Lag0032465 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032465
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	HEAT repeat-containing protein 6 isoform X1
Location	chr11: 32942743 .. 32944659 (-)
RNA-Seq Expression	Lag0032465
Synteny	Lag0032465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGAACTTGGCCCACGAGGTAATGGGCCAAGTTAAGACTCCATGAATGAGCTATTTTCAACACTAAAGATAGATGTTTAGAATTTATTCAAAATGTTTTAGGATAGTCAAGGATCAATCAGCATAGCAAAGAATCATGTGCATCATGACAGAAGAAAACAAAACACATAAGGAGAGTTCATTCTTTGATATATATCTAAGAAGGTCAACAATAGTAATGATGGAACTGAAAATATGTCTCATCTCTCGCTATCAAATTGTTGACATTCTCATCAAAGCATTACTGAGTGCAAGCTTTTAAAGAATTCTGACTTCAAGCATTTGTATTCTATAATCCAACTTTAAGGGGAGGTGTAGATTTTTATTATCTAAGTAGAACATTATCTTTATCAAGATTCTAATCTTCTTCTTCTTTTTTTTTTAAAAAAAAAACAAAAAAAACAGATTCTAATATCTTTTAATCTTGTTACTTGTCTATCTTTTCCTTTTTATTTTATTTTCAGATTTGAGATCTTTCTGATTGAGAAAGTCTTCTAACTTTTAGTTAGATTATTTTTTAAAAAATTCTAACTGCACTATATTTATTTTGTAATTAGTTTCTATAAAAATAGTGAATAAGGAAATTATTTCCGAATTTAGTTTTTTTTCTTTTCTTCTACTCACTCTCTTTGGTGAGCTTGTATCTTTGAAAATTTTGTTTCTTTTCAATACTTCAGTTAAATGTTTCATTTCTTGTTAAAAAAATAAAAGTGAAATAAAACTACATTATTGTCTGATAGCAATGCAAGCATGCCACTTTCACCAGTGGAAGAGGCCACTTGAAGGAGCTTTAGATTTGTAGCATTTTTCTTTTTTATGAATTACTTTGCCACCAACTTTTTCATCATTTTATTTTTTTTTTAAGGGGTTCCTATTCAGAGTTTAAATGCACAAACAGATATATTTTTTTGTCTTTAGTGTGAAGTACGTTGTATCTGGAAGTTGTTTTTGCCACTTAATGTAGTAGTAAGTTTACTTTTTTTCTTTTTGCACCACTAGATTAAATCAAATGCTGTCAGAGCTCTTGGAAATCTTTCAAGGTTGATAAAGTTTTCGTGTTTACCTTCCTCCTGTGAGAAGCCTGTTAGCAATTCAGGGTTGTATCCAGTGGCTAATAACTCTGAGGATCTCTTGTCGAAGAGTGATTCAAAAGTTTATCCTGGATGCACATCTAAAAATCTCTATGATACAACTTCTTTCTATAATTCGAGTTTTCTCGAGAGAATAGTTCAGGCATTTATTTCTGGGATCACAACGGGAAATGTCAAGGTATGACTTGTCATGTGAAATTTAATTATCCCATCAGGCTTGCTTTAGAGATGTCTGTCTTTATAGCATTAAATATTTCATGATCACTAAAATTTAAACGTATGCTGAACAGGTCCAGTGGAATGTTTGTCATGCATTAAGCAACTTATTTTTAAATGAAACATTGAGACTGCAGGATATGGACAGGTAAAATTGAATTTAAAATGTTTGATAAAATCACATTGTCAAGTAACCAGTGTATATTCCTACTTCCTGCAATATGTTAGACTATAATTTTAAAGAATAACTTCCCTGGCCTCTTTTCAATGTAGCGTATTGTTTCTTGTTTTTTTTTTTAATAAATTAGAAAGAGAGAGAGAGAAACTTCCTTTCCAGGTCAGTCCTATAATTTTCGTGGATGGTTGTGATTGCAGGATGTGGACAGGTAAAACAGAATTAGATGTGTTTGATAAAATTAAATTGTCAAAAAAAATATATTTAAACAAACTCTTTAGGCTTAGTCAGTGATTTCAAGGTGCACTCAGGGGCTTGCCTACGGCGAGGGGCAATGCGAGGGTCACGTGGACCGCCTCTAGGTGGTATGCGAGGCAAGCACCTTCAATAA

mRNA sequence

ATGAAGGAGAACTTGGCCCACGAGATTAAATCAAATGCTGTCAGAGCTCTTGGAAATCTTTCAAGGTTGATAAAGTTTTCGTGTTTACCTTCCTCCTGTGAGAAGCCTGTTAGCAATTCAGGGTTGTATCCAGTGGCTAATAACTCTGAGGATCTCTTGTCGAAGAGTGATTCAAAAGTTTATCCTGGATGCACATCTAAAAATCTCTATGATACAACTTCTTTCTATAATTCGAGTTTTCTCGAGAGAATAGTTCAGGCATTTATTTCTGGGATCACAACGGGAAATGTCAAGGTCCAGTGGAATGTTTGTCATGCATTAAGCAACTTATTTTTAAATGAAACATTGAGACTGCAGGATATGGACAGGATGTGGACAGGGGCTTGCCTACGGCGAGGGGCAATGCGAGGGTCACGTGGACCGCCTCTAGGTGGTATGCGAGGCAAGCACCTTCAATAA

Coding sequence (CDS)

ATGAAGGAGAACTTGGCCCACGAGATTAAATCAAATGCTGTCAGAGCTCTTGGAAATCTTTCAAGGTTGATAAAGTTTTCGTGTTTACCTTCCTCCTGTGAGAAGCCTGTTAGCAATTCAGGGTTGTATCCAGTGGCTAATAACTCTGAGGATCTCTTGTCGAAGAGTGATTCAAAAGTTTATCCTGGATGCACATCTAAAAATCTCTATGATACAACTTCTTTCTATAATTCGAGTTTTCTCGAGAGAATAGTTCAGGCATTTATTTCTGGGATCACAACGGGAAATGTCAAGGTCCAGTGGAATGTTTGTCATGCATTAAGCAACTTATTTTTAAATGAAACATTGAGACTGCAGGATATGGACAGGATGTGGACAGGGGCTTGCCTACGGCGAGGGGCAATGCGAGGGTCACGTGGACCGCCTCTAGGTGGTATGCGAGGCAAGCACCTTCAATAA

Protein sequence

MKENLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDRMWTGACLRRGAMRGSRGPPLGGMRGKHLQ

Homology

[Close]

BLAST of Lag0032465 vs. NCBI nr
Match: XP_022159609.1 (HEAT repeat-containing protein 6 isoform X2 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 4    NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPG 63
            N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PG
Sbjct: 901  NDGDKIKSNAVRALGNLSRLIKFPCSPSTCEKPVSNSGLYLMANKSEDLLSKSDSKVHPG 960

Query: 64   CTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDR 123
            CTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNVCHA+SNLFLNETLRL DMDR
Sbjct: 961  CTSKNLYDT--FYNSSLLESIVQAFISGITTGNVKVQWNVCHAVSNLFLNETLRLHDMDR 1019

Query: 124  M 125
            +
Sbjct: 1021 V 1019

[Close]

BLAST of Lag0032465 vs. NCBI nr
Match: XP_022159610.1 (HEAT repeat-containing protein 6 isoform X3 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 4    NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPG 63
            N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PG
Sbjct: 901  NDGDKIKSNAVRALGNLSRLIKFPCSPSTCEKPVSNSGLYLMANKSEDLLSKSDSKVHPG 960

Query: 64   CTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDR 123
            CTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNVCHA+SNLFLNETLRL DMDR
Sbjct: 961  CTSKNLYDT--FYNSSLLESIVQAFISGITTGNVKVQWNVCHAVSNLFLNETLRLHDMDR 1019

Query: 124  M 125
            +
Sbjct: 1021 V 1019

[Close]

BLAST of Lag0032465 vs. NCBI nr
Match: XP_022159611.1 (HEAT repeat-containing protein 6 isoform X4 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 4   NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPG 63
           N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PG
Sbjct: 691 NDGDKIKSNAVRALGNLSRLIKFPCSPSTCEKPVSNSGLYLMANKSEDLLSKSDSKVHPG 750

Query: 64  CTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDR 123
           CTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNVCHA+SNLFLNETLRL DMDR
Sbjct: 751 CTSKNLYDT--FYNSSLLESIVQAFISGITTGNVKVQWNVCHAVSNLFLNETLRLHDMDR 809

Query: 124 M 125
           +
Sbjct: 811 V 809

[Close]

BLAST of Lag0032465 vs. NCBI nr
Match: XP_022159607.1 (HEAT repeat-containing protein 6 isoform X1 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 4    NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPG 63
            N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PG
Sbjct: 901  NDGDKIKSNAVRALGNLSRLIKFPCSPSTCEKPVSNSGLYLMANKSEDLLSKSDSKVHPG 960

Query: 64   CTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDR 123
            CTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNVCHA+SNLFLNETLRL DMDR
Sbjct: 961  CTSKNLYDT--FYNSSLLESIVQAFISGITTGNVKVQWNVCHAVSNLFLNETLRLHDMDR 1019

Query: 124  M 125
            +
Sbjct: 1021 V 1019

[Close]

BLAST of Lag0032465 vs. NCBI nr
Match: KAA0042623.1 (HEAT repeat-containing protein 6 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-47
Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 4    NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPG 63
            N   +IKSNAVRALGNLSRLIKFSCL S CE+P SNSGLY VANNSEDL SK DSKV  G
Sbjct: 880  NDGDKIKSNAVRALGNLSRLIKFSCLLSPCERPRSNSGLYSVANNSEDLFSKDDSKVNLG 939

Query: 64   CTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDMDR 123
            CTSKNL D  SFY+SSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQD+DR
Sbjct: 940  CTSKNLSDKNSFYSSSFLERIVQAFISGITTGNVKVQWNVCHALSNLFLNETLRLQDIDR 999

Query: 124  M 125
            +
Sbjct: 1000 V 1000

The following BLAST results are available for this feature:

BLAST of Lag0032465 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159609.1	3.2e-48	85.12	HEAT repeat-containing protein 6 isoform X2 [Momordica charantia]	[more]
XP_022159610.1	3.2e-48	85.12	HEAT repeat-containing protein 6 isoform X3 [Momordica charantia]	[more]
XP_022159611.1	3.2e-48	85.12	HEAT repeat-containing protein 6 isoform X4 [Momordica charantia]	[more]
XP_022159607.1	3.2e-48	85.12	HEAT repeat-containing protein 6 isoform X1 [Momordica charantia]	[more]
KAA0042623.1	3.5e-47	84.30	HEAT repeat-containing protein 6 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0032465 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13366	MALARIA ANTIGEN-RELATED	coord: 9..122
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 7..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032465.1	Lag0032465.1	mRNA