Lag0039274 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTAGGTCCACGATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGAGACCCACATAAGGGGAAAGTTCGGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGAAACAACCAAATATACCTCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGTCGAATCGTGGACCTACTTTTTTCGAAAAATCGATCGTGCTATTGGTCAACTTAATCCCCTTGTGATTGTATCTGACAGACACAAGAGCATATTGAAGGCAGCACAGACTGTGATTCCTGATGCAGCCCACGTTTACTGTATCCACCATCTACAAGAAAACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCCACTCTACCTTAAAGCAACGAAGGCATTTCGTGATACAGAGTTTCAGGAATTTTGGAGCCAAATTCCAATGTGTCCAAAAATACTTGGAAGAAGTCGGACTTGA ATGGAAATTAGGTCCACGATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGAGACCCACATAAGGGGAAAGTTCGGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGAAACAACCAAATATACCTCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGTCGAATCGTGGACCTACTTTTTTCGAAAAATCGATCGTGCTATTGGTCAACTTAATCCCCTTGTGATTGTATCTGACAGACACAAGAGCATATTGAAGGCAGCACAGACTGTGATTCCTGATGCAGCCCACGTTTACTGTATCCACCATCTACAAGAAAACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCCACTCTACCTTAAAGCAACGAAGGCATTTCGTGATACAGAGTTTCAGGAATTTTGGAGCCAAATTCCAATGTGTCCAAAAATACTTGGAAGAAGTCGGACTTGA ATGGAAATTAGGTCCACGATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGAGACCCACATAAGGGGAAAGTTCGGTGGAAAGCTCCTAACTGCAGTAGGCATCGATGGAAACAACCAAATATACCTCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGTCGAATCGTGGACCTACTTTTTTCGAAAAATCGATCGTGCTATTGGTCAACTTAATCCCCTTGTGATTGTATCTGACAGACACAAGAGCATATTGAAGGCAGCACAGACTGTGATTCCTGATGCAGCCCACGTTTACTGTATCCACCATCTACAAGAAAACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCCACTCTACCTTAAAGCAACGAAGGCATTTCGTGATACAGAGTTTCAGGAATTTTGGAGCCAAATTCCAATGTGTCCAAAAATACTTGGAAGAAGTCGGACTTGA MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKILGRSRT Homology
BLAST of Lag0039274 vs. NCBI nr
Match: XP_038885923.1 (uncharacterized protein LOC120076231 [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 3.7e-36 Identity = 79/148 (53.38%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of Lag0039274 vs. NCBI nr
Match: XP_038882416.1 (protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida]) HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35 Identity = 77/138 (55.80%), Postives = 99/138 (71.74%), Query Frame = 0
BLAST of Lag0039274 vs. NCBI nr
Match: XP_022147769.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]) HSP 1 Score: 151.8 bits (382), Expect = 5.0e-33 Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 0
BLAST of Lag0039274 vs. NCBI nr
Match: XP_022157237.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]) HSP 1 Score: 149.4 bits (376), Expect = 2.5e-32 Identity = 70/150 (46.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Lag0039274 vs. NCBI nr
Match: XP_022156566.1 (uncharacterized protein LOC111023441 [Momordica charantia]) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-31 Identity = 70/148 (47.30%), Postives = 97/148 (65.54%), Query Frame = 0
BLAST of Lag0039274 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06 Identity = 34/137 (24.82%), Postives = 71/137 (51.82%), Query Frame = 0
BLAST of Lag0039274 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.2e-06 Identity = 30/138 (21.74%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of Lag0039274 vs. ExPASy Swiss-Prot
Match: P59787 (Transposase for insertion sequence element IS256 in transposon Tn4001 OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0125 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 7.9e-05 Identity = 32/124 (25.81%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Lag0039274 vs. ExPASy Swiss-Prot
Match: P19775 (Transposase for insertion sequence element IS256 in transposon Tn4001 OS=Staphylococcus aureus OX=1280 GN=tnp PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 7.9e-05 Identity = 32/124 (25.81%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Lag0039274 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04 Identity = 30/139 (21.58%), Postives = 63/139 (45.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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