 1.3e-138
Identity = 280/333 (84.08%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 67  MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAHYSFGPLSLCLSMN 126
           MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK      AHAHYSFGPLSLCLSMN
Sbjct: 1   MVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWK------AHAHYSFGPLSLCLSMN 60

Query: 127 YLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLVSFFNLLSVLLMDF 186
           YLDRFLSVYHLPMDKSWTVQLLSVAC+SLAAKMEETEVPLPID                 
Sbjct: 61  YLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPID----------------- 120

Query: 187 NFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVE-QHIPSTS 246
              LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKI+VE Q+IPS  
Sbjct: 121 ---LQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSFY 180

Query: 247 FSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAILSFPYMEKERVMKC 306
           FSKSSQLILSTIKGIDFLEF+PSEIALAVAISIS EFQ PDMNKAILSFPYMEKERVMKC
Sbjct: 181 FSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERVMKC 240

Query: 307 IELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLDAACLSYKTEELLTAGSCGN-----S 366
           IELIRD SLI+NVY N++ G   GSVPQSPVGVLDAACLSYKTEELLTAGS GN     S
Sbjct: 241 IELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSYGNGNSSSS 300

Query: 367 SSSSSHDSPDSKRRRQDRPSSN-DDSSPSSPVK 393
           SSSSSHDS DSKRRRQDRPSSN DD+SPSSPVK
Sbjct: 301 SSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 307

[Close]

BLAST of Lsi01G008020.1 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 285.0 bits (728), Expect = 8.9e-77
Identity = 171/348 (49.14%), Postives = 228/348 (65.52%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYMEKERVMKCIELIRDLSLINNVYENSMAGNVG----GSVP 340
           SISGE +  D  KA+ S  Y+++ERV +C+ L+R L+   NV   S++         +VP
Sbjct: 282 SISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVP 341

Query: 341 QSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
            SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 ASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 360

[Close]

BLAST of Lsi01G008020.1 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-75
Identity = 171/349 (49.00%), Postives = 228/349 (65.33%), Query Frame = 0


Query: 41  RDPNVDCVGSETFLGSALE--SEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAV 100
           +D N    GS   +GS+    SE+R+  M+ +EIE  P  DY+KR+LSGDLDL  R +A+
Sbjct: 42  KDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQAL 101

Query: 101 DWIWKCGVMKQAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAK 160
           DWI K        AHY FG L +CLSMNYLDRFL+ Y LP DK W  QLL+V+C+SLA+K
Sbjct: 102 DWILK------VCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 161

Query: 161 MEETEVPLPIDLQLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWK 220
           MEET+VP  +D                    LQVE+PKFVFEAKTI+RMELLV++ L W+
Sbjct: 162 MEETDVPHIVD--------------------LQVEDPKFVFEAKTIKRMELLVVTTLNWR 221

Query: 221 MQAITPFSFIDYFLSKITVEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEI--ALAVAI 280
           +QA+TPFSFIDYF+ KI+   H+      +SS+ IL+T K I+FL+FRPSEI  A AV++
Sbjct: 222 LQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSV 281

Query: 281 SISGEFQAPDMNKAILSFPYM-EKERVMKCIELIRDLSLINNVYENSMAGNVG----GSV 340
           SISGE +  D  KA+ S  Y+ ++ERV +C+ L+R L+   NV   S++         +V
Sbjct: 282 SISGETECIDEEKALSSLIYVKQQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAV 341

Query: 341 PQSPVGVLDAACLSYKTEELLTAGSCGNSSSSS----SHDSPDSKRRRQ 377
           P SPVGVL+A CLSY++EE  T  SC NSS SS    ++++  +KRRR+
Sbjct: 342 PASPVGVLEATCLSYRSEE-RTVESCTNSSQSSPDNNNNNNNSNKRRRK 361

[Close]

BLAST of Lsi01G008020.1 vs. TAIR 10
Match: AT5G65420.3 (CYCLIN D4;1 )

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-66
Identity = 155/321 (48.29%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK----CGVMKQA 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK    C   ++A
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREA 98

Query: 116 HAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDL 175
              + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID 
Sbjct: 99  CEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID- 158

Query: 176 QLVSFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDY 235
                              LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I Y
Sbjct: 159 -------------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRY 218

Query: 236 FLSKIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNK 295
           FL K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + 
Sbjct: 219 FLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDN 278

Query: 296 AILS--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLS 355
           +  S  F  ++KERV K  E+I                +      Q+P GVL+  A C S
Sbjct: 279 SSFSPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFS 316

Query: 356 YKTEELLTAGSCGNSSSSSSH 367
           +KT +         SSSS +H
Sbjct: 339 FKTHD---------SSSSYTH 316

[Close]

BLAST of Lsi01G008020.1 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-65
Identity = 155/318 (48.74%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 56  SALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKF-RREAVDWIWK-CGVMKQAHAH 115
           S  ESEE +  MVEKE +HLP+ DY+KR+ SGDLDL   RR+A++WIWK C V       
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEV------- 98

Query: 116 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 175
           + FGPL  CL+MNYLDRFLSV+ LP  K W +QLL+VAC+SLAAK+EETEVP+ ID    
Sbjct: 99  HQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLID---- 158

Query: 176 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 235
                           LQV +P+FVFEAK++QRMELLVL++LKW+++AITP S+I YFL 
Sbjct: 159 ----------------LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLR 218

Query: 236 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 295
           K++  +Q   +T  S+S Q+I ST KGIDFLEFRPSE+A AVA+S+SGE Q    + +  
Sbjct: 219 KMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF 278

Query: 296 S--FPYMEKERVMKCIELIRDLSLINNVYENSMAGNVGGSVPQSPVGVLD--AACLSYKT 355
           S  F  ++KERV K  E+I                +      Q+P GVL+  A C S+KT
Sbjct: 279 SPLFSLLQKERVKKIGEMIE--------------SDGSDLCSQTPNGVLEVSACCFSFKT 306

Query: 356 EELLTAGSCGNSSSSSSH 367
            +         SSSS +H
Sbjct: 339 HD---------SSSSYTH 306

[Close]

BLAST of Lsi01G008020.1 vs. TAIR 10
Match: AT5G10440.1 (cyclin d4;2 )

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-60
Identity = 136/257 (52.92%), Postives = 171/257 (66.54%), Query Frame = 0


Query: 54  LGSALESEERVGRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKCGVMKQAHAH 113
           +G  LESEE V  M+EKE +H P  DYLKR+ +GDLD   R +A+ WIWK      A   
Sbjct: 29  MGFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWK------ACEE 88

Query: 114 YSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQLV 173
             FGPL +CL+MNYLDRFLSV+ LP  K+WTVQLL+VAC+SLAAK+EET VP     +L+
Sbjct: 89  LQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVP-----ELM 148

Query: 174 SFFNLLSVLLMDFNFELQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLS 233
                          +LQV  P FVFEAK++QRMELLVL+ L+W+++A+TP S++ YFLS
Sbjct: 149 ---------------QLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLS 208

Query: 234 KIT-VEQHIPSTSFSKSSQLILSTIKGIDFLEFRPSEIALAVAISISGEFQAPDMNKAIL 293
           KI   +Q   S   ++S Q+I ST KGIDFLEFR SEIA AVA+S+SGE    D      
Sbjct: 209 KINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGEHF--DKFSFSS 257

Query: 294 SFPYMEKERVMKCIELI 310
           SF  +EKERV K  E+I
Sbjct: 269 SFSSLEKERVKKIGEMI 257

The following BLAST results are available for this feature:

BLAST of Lsi01G008020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42752	1.3e-75	49.14	Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3	[more]
Q6YXH8	9.6e-68	46.47	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
Q8LGA1	2.9e-64	48.74	Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2	[more]
Q8LHA8	2.3e-61	44.41	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]
Q4KYM5	2.5e-60	43.41	Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2	[more]

BLAST of Lsi01G008020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT3	5.2e-165	82.71	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G499110 PE=3 SV=1	[more]
A0A1S3B257	6.7e-165	82.29	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103484941 PE=3 SV=1	[more]
A0A6J1BWA4	4.7e-150	76.79	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005305 PE=3 SV=1	[more]
A0A5D3CNJ1	6.4e-139	84.08	B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003160...	[more]
A0A6J1KS57	2.3e-133	70.71	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111497143 PE=3 SV=1	[more]

BLAST of Lsi01G008020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883179.1	2.4e-177	86.77	cyclin-D4-1-like [Benincasa hispida]	[more]
XP_004143552.1	1.1e-164	82.71	cyclin-D4-1 [Cucumis sativus] >KGN48716.1 hypothetical protein Csa_004117 [Cucum...	[more]
XP_008440562.1	1.4e-164	82.29	PREDICTED: cyclin-D4-1-like isoform X1 [Cucumis melo]	[more]
XP_022132453.1	9.7e-150	76.79	cyclin-D4-1-like [Momordica charantia]	[more]
KAA0036334.1	1.3e-138	84.08	cyclin-D4-1-like isoform X1 [Cucumis melo var. makuwa] >TYK12728.1 cyclin-D4-1-l...	[more]

BLAST of Lsi01G008020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22490.1	8.9e-77	49.14	Cyclin D2;1	[more]
AT2G22490.2	1.7e-75	49.00	Cyclin D2;1	[more]
AT5G65420.3	1.1e-66	48.29	CYCLIN D4;1	[more]
AT5G65420.1	2.1e-65	48.74	CYCLIN D4;1	[more]
AT5G10440.1	2.6e-60	52.92	cyclin d4;2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 105..213 e-value: 2.1E-12 score: 57.2
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 94..212 e-value: 1.22234E-11 score: 58.404
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 222..333 e-value: 4.8E-4 score: 29.5
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 222..315 e-value: 4.7E-12 score: 46.1
None	No IPR available	GENE3D	1.10.472.10		coord: 66..307 e-value: 4.7E-38 score: 132.7
None	No IPR available	GENE3D	1.10.472.10		coord: 77..220 e-value: 4.7E-38 score: 132.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..381
None	No IPR available	PANTHER	PTHR10177:SF479	CYCLIN-D4-1-LIKE	coord: 48..170 coord: 189..378
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 67..219 e-value: 2.3E-23 score: 82.3
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 189..378
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 48..170
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 60..219

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G008020	Lsi01G008020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G008020.1.exon.1	Lsi01G008020.1.exon.1	exon
Lsi01G008020.1.exon.2	Lsi01G008020.1.exon.2	exon
Lsi01G008020.1.exon.3	Lsi01G008020.1.exon.3	exon
Lsi01G008020.1.exon.4	Lsi01G008020.1.exon.4	exon
Lsi01G008020.1.exon.5	Lsi01G008020.1.exon.5	exon
Lsi01G008020.1.exon.6	Lsi01G008020.1.exon.6	exon
Lsi01G008020.1.exon.7	Lsi01G008020.1.exon.7	exon
Lsi01G008020.1.exon.8	Lsi01G008020.1.exon.8	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G008020.1.three_prime_UTR.2	Lsi01G008020.1.three_prime_UTR.2	three_prime_UTR
Lsi01G008020.1.three_prime_UTR.1	Lsi01G008020.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G008020.1.CDS.6	Lsi01G008020.1.CDS.6	CDS
Lsi01G008020.1.CDS.5	Lsi01G008020.1.CDS.5	CDS
Lsi01G008020.1.CDS.4	Lsi01G008020.1.CDS.4	CDS
Lsi01G008020.1.CDS.3	Lsi01G008020.1.CDS.3	CDS
Lsi01G008020.1.CDS.2	Lsi01G008020.1.CDS.2	CDS
Lsi01G008020.1.CDS.1	Lsi01G008020.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G008020.1.five_prime_UTR.2	Lsi01G008020.1.five_prime_UTR.2	five_prime_UTR
Lsi01G008020.1.five_prime_UTR.1	Lsi01G008020.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G008020.1	Lsi01G008020.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity