Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATGGATGTTGAAGAGTTAGTAAATGAATGGAAGAATTTCAATCTAATGGAGAAAGAGAAAGGAAATGACATAAAGCTAGATGAAGAAGATATGACAGAAATCAAAGATCAGATGGACCACTGCATCGTTGGAAAGCTTCTCTCCAATCGAATCATTGCCCCATTGGCCATCAAGAATGCTTTGAGAGGAGCTTGGAAAACAAGGAAAAATTTCAAAGTTGAATCCACTGGGAAAAATATATTCAACTTCAAGTTTGAATGCCAAGAAGACAGAAACTGGGTGATGTGCAATGGTCCATGGACTTTTGACAATTCACTAATAGTTCTTGAATACCCAATGGCTAATCAAAGATCCGTGGAGATGGAGTTCAAGAATGCTGTTTTTTGGATAAGGTTAATAAACCTACCTATGGGATACAGAAACAGGAAAGTGGCAAGTAAAATAGGGAATAGTATTGGAGATTTTATTGATGGAGGAGAATGTGATGAAGAGCTTGTTTGGGGCCAAAGTATGCGCATAAGAGTAAGGTTAGACATAACTAAGCCTCTGTTGAGAGGCTTTATGCTCAAAGGACCTGATATCAAAGGGGAATGCTGGGTTACTATACGTTATGAAAGGTTGCCTGAGCTCTGTTTTCTTTGTGGCAAGATTGGGCACGTTGCAAAGGATTGTGAAAGTGGAAAAGGAAGAAAGGAAAGTAACATGGACAAATGGGAATTTGGGAACTGGTTACGGTTCCAATCTTTCCCAAGATTCACCAAGAAACCTGATTCACCAACCAATTCAAATTATAACCAAGATTTTCAGAAAGACCAGTCTGGGGAAGGAGGAAAAGACAGAGAGATAGGGCCAAGTTATGGGGAGAAAGGCAAAGCGATTATTGGGTATGATTTAGAAGCTGAAGAAGATCTTTATGATTTGCGAAACAAAGGGGAGGAAGGTACATCCTCTTGGACTTATGATCTAAAACAGTGGCAAACATGGAGACTGAATTAA
mRNA sequence
ATGAACATGGATGTTGAAGAGTTAGTAAATGAATGGAAGAATTTCAATCTAATGGAGAAAGAGAAAGGAAATGACATAAAGCTAGATGAAGAAGATATGACAGAAATCAAAGATCAGATGGACCACTGCATCGTTGGAAAGCTTCTCTCCAATCGAATCATTGCCCCATTGGCCATCAAGAATGCTTTGAGAGGAGCTTGGAAAACAAGGAAAAATTTCAAAGTTGAATCCACTGGGAAAAATATATTCAACTTCAAGTTTGAATGCCAAGAAGACAGAAACTGGGTGATGTGCAATGGTCCATGGACTTTTGACAATTCACTAATAGTTCTTGAATACCCAATGGCTAATCAAAGATCCGTGGAGATGGAGTTCAAGAATGCTGTTTTTTGGATAAGGTTAATAAACCTACCTATGGGATACAGAAACAGGAAAGTGGCAAGTAAAATAGGGAATAGTATTGGAGATTTTATTGATGGAGGAGAATGTGATGAAGAGCTTGTTTGGGGCCAAAGTATGCGCATAAGAGTAAGGTTAGACATAACTAAGCCTCTGTTGAGAGGCTTTATGCTCAAAGGACCTGATATCAAAGGGGAATGCTGGGTTACTATACGTTATGAAAGGTTGCCTGAGCTCTGTTTTCTTTGTGGCAAGATTGGGCACGTTGCAAAGGATTGTGAAAGTGGAAAAGGAAGAAAGGAAAGTAACATGGACAAATGGGAATTTGGGAACTGGTTACGGTTCCAATCTTTCCCAAGATTCACCAAGAAACCTGATTCACCAACCAATTCAAATTATAACCAAGATTTTCAGAAAGACCAGTCTGGGGAAGGAGGAAAAGACAGAGAGATAGGGCCAAGTTATGGGGAGAAAGGCAAAGCGATTATTGGGTATGATTTAGAAGCTGAAGAAGATCTTTATGATTTGCGAAACAAAGGGGAGGAAGGTACATCCTCTTGGACTTATGATCTAAAACAGTGGCAAACATGGAGACTGAATTAA
Coding sequence (CDS)
ATGAACATGGATGTTGAAGAGTTAGTAAATGAATGGAAGAATTTCAATCTAATGGAGAAAGAGAAAGGAAATGACATAAAGCTAGATGAAGAAGATATGACAGAAATCAAAGATCAGATGGACCACTGCATCGTTGGAAAGCTTCTCTCCAATCGAATCATTGCCCCATTGGCCATCAAGAATGCTTTGAGAGGAGCTTGGAAAACAAGGAAAAATTTCAAAGTTGAATCCACTGGGAAAAATATATTCAACTTCAAGTTTGAATGCCAAGAAGACAGAAACTGGGTGATGTGCAATGGTCCATGGACTTTTGACAATTCACTAATAGTTCTTGAATACCCAATGGCTAATCAAAGATCCGTGGAGATGGAGTTCAAGAATGCTGTTTTTTGGATAAGGTTAATAAACCTACCTATGGGATACAGAAACAGGAAAGTGGCAAGTAAAATAGGGAATAGTATTGGAGATTTTATTGATGGAGGAGAATGTGATGAAGAGCTTGTTTGGGGCCAAAGTATGCGCATAAGAGTAAGGTTAGACATAACTAAGCCTCTGTTGAGAGGCTTTATGCTCAAAGGACCTGATATCAAAGGGGAATGCTGGGTTACTATACGTTATGAAAGGTTGCCTGAGCTCTGTTTTCTTTGTGGCAAGATTGGGCACGTTGCAAAGGATTGTGAAAGTGGAAAAGGAAGAAAGGAAAGTAACATGGACAAATGGGAATTTGGGAACTGGTTACGGTTCCAATCTTTCCCAAGATTCACCAAGAAACCTGATTCACCAACCAATTCAAATTATAACCAAGATTTTCAGAAAGACCAGTCTGGGGAAGGAGGAAAAGACAGAGAGATAGGGCCAAGTTATGGGGAGAAAGGCAAAGCGATTATTGGGTATGATTTAGAAGCTGAAGAAGATCTTTATGATTTGCGAAACAAAGGGGAGGAAGGTACATCCTCTTGGACTTATGATCTAAAACAGTGGCAAACATGGAGACTGAATTAA
Protein sequence
MNMDVEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALRGAWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEFKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKPLLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWEFGNWLRFQSFPRFTKKPDSPTNSNYNQDFQKDQSGEGGKDREIGPSYGEKGKAIIGYDLEAEEDLYDLRNKGEEGTSSWTYDLKQWQTWRLN
Homology
BLAST of Lag0020132 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 206.1 bits (523), Expect = 4.8e-49
Identity = 102/248 (41.13%), Postives = 151/248 (60.89%), Query Frame = 0
Query: 3 MDVEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNA 62
MD E L+ +W+ F L +E + +D + + + + + +VGKLL+ RII+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 63 LRGAWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVE 122
L AWK VES GKN+F F F + D N VM GPW FD +LIVL+ P +++ E
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 123 MEFKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEE-LVWGQSMRIRVRLDI 182
+EF FWI L +LPM + N+ +A ++GN+IG+F+D +C+E+ WG S+RIRV +DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVD-VDCNEKGFSWGASLRIRVLIDI 180
Query: 183 TKPLLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESG-KGRKESNMDKW 242
TKPL RG + G CW+ I+YERLP+ C+ CG IGH + DC++ ++ +
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS 240
Query: 243 EFGNWLRF 249
E+G WLRF
Sbjct: 241 EYGPWLRF 247
BLAST of Lag0020132 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 186.8 bits (473), Expect = 3.0e-43
Identity = 91/248 (36.69%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 3 MDVEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNA 62
M L+ EWKNF L +E + +D + ++ ++ KLLS R I+ +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 63 LRGAWKTR-KNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSV 122
L+ AWK K F V+ G NIF F F DRN ++ GPWTFD +LI+++ P++ + +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 123 EMEFKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDI 182
+M+F+N W+ +L + N+ +A+++GN+IG F D WG +R+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 183 TKPLLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWE 242
KPL RG L G CW+ I+YERLP+ + CG++ H+ KDC +S +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSD--CCVDSVSKNLQ 240
Query: 243 FGNWLRFQ 250
+G WLRFQ
Sbjct: 241 YGPWLRFQ 246
BLAST of Lag0020132 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 176.4 bits (446), Expect = 4.1e-40
Identity = 99/282 (35.11%), Postives = 148/282 (52.48%), Query Frame = 0
Query: 7 ELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALRGA 66
+L+ EWKNF L +E+ I +D +++ +VGKL R I +KN +R A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 67 WKTRKN-FKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEF 126
WK N F+V+S G N+F F F DRN + +GPWTFD +L+++ P+A E++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 127 KNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDE-ELVWGQSMRIRVRLDITKP 186
W+R +LP+G R +A ++GN++G F + +CD+ WG ++R+RV LDI+KP
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGF-EEADCDDLNPDWGSNLRVRVMLDISKP 184
Query: 187 LLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWEFGN 246
L RG L G W+ I+YERLP+ C+ CG S+ K ++G+
Sbjct: 185 LRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQYGS 244
Query: 247 WLRFQSFPRFTKKPDSPTNSNYNQDFQKDQSGEGGKDREIGP 287
WLR+Q T KP P +D D+SG P
Sbjct: 245 WLRYQG----TVKPTMPQMKQPQEDL-LDKSGNNSFSSSTSP 265
BLAST of Lag0020132 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 171.0 bits (432), Expect = 1.7e-38
Identity = 83/234 (35.47%), Postives = 130/234 (55.56%), Query Frame = 0
Query: 18 MEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALRGAWKTRKNFKVES 77
+ E+ +++ E + + + D C+VGKLL+ R A+KN L W+ K +V
Sbjct: 14 LTSEEDAVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRV 73
Query: 78 TGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEFKNAVFWIRLINL 137
G N+F F F D+ V+ +GPWTFD L++L N + +++ FW+ + NL
Sbjct: 74 IGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNL 133
Query: 138 PMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKPLLRGFMLKGPDIK 197
P+ N+KV +GN++G FID D +VWG++MRIRV LD+ KPL RG L +
Sbjct: 134 PLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLALSSAE 193
Query: 198 GECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKE-SNMDKWEFGNWLRFQS 251
WV +YERLP C+ CG++GH ++C+ + S +D ++G WLR +
Sbjct: 194 -PIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLRMDN 246
BLAST of Lag0020132 vs. NCBI nr
Match:
OMO70721.1 (Zinc finger, CCHC-type [Corchorus olitorius])
HSP 1 Score: 167.2 bits (422), Expect = 2.5e-37
Identity = 84/248 (33.87%), Postives = 136/248 (54.84%), Query Frame = 0
Query: 6 EELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALRG 65
E+L + WK+F L +E+ + I+ D+ + + DQ +VGKLL+ + A N ++
Sbjct: 3 EDLADLWKHFKLTAEEEDDVIEDDDLESNPVDDQPKPWLVGKLLTEKPFNKQAFMNTMKN 62
Query: 66 AWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEF 125
WK K ++ + +N+F FKF + D+ V+ PWTF N+L++ + R + F
Sbjct: 63 IWKLAKEVRMIALEENLFLFKFSTEGDKERVVDGSPWTFQNNLLMFANFHGDLRPEDYVF 122
Query: 126 KNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKPL 185
A+FWIR+ +L +G R R +A IG IG+ +D + + W +R+RV +D+TKPL
Sbjct: 123 TKALFWIRVYDLTLGKRTRDMAEIIGRRIGELVDVDQTLDGEGWADFLRVRVAIDVTKPL 182
Query: 186 LRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWEFGNW 245
R ++K D G + YER P C+ CG+IGHV++DC K KE + ++G W
Sbjct: 183 RRQILVKWDD--GNIRGRLAYERPPSFCYDCGRIGHVSEDCSMEKVIKEGEEEVKQYGPW 242
Query: 246 LRFQSFPR 254
+ S R
Sbjct: 243 MVASSLKR 248
BLAST of Lag0020132 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 2.3e-49
Identity = 102/248 (41.13%), Postives = 151/248 (60.89%), Query Frame = 0
Query: 3 MDVEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNA 62
MD E L+ +W+ F L +E + +D + + + + + +VGKLL+ RII+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 63 LRGAWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVE 122
L AWK VES GKN+F F F + D N VM GPW FD +LIVL+ P +++ E
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 123 MEFKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEE-LVWGQSMRIRVRLDI 182
+EF FWI L +LPM + N+ +A ++GN+IG+F+D +C+E+ WG S+RIRV +DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVD-VDCNEKGFSWGASLRIRVLIDI 180
Query: 183 TKPLLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESG-KGRKESNMDKW 242
TKPL RG + G CW+ I+YERLP+ C+ CG IGH + DC++ ++ +
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS 240
Query: 243 EFGNWLRF 249
E+G WLRF
Sbjct: 241 EYGPWLRF 247
BLAST of Lag0020132 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 1.5e-43
Identity = 91/248 (36.69%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 3 MDVEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNA 62
M L+ EWKNF L +E + +D + ++ ++ KLLS R I+ +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 63 LRGAWKTR-KNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSV 122
L+ AWK K F V+ G NIF F F DRN ++ GPWTFD +LI+++ P++ + +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 123 EMEFKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDI 182
+M+F+N W+ +L + N+ +A+++GN+IG F D WG +R+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 183 TKPLLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWE 242
KPL RG L G CW+ I+YERLP+ + CG++ H+ KDC +S +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSD--CCVDSVSKNLQ 240
Query: 243 FGNWLRFQ 250
+G WLRFQ
Sbjct: 241 YGPWLRFQ 246
BLAST of Lag0020132 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 2.0e-40
Identity = 99/282 (35.11%), Postives = 148/282 (52.48%), Query Frame = 0
Query: 7 ELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALRGA 66
+L+ EWKNF L +E+ I +D +++ +VGKL R I +KN +R A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 67 WKTRKN-FKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEF 126
WK N F+V+S G N+F F F DRN + +GPWTFD +L+++ P+A E++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 127 KNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDE-ELVWGQSMRIRVRLDITKP 186
W+R +LP+G R +A ++GN++G F + +CD+ WG ++R+RV LDI+KP
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGF-EEADCDDLNPDWGSNLRVRVMLDISKP 184
Query: 187 LLRGFMLKGPDIKGECWVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMDKWEFGN 246
L RG L G W+ I+YERLP+ C+ CG S+ K ++G+
Sbjct: 185 LRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQYGS 244
Query: 247 WLRFQSFPRFTKKPDSPTNSNYNQDFQKDQSGEGGKDREIGP 287
WLR+Q T KP P +D D+SG P
Sbjct: 245 WLRYQG----TVKPTMPQMKQPQEDL-LDKSGNNSFSSSTSP 265
BLAST of Lag0020132 vs. ExPASy TrEMBL
Match:
A0A2N9FNT0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38
Identity = 90/248 (36.29%), Postives = 138/248 (55.65%), Query Frame = 0
Query: 5 VEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALR 64
+E + + WKNF+L +KE G D+ D+ Q ++ + K L++R++ A+ +
Sbjct: 1 MESIEDMWKNFSLSDKE-GLDV-----DLANTSQQSENILAAKFLTSRVLNMDAVARTFK 60
Query: 65 GAWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEME 124
WKTR++F V+ G N F FE D V+ N PWT+D L+V + ++ +
Sbjct: 61 PLWKTRQSFTVQDIGGNKVAFVFEDAMDLERVLMNEPWTYDKFLVVFQRVQGDEPIQDSM 120
Query: 125 FKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKP 184
F + FW++L NLP+ R + A IG SIG ++E MR+R+RL+I +P
Sbjct: 121 FSHTSFWVQLHNLPIRRRTEEAAESIGRSIGLVEKVAASEDERGGENCMRVRIRLEINRP 180
Query: 185 LLRGFMLKGPD-IKGECWVTIRYERLPELCFLCGKIGHVAKDCESG-KGRKESNMDKWEF 244
L RG ++K + IKG WV RYERLP C+ CG + H KDC+ G + R+ SN +++F
Sbjct: 181 LCRGRLVKFEEGIKG--WVAFRYERLPNFCYWCGCLDHGEKDCDVGIQQRQTSNKQEYQF 240
Query: 245 GNWLRFQS 251
G WLR S
Sbjct: 241 GAWLRATS 240
BLAST of Lag0020132 vs. ExPASy TrEMBL
Match:
A0A2N9HYS7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 3.2e-38
Identity = 90/248 (36.29%), Postives = 138/248 (55.65%), Query Frame = 0
Query: 5 VEELVNEWKNFNLMEKEKGNDIKLDEEDMTEIKDQMDHCIVGKLLSNRIIAPLAIKNALR 64
+E + + WKNF+L +KE G D+ D+ Q ++ + K L++R++ A+ +
Sbjct: 1 MESIEDMWKNFSLSDKE-GLDV-----DLANTSQQSENILAAKFLTSRVLNMDAVARTFK 60
Query: 65 GAWKTRKNFKVESTGKNIFNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEME 124
WKTR++F V+ G N F FE D V+ N PWT+D L+V + ++ +
Sbjct: 61 PLWKTRQSFTVQDIGGNKVAFVFEDAMDLERVLRNEPWTYDKFLVVFQRVQGDEPIQDSM 120
Query: 125 FKNAVFWIRLINLPMGYRNRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKP 184
F + FW++L NLP+ R + A IG SIG ++E MR+R+RL+I +P
Sbjct: 121 FSHTSFWVQLHNLPIRRRTEEAAESIGRSIGLVEKVAASEDERGGENCMRVRIRLEINRP 180
Query: 185 LLRGFMLKGPD-IKGECWVTIRYERLPELCFLCGKIGHVAKDCESG-KGRKESNMDKWEF 244
L RG ++K + IKG WV RYERLP C+ CG + H KDC+ G + R+ SN +++F
Sbjct: 181 LCRGRLVKFEEGIKG--WVAFRYERLPNFCYCCGCLDHGEKDCDVGIQQRQTSNKQEYQF 240
Query: 245 GNWLRFQS 251
G WLR S
Sbjct: 241 GAWLRATS 240
BLAST of Lag0020132 vs. TAIR 10
Match:
AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 66.2 bits (160), Expect = 5.5e-11
Identity = 44/158 (27.85%), Postives = 70/158 (44.30%), Query Frame = 0
Query: 83 FNFKFECQEDRNWVMCNGPWTFDNSLIVLEYPMANQRSVEMEFKNAVFWIRLINLPMGYR 142
F+F F +E V+ GPW F++ +I+L+ + + + F FW+++ +P +
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILLQ---RWEPQIPL-FPFIPFWVQIRGIPFQFL 232
Query: 143 NRKVASKIGNSIGDFIDGGECDEELVWGQSMRIRVRLDITKPL--LRGFMLKGPDIKGEC 202
NR V IG ++G +D E + R+ + DIT PL R F
Sbjct: 233 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTA---GVNT 292
Query: 203 WVTIRYERLPELCFLCGKIGHVAKDCESGKGRKESNMD 239
+ RYERL C +CG + H C G +E D
Sbjct: 293 LLRFRYERLRGFCEVCGMLTHDFGACLIQNGGEEQADD 323
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 4.8e-49 | 41.13 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 3.0e-43 | 36.69 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 4.1e-40 | 35.11 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_028122006.1 | 1.7e-38 | 35.47 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
OMO70721.1 | 2.5e-37 | 33.87 | Zinc finger, CCHC-type [Corchorus olitorius] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 2.3e-49 | 41.13 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 1.5e-43 | 36.69 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 2.0e-40 | 35.11 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A2N9FNT0 | 2.4e-38 | 36.29 | RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 ... | [more] |
A0A2N9HYS7 | 3.2e-38 | 36.29 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G31430.1 | 5.5e-11 | 27.85 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |