Lcy09g001420 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCGGCCACGGCCGCAAGCCAGCACAATGCCACTACCAACGTCACGTTTCCAGCCCACCCACCGCCGTTTTCCGCAGCTGCAAATTCGTTAATTCTCGAAGAACATAACAACACCAACTTTATATTTTCTGGTCCTTTTGATTTCAACCCACAAGATCAATTTCCCATCTTGAATCCACAAGAATTTACAACTTCCCATTTTCCAGTATTAAATTATGGGTTTTATCAGCACCCACAGGAAAATCAAATGGAAGAATTTCATGCAAGTAATATAGGACAATGA ATGGCTGCGGCCACGGCCGCAAGCCAGCACAATGCCACTACCAACGTCACGTTTCCAGCCCACCCACCGCCGTTTTCCGCAGCTGCAAATTCGTTAATTCTCGAAGAACATAACAACACCAACTTTATATTTTCTGGTCCTTTTGATTTCAACCCACAAGATCAATTTCCCATCTTGAATCCACAAGAATTTACAACTTCCCATTTTCCAGTATTAAATTATGGGTTTTATCAGCACCCACAGGAAAATCAAATGGAAGAATTTCATGCAAGTAATATAGGACAATGA ATGGCTGCGGCCACGGCCGCAAGCCAGCACAATGCCACTACCAACGTCACGTTTCCAGCCCACCCACCGCCGTTTTCCGCAGCTGCAAATTCGTTAATTCTCGAAGAACATAACAACACCAACTTTATATTTTCTGGTCCTTTTGATTTCAACCCACAAGATCAATTTCCCATCTTGAATCCACAAGAATTTACAACTTCCCATTTTCCAGTATTAAATTATGGGTTTTATCAGCACCCACAGGAAAATCAAATGGAAGAATTTCATGCAAGTAATATAGGACAATGA MAAATAASQHNATTNVTFPAHPPPFSAAANSLILEEHNNTNFIFSGPFDFNPQDQFPILNPQEFTTSHFPVLNYGFYQHPQENQMEEFHASNIGQ Homology
BLAST of Lcy09g001420 vs. ExPASy TrEMBL
Match: A0A6J1F5Y4 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.8e-08 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lcy09g001420 vs. ExPASy TrEMBL
Match: A0A6J1KT76 (transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.2e-08 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Lcy09g001420 vs. NCBI nr
Match: XP_023530624.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 68.6 bits (166), Expect = 3.4e-08 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lcy09g001420 vs. NCBI nr
Match: XP_022933833.1 (transcription factor MYB36-like [Cucurbita moschata]) HSP 1 Score: 67.8 bits (164), Expect = 5.8e-08 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lcy09g001420 vs. NCBI nr
Match: KAG6588016.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.8 bits (164), Expect = 5.8e-08 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lcy09g001420 vs. NCBI nr
Match: XP_023005467.1 (transcription factor RAX3-like [Cucurbita maxima]) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Lcy09g001420 vs. NCBI nr
Match: KAG7021913.1 (Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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