Lag0032736 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTACGTGAAGCCATTGAACTTGTTTCACGATTTATTGAAGAGAAATGCCCTTGAACGTGGCCGTTTTCTCGGTTTGGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCGGATAATAAAATCGCCTCACCTCTTAGGTATTTTGTTTCTGTTTATTGGGATTGTGTCTGAAAAGATTGGAAGTAATGGGTTTGAAGTTGAGGTTAAAAGAACATGACCAGTATTAGTTGTTGTTCGTTGCTGCAGTGTTTTGCTCAGGAAGAAAACAAACATGCATTTGGTGGCTCAGGATTTTCAGAGATTGGTGAGATTTTTTACTCTGTTTCTTTTATCTTTTTCCTTCCTATGAAGTAAGAATGTTATTTGATGCAATGCTAAATGATAAACAATGATTGAAGGGTGGTGCCACAAGATTCTGTAGGGAGAACTTTAATTTACTTGATTTTCAGTGAGTACCTTCTTAGGTCCAAATGGGATTCTTTATGATGACATGATGAATAGAATGTAGTTGAATAGCTCTAACTTTACCCTTTTTTTCTTTTCCCTCTCTTTTTCTGTGATGTGTTGCTGTGCAGCTAAGACACATGAATATGGATACGCTAACACACATGGAGACATGTCATTTTTTTAAAATCTAGGATATGGACACAACAAGGACACGTTTGTTTAAATATAAATTTTTTAAAATATATATCATTTTTATTTTCGATGTATTTTGCTCTCAAAATTTATTTTTTATCCTATATTATTACGTGATTTTTATTCTATATTATTATGTGTCTATTTGTATTTTTAACGAGTGTTTGATGCTTGTCTAACTCATATCTATTTTGTTAACAAGTGTTCGAACGTGTCAAAGTATCTAACATATGTTAGATATGAACATGTTTGTTAAACTAAAGTGTTTGTGCTTCTTAGCTCTGAAGTATATTTGTCTTTAATCTGTGATTATATGATAGTGAATTGCCAATGCTAGTCTTTCTTGTAATGCTTCAGTCATTTCCATCCCATATATATTTACAGCTGCTCTGGTTTGTGTATGCAGATCTCTGAACTCTCTTTGGCGGGGTTCATTGTTGGGTACCCTTTCGATGGAAAACGACCCAACGCCGATGTGTGTTATTTATATATCTTAAAGATCATAATTATTGACTCTCGACTCTATTTGAGGCTATATTATTCTCTGTGAACAGGCTGTGCAAGTGAAGATCTTCATTGACGACCTTTGTAAAACTGGAAAACTTGAAGGTGTAAAATATACCTTTTGGAATGAGTGCTTTACATCAAAGGTTAGTGCATCTAGTTGTCAAAGTGTTTGTGTGGCAAGCCCTTCCTGTTAGTCTTGTGACTTATGTCACATGCCTTTCAATGTCTTCGCCAATTCAATGACTCAGTCAAACAAGTGTGATTATGTTTGAATTGTCTGTCTCACCTTTTTAAATCGTGGTATTGACTTGTGAATAGGCTGCTGCATTGCATTTCATTCAACATTGAATATTGAATTTGTGATTTTTGATCTCTATACACAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTTTGCTGCTGTTGGAATACTTCAGGTAATTTACAATTCTCTCTCTCTTTGGTTTAAGCTTTCCATTATCTTGATATGGTTGGCAGCTAAAATGGATATCAATTTGCTCAATGTAAGAATTGTATCTTAAAATATCAATTAAAGCTTCAGTGCATTAACAATAAGGTGGTGTATCTCAGGGTTACTTGGATTATTTTAACAGAAAATCAGATTTGGAAGAGAGGTAG ATGAAGTACGTGAAGCCATTGAACTTGTTTCACGATTTATTGAAGAGAAATGCCCTTGAACGTGGCCGTTTTCTCGGTTTGGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCGGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAACATGCATTTGGTGGCTCAGGATTTTCAGAGATTGATCTCTGAACTCTCTTTGGCGGGGTTCATTGTTGGGTACCCTTTCGATGGAAAACGACCCAACGCCGATGCTGTGCAAGTGAAGATCTTCATTGACGACCTTTGTAAAACTGGAAAACTTGAAGGTGTAAAATATACCTTTTGGAATGAGTGCTTTACATCAAAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAATCAGATTTGGAAGAGAGGTAG ATGAAGTACGTGAAGCCATTGAACTTGTTTCACGATTTATTGAAGAGAAATGCCCTTGAACGTGGCCGTTTTCTCGGTTTGGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCGGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAACATGCATTTGGTGGCTCAGGATTTTCAGAGATTGATCTCTGAACTCTCTTTGGCGGGGTTCATTGTTGGGTACCCTTTCGATGGAAAACGACCCAACGCCGATGCTGTGCAAGTGAAGATCTTCATTGACGACCTTTGTAAAACTGGAAAACTTGAAGGTGTAAAATATACCTTTTGGAATGAGTGCTTTACATCAAAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAATCAGATTTGGAAGAGAGGTAG MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER Homology
BLAST of Lag0032736 vs. NCBI nr
Match: XP_022995255.1 (uncharacterized protein LOC111490857 [Cucurbita maxima] >XP_022995256.1 uncharacterized protein LOC111490857 [Cucurbita maxima]) HSP 1 Score: 318.5 bits (815), Expect = 3.4e-83 Identity = 155/169 (91.72%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of Lag0032736 vs. NCBI nr
Match: XP_022957830.1 (uncharacterized protein LOC111459253 [Cucurbita moschata] >XP_022957831.1 uncharacterized protein LOC111459253 [Cucurbita moschata] >XP_022957832.1 uncharacterized protein LOC111459253 [Cucurbita moschata]) HSP 1 Score: 317.4 bits (812), Expect = 7.5e-83 Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of Lag0032736 vs. NCBI nr
Match: XP_023533829.1 (uncharacterized protein LOC111795559 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82 Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of Lag0032736 vs. NCBI nr
Match: KAG7036046.1 (hypothetical protein SDJN02_02846 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78 Identity = 154/194 (79.38%), Postives = 162/194 (83.51%), Query Frame = 0
BLAST of Lag0032736 vs. NCBI nr
Match: XP_022159849.1 (uncharacterized protein LOC111026145 [Momordica charantia] >XP_022159850.1 uncharacterized protein LOC111026145 [Momordica charantia] >XP_022159851.1 uncharacterized protein LOC111026145 [Momordica charantia]) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77 Identity = 145/166 (87.35%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of Lag0032736 vs. ExPASy Swiss-Prot
Match: B9MRK7 (Putative pre-16S rRNA nuclease OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=Athe_1211 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13 Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of Lag0032736 vs. ExPASy Swiss-Prot
Match: A4XKC6 (Putative pre-16S rRNA nuclease OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=Csac_1776 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.8e-13 Identity = 45/140 (32.14%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of Lag0032736 vs. ExPASy Swiss-Prot
Match: B6IN25 (Putative pre-16S rRNA nuclease OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=RC1_1518 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-12 Identity = 48/148 (32.43%), Postives = 74/148 (50.00%), Query Frame = 0
BLAST of Lag0032736 vs. ExPASy Swiss-Prot
Match: C4Z578 (Putative pre-16S rRNA nuclease OS=Lachnospira eligens (strain ATCC 27750 / DSM 3376 / VPI C15-48 / C15-B4) OX=515620 GN=EUBELI_00774 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.5e-12 Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 0
BLAST of Lag0032736 vs. ExPASy Swiss-Prot
Match: B8I4S7 (Putative pre-16S rRNA nuclease OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=Ccel_2239 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11 Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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