Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGTGAAGACTTAGTTCTGAGAATGTTGGAATCTTCCCGATGGTTGGTGTTGTAGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA
mRNA sequence
ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA
Coding sequence (CDS)
ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA
Protein sequence
MMAAAASPYDPGREVDLVKSSMNHRTNKITRNCLHHRRKLQINRRRRRRKPPGRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGVLEKADIDSDARRAVDSGGSGRVAFLRTRYGH
Homology
BLAST of Lag0028661 vs. NCBI nr
Match:
XP_038883910.1 (probable polyol transporter 6 [Benincasa hispida])
HSP 1 Score: 90.5 bits (223), Expect = 1.2e-14
Identity = 41/53 (77.36%), Postives = 49/53 (92.45%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGV 106
GRL+DAK+VLSKVSNTEEE LRF+DIK+A GIPEDCEQDV+K+H+K HG+GV
Sbjct: 224 GRLKDAKEVLSKVSNTEEEALLRFKDIKLAAGIPEDCEQDVVKMHRKTHGEGV 276
BLAST of Lag0028661 vs. NCBI nr
Match:
KAA0036241.1 (putative polyol transporter 6 [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14
Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGV 106
GRL+DA++VLSKVSNTEEE +RFRDIK+A G+PEDCEQDV+K+H+K HG+GV
Sbjct: 214 GRLKDAREVLSKVSNTEEEAVVRFRDIKLAAGVPEDCEQDVVKMHRKTHGEGV 266
BLAST of Lag0028661 vs. NCBI nr
Match:
XP_008440694.1 (PREDICTED: probable polyol transporter 6 [Cucumis melo])
HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14
Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGV 106
GRL+DA++VLSKVSNTEEE +RFRDIK+A G+PEDCEQDV+K+H+K HG+GV
Sbjct: 214 GRLKDAREVLSKVSNTEEEAVVRFRDIKLAAGVPEDCEQDVVKMHRKTHGEGV 266
BLAST of Lag0028661 vs. NCBI nr
Match:
XP_011658491.1 (probable polyol transporter 6 [Cucumis sativus] >KGN48817.1 hypothetical protein Csa_002831 [Cucumis sativus])
HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14
Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGV 106
GRL+DA++VLSKVSNTEEE +RFRDIK+A G+PEDCEQDV+K+H+K HG+GV
Sbjct: 214 GRLKDAREVLSKVSNTEEEAVVRFRDIKLAAGVPEDCEQDVVKMHRKTHGEGV 266
BLAST of Lag0028661 vs. NCBI nr
Match:
TYK12636.1 (putative polyol transporter 6 [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14
Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGV 106
GRL+DA++VLSKVSNTEEE +RFRDIK+A G+PEDCEQDV+K+H+K HG+GV
Sbjct: 214 GRLKDAREVLSKVSNTEEEAVVRFRDIKLAAGVPEDCEQDVVKMHRKTHGEGV 266
BLAST of Lag0028661 vs. ExPASy Swiss-Prot
Match:
Q8GXR2 (Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2)
HSP 1 Score: 58.9 bits (141), Expect = 5.1e-08
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLH-KKIHGKGV 106
GRL++ K++L VSN+ EE LRF+DIK A GI C DV+K+ KK HG+GV
Sbjct: 207 GRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGV 260
BLAST of Lag0028661 vs. ExPASy Swiss-Prot
Match:
Q8VZ80 (Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2)
HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKK-IHGKGV 106
GRL DAK VL K S++ E LR DIK A GIP DC DV+++ ++ HG+GV
Sbjct: 226 GRLGDAKRVLDKTSDSPTEATLRLEDIKHAAGIPADCHDDVVQVSRRNSHGEGV 279
BLAST of Lag0028661 vs. ExPASy Swiss-Prot
Match:
Q9XIH6 (Putative polyol transporter 2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=3 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 4.8e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKL-HKKIHGKGV 106
GRL DA VL K SNT+EE R DIK A GIP+D DV+ + +KK GKGV
Sbjct: 216 GRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGV 269
BLAST of Lag0028661 vs. ExPASy Swiss-Prot
Match:
Q9XIH7 (Putative polyol transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=3 SV=1)
HSP 1 Score: 51.6 bits (122), Expect = 8.1e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 53 GRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKL-HKKIHGKGV 106
GRL DA VL K SNT+EE R DIK A GIP+D DV+ + +KK GKGV
Sbjct: 216 GRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGV 269
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038883910.1 | 1.2e-14 | 77.36 | probable polyol transporter 6 [Benincasa hispida] | [more] |
KAA0036241.1 | 2.7e-14 | 73.58 | putative polyol transporter 6 [Cucumis melo var. makuwa] | [more] |
XP_008440694.1 | 2.7e-14 | 73.58 | PREDICTED: probable polyol transporter 6 [Cucumis melo] | [more] |
XP_011658491.1 | 2.7e-14 | 73.58 | probable polyol transporter 6 [Cucumis sativus] >KGN48817.1 hypothetical protein... | [more] |
TYK12636.1 | 2.7e-14 | 73.58 | putative polyol transporter 6 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Q8GXR2 | 5.1e-08 | 53.70 | Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2 | [more] |
Q8VZ80 | 9.6e-07 | 51.85 | Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2 | [more] |
Q9XIH6 | 4.8e-06 | 55.56 | Putative polyol transporter 2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=3 SV=1 | [more] |
Q9XIH7 | 8.1e-06 | 55.56 | Putative polyol transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=3 SV=1 | [more] |