Lag0017604 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAAGAGCCAGGAGACATCTTTGTCAGACGTCGAGCGACAGAGCCGATGGTGGAAAAAGGTATGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAAATCTTTTCATAACTTCATTCCAACAATGGTCAATCTAAGGACTCACCATGTTCAAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCCTGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTTATCCGCCGATGATGCGAATTCAAGTGGATCAGATGGATATTAAAGATCGATGGCAAGGGTTGATTGATGAACCAATGCGGAGCTTAGAGCGGGTTTCTGTGGGAGCTTGGTCTATTTGGAATGATAGGAACAGCTTGGTTCATAATCAACAAATCCCTGACCCAGTGGAGCGATGTGATTGGATCACAAATTATCTAGAAGCTTTCTGGTCCGCGAATCCTAAAAACATTTCCCATATCCAGACAAAAGAAGATATAGTTAATCTCATAGTACAAGGTGAAGAGAGGATTATGCATACTGATGCTTCGTTTCAGGGGAATCTGAGTTCCTGTGGAATAGGTGTTGTCATACGTGATAAAATGGGATGTCTTGTGGCGGTGCAGTCCCTATCTTCCTTGGGTTGCATTTCGTCATTGGGTGCGGAAGCTATTGCGGTTTTAGAAGGGTTACGTTTGGCTAATAAGTTAAATATTCAGTGCCTAACTATTTTTTCAGACTCTTTGTCGCTGATCAATATGCTCAATGATGTGGTCCAGATGGAGGCTTGTGTTGCCGCAACGATTTGGGATATTAGAGCAATGAAAAGAACTTTCCAGAGAGTGAGTTTCGAGTATACGAAGCGTTGTTTTAATGGTCTTTCTCATAAGCTTGCAAGATCAGCGATTGTGTCACCTACTAATTTATGGGTAGGAAACTATCCTACATGGATAGAGACTGTATCGCTCAAAGAGCGAATGTTCTTTGTACCCCTATGGGGATCTGATGTTTTCGAATGTTATTATCATATTCTCAAAAAAAAAAAAAAATCTCAAATCAATTATAAATTTTATGAATCCTTTTAGGAGCTTTAATTTGGGTTTTCAATTTGGGAAAGAAAGGAACTTTGGAATTTAAAGTAAATCCCTAGAATTTTTCCTCTCACTGTTGCCTTATTGGTCATTCTTCCCAGTACCCTTAAAAGAAAAATTTCATCTCCTTCTCTCTCTCTTTCACGTATTAGTTTTACGAGTTTGGAGTTGTGGAACACTACCTTACGCATGTTTGAGCCGTCGGGTATTGTCTTGTAATCTTCAATGAATTTTGACTTATGTCGAATCCCTCAAACACGTGATTTGTGCGCCTTTTGGCTAGCAACTAGCATCGTTCTTCCTTTTTCGATAAGGTCATGCACTACCACATGCTCCATTAAGCTTCAATTTGGCTTACCCAAACGCTAACGACTCCAAAATTGTAGGATTAGATGCTTTCAATCACCAAATAGCATCTGTTAGGTTCAAATCAAACTTTTGGCATTTACCCATAGCTTGAAAGGTCTCATATTATATTACCCATAGTCCTACGGCTTTGGATCATTGTTTTTGGAGCTTTTCGATCACTGTGCAGCAAGGTTCAGGCCCTTTTCAATAAGGTTCGGCAACTTGCAGCGTGCTCTAATTAAAGTGCTTTAAGGTTGTTAACTTGTTCTCTAATCCTTGGAGGGCCTTTGCTTGTAGGTTTGGACTCTTTCAATCTCGGTCCAACATTAGTTCGAGCTTGTTTGGGTAGTTCAGTAAGTTTCAGTAAACGTTATACCCGTTCGAATTTATTAAAAGTATTTTTAAGGTTTGATATATCAATCCCTGATGTTTGGAAGTTCTCCGTTTGTAGGTTCAGACTCATTCGATCACTTGTAGCTTGGACCCAAGTTCTTTTTGGTGAGGACCAGTTAGGAAAGCTTTGTTTAAACCCTTTCAAGCTAGTTTTGTGTGTTGTGAATTAGTTTCTAATCCTTATAAACTTTGCTTATAGTTTGAGCTTGCTTTCAGATTGTTCAAATCCCATCGCCTATTGTTGGGAGCTCGTTAGGTTCACTTAG ATGCTGAAGAGCCAGGAGACATCTTTGTCAGACGTCGAGCGACAGAGCCGATGGTGGAAAAAGGTATGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAAATCTTTTCATAACTTCATTCCAACAATGGTCAATCTAAGGACTCACCATGTTCAAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCCTGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTTATCCGCCGATGATGCGAATTCAAGTGGATCAGATGGATATTAAAGATCGATGGCAAGGGTTGATTGATGAACCAATGCGGAGCTTAGAGCGGGTTTCTGTGGGAGCTTGGTCTATTTGGAATGATAGGAACAGCTTGGTTCATAATCAACAAATCCCTGACCCAGTGGAGCGATGTGATTGGATCACAAATTATCTAGAAGCTTTCTGGTCCGCGAATCCTAAAAACATTTCCCATATCCAGACAAAAGAAGATATAGTTAATCTCATAGTACAAGGTGAAGAGAGGATTATGCATACTGATGCTTCGTTTCAGGGGAATCTGAGTTCCTGTGGAATAGGTGTTGTCATACGTGATAAAATGGGATGTCTTGTGGCGGTGCAGTCCCTATCTTCCTTGGGTTGCATTTCGTCATTGGGTGCGGAAGCTATTGCGGTTTTAGAAGGGTTACGTTTGGCTAATAAGTTAAATATTCAGTGCCTAACTATTTTTTCAGACTCTTTGTCGCTGATCAATATGCTCAATGATGTGGTCCAGATGGAGGCTTGTGTTGCCGCAACGATTTGGGATATTAGAGCAATGAAAAGAACTTTCCAGAGAGTGAGTTTCGAGTATACGAAGCGTTGTTTTAATGGTCTTTCTCATAAGCTTGCAAGATCAGCGATTGTGTCACCTACTAATTTATGGGTAGGAAACTATCCTACATGGATAGAGACTGTATCGCTCAAAGAGCGAATGTTCTTTGTACCCCTATGGGGATCTGATGTTTTCGAATGTTTGGACTCTTTCAATCTCGGTCCAACATTAGTTCGAGCTTGTTTGGGTAGTTCAGTTCAGACTCATTCGATCACTTGTAGCTTGGACCCAAGTTCTTTTTGTTTGAGCTTGCTTTCAGATTGTTCAAATCCCATCGCCTATTGTTGGGAGCTCGTTAGGTTCACTTAG ATGCTGAAGAGCCAGGAGACATCTTTGTCAGACGTCGAGCGACAGAGCCGATGGTGGAAAAAGGTATGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAAATCTTTTCATAACTTCATTCCAACAATGGTCAATCTAAGGACTCACCATGTTCAAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCCTGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTTATCCGCCGATGATGCGAATTCAAGTGGATCAGATGGATATTAAAGATCGATGGCAAGGGTTGATTGATGAACCAATGCGGAGCTTAGAGCGGGTTTCTGTGGGAGCTTGGTCTATTTGGAATGATAGGAACAGCTTGGTTCATAATCAACAAATCCCTGACCCAGTGGAGCGATGTGATTGGATCACAAATTATCTAGAAGCTTTCTGGTCCGCGAATCCTAAAAACATTTCCCATATCCAGACAAAAGAAGATATAGTTAATCTCATAGTACAAGGTGAAGAGAGGATTATGCATACTGATGCTTCGTTTCAGGGGAATCTGAGTTCCTGTGGAATAGGTGTTGTCATACGTGATAAAATGGGATGTCTTGTGGCGGTGCAGTCCCTATCTTCCTTGGGTTGCATTTCGTCATTGGGTGCGGAAGCTATTGCGGTTTTAGAAGGGTTACGTTTGGCTAATAAGTTAAATATTCAGTGCCTAACTATTTTTTCAGACTCTTTGTCGCTGATCAATATGCTCAATGATGTGGTCCAGATGGAGGCTTGTGTTGCCGCAACGATTTGGGATATTAGAGCAATGAAAAGAACTTTCCAGAGAGTGAGTTTCGAGTATACGAAGCGTTGTTTTAATGGTCTTTCTCATAAGCTTGCAAGATCAGCGATTGTGTCACCTACTAATTTATGGGTAGGAAACTATCCTACATGGATAGAGACTGTATCGCTCAAAGAGCGAATGTTCTTTGTACCCCTATGGGGATCTGATGTTTTCGAATGTTTGGACTCTTTCAATCTCGGTCCAACATTAGTTCGAGCTTGTTTGGGTAGTTCAGTTCAGACTCATTCGATCACTTGTAGCTTGGACCCAAGTTCTTTTTGTTTGAGCTTGCTTTCAGATTGTTCAAATCCCATCGCCTATTGTTGGGAGCTCGTTAGGTTCACTTAG MLKSQETSLSDVERQSRWWKKVWKMNVPSKVKNFVWKSFHNFIPTMVNLRTHHVQVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVDQMDIKDRWQGLIDEPMRSLERVSVGAWSIWNDRNSLVHNQQIPDPVERCDWITNYLEAFWSANPKNISHIQTKEDIVNLIVQGEERIMHTDASFQGNLSSCGIGVVIRDKMGCLVAVQSLSSLGCISSLGAEAIAVLEGLRLANKLNIQCLTIFSDSLSLINMLNDVVQMEACVAATIWDIRAMKRTFQRVSFEYTKRCFNGLSHKLARSAIVSPTNLWVGNYPTWIETVSLKERMFFVPLWGSDVFECLDSFNLGPTLVRACLGSSVQTHSITCSLDPSSFCLSLLSDCSNPIAYCWELVRFT Homology
BLAST of Lag0017604 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 5.8e-41 Identity = 110/332 (33.13%), Postives = 173/332 (52.11%), Query Frame = 0
BLAST of Lag0017604 vs. NCBI nr
Match: TXG50387.1 (hypothetical protein EZV62_022911 [Acer yangbiense]) HSP 1 Score: 153.7 bits (387), Expect = 3.4e-33 Identity = 93/299 (31.10%), Postives = 150/299 (50.17%), Query Frame = 0
BLAST of Lag0017604 vs. NCBI nr
Match: XP_030483669.1 (uncharacterized protein LOC115700241 [Cannabis sativa]) HSP 1 Score: 145.6 bits (366), Expect = 9.3e-31 Identity = 97/350 (27.71%), Postives = 152/350 (43.43%), Query Frame = 0
BLAST of Lag0017604 vs. NCBI nr
Match: XP_030498035.1 (uncharacterized protein LOC115713693 [Cannabis sativa]) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-30 Identity = 95/334 (28.44%), Postives = 152/334 (45.51%), Query Frame = 0
BLAST of Lag0017604 vs. NCBI nr
Match: XP_030508858.1 (uncharacterized protein LOC115723499 [Cannabis sativa]) HSP 1 Score: 144.4 bits (363), Expect = 2.1e-30 Identity = 89/326 (27.30%), Postives = 148/326 (45.40%), Query Frame = 0
BLAST of Lag0017604 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-41 Identity = 110/332 (33.13%), Postives = 173/332 (52.11%), Query Frame = 0
BLAST of Lag0017604 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.6e-33 Identity = 93/299 (31.10%), Postives = 150/299 (50.17%), Query Frame = 0
BLAST of Lag0017604 vs. ExPASy TrEMBL
Match: A0A803PV88 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.1e-32 Identity = 91/297 (30.64%), Postives = 143/297 (48.15%), Query Frame = 0
BLAST of Lag0017604 vs. ExPASy TrEMBL
Match: A0A2N9GM07 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28341 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 3.4e-31 Identity = 98/331 (29.61%), Postives = 169/331 (51.06%), Query Frame = 0
BLAST of Lag0017604 vs. ExPASy TrEMBL
Match: A0A803QH54 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 4.5e-31 Identity = 95/323 (29.41%), Postives = 148/323 (45.82%), Query Frame = 0
BLAST of Lag0017604 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 87.8 bits (216), Expect = 2.1e-17 Identity = 75/324 (23.15%), Postives = 134/324 (41.36%), Query Frame = 0
BLAST of Lag0017604 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-12 Identity = 68/303 (22.44%), Postives = 119/303 (39.27%), Query Frame = 0
BLAST of Lag0017604 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 5.1e-11 Identity = 31/123 (25.20%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of Lag0017604 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 56.2 bits (134), Expect = 6.9e-08 Identity = 33/110 (30.00%), Postives = 54/110 (49.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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