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Lag0028661.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGTGAAGACTTAGTTCTGAGAATGTTGGAATCTTCCCGATGGTTGGTGTTGTAGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA ATGATGGCGGCGGCGGCCAGTCCGTACGACCCAGGTAGAGAGGTCGACCTCGTAAAGTCCTCCATGAACCACAGAACGAACAAGATAACTAGAAACTGCCTTCACCACCGCCGAAAGTTGCAGATAAACCGTCGGAGAAGAAGGCGAAAACCACCGGGCCGTTTACAGGACGCGAAAGACGTTCTATCGAAAGTTTCGAATACAGAGGAAGAAACAGCGCTTCGATTCAGAGACATTAAAGTCGCGACTGGAATTCCCGAGGATTGCGAGCAGGATGTTATGAAATTGCACAAAAAAATTCACGGCAAGGGGGTTTTAGAGAAAGCTGATATTGACTCCGACGCCCGCCGTGCGGTAGATTCTGGTGGCAGCGGTCGAGTTGCATTTCTTCGAACACGCTATGGGCATTGA MMAAAASPYDPGREVDLVKSSMNHRTNKITRNCLHHRRKLQINRRRRRRKPPGRLQDAKDVLSKVSNTEEETALRFRDIKVATGIPEDCEQDVMKLHKKIHGKGVLEKADIDSDARRAVDSGGSGRVAFLRTRYGH Homology
BLAST of Lag0028661.1 vs. NCBI nr
Match: XP_038883910.1 (probable polyol transporter 6 [Benincasa hispida]) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-14 Identity = 41/53 (77.36%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Lag0028661.1 vs. NCBI nr
Match: KAA0036241.1 (putative polyol transporter 6 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14 Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Lag0028661.1 vs. NCBI nr
Match: XP_008440694.1 (PREDICTED: probable polyol transporter 6 [Cucumis melo]) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14 Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Lag0028661.1 vs. NCBI nr
Match: XP_011658491.1 (probable polyol transporter 6 [Cucumis sativus] >KGN48817.1 hypothetical protein Csa_002831 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14 Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Lag0028661.1 vs. NCBI nr
Match: TYK12636.1 (putative polyol transporter 6 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14 Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of Lag0028661.1 vs. ExPASy Swiss-Prot
Match: Q8GXR2 (Probable polyol transporter 6 OS=Arabidopsis thaliana OX=3702 GN=PLT6 PE=2 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-08 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Lag0028661.1 vs. ExPASy Swiss-Prot
Match: Q8VZ80 (Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07 Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Lag0028661.1 vs. ExPASy Swiss-Prot
Match: Q9XIH6 (Putative polyol transporter 2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.8e-06 Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Lag0028661.1 vs. ExPASy Swiss-Prot
Match: Q9XIH7 (Putative polyol transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.1e-06 Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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