Lag0014600 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCACTCACCGCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCCTCTCCGCCGCCGCTCTCTCGCCGGCACCTTCGCCAACTCCGCAGGCCGCCCCTTCGCCGCCCTGGAGATGGACCCCCGTCACAAAGCCTCCTCCACCCGCAACACAGTCGCCGCCTCAGACCAAGCCCAGCACTCCACCGTCGTCTTCTCCGGCACCGGCACCGTCGCCCACCCCAGTTCCGCCGGCATCGCCACACCATGCACCGAGTGCACCTCCAGCTTCCCCGCCGCTGCAGAGCCCTTCTCCGTCGTCCATTCCGCCGTCCGATCTACCTCCGTCGTGGATCGGCGGTCCGCCGTCGGAAGCACCGGCGCCATCGAAAGAGAAGAGCAACGCCTTTAGTAACAGATTATCGATCGTTGGATCGGTGGCTATTGGAGCCATGGCTTTAATGGTTTAA ATGCCTCACTCACCGCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCCTCTCCGCCGCCGCTCTCTCGCCGGCACCTTCGCCAACTCCGCAGGCCGCCCCTTCGCCGCCCTGGAGATGGACCCCCGTCACAAAGCCTCCTCCACCCGCAACACAGTCGCCGCCTCAGACCAAGCCCAGCACTCCACCGTCGTCTTCTCCGGCACCGGCACCGTCGCCCACCCCAGTTCCGCCGGCATCGCCACACCATGCACCGAGTGCACCTCCAGCTTCCCCGCCGCTGCAGAGCCCTTCTCCGTCGTCCATTCCGCCGTCCGATCTACCTCCGTCGTGGATCGGCGGTCCGCCGTCGGAAGCACCGGCGCCATCGAAAGAGAAGAGCAACGCCTTTAGTAACAGATTATCGATCGTTGGATCGGTGGCTATTGGAGCCATGGCTTTAATGGTTTAA ATGCCTCACTCACCGCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCCTCTCCGCCGCCGCTCTCTCGCCGGCACCTTCGCCAACTCCGCAGGCCGCCCCTTCGCCGCCCTGGAGATGGACCCCCGTCACAAAGCCTCCTCCACCCGCAACACAGTCGCCGCCTCAGACCAAGCCCAGCACTCCACCGTCGTCTTCTCCGGCACCGGCACCGTCGCCCACCCCAGTTCCGCCGGCATCGCCACACCATGCACCGAGTGCACCTCCAGCTTCCCCGCCGCTGCAGAGCCCTTCTCCGTCGTCCATTCCGCCGTCCGATCTACCTCCGTCGTGGATCGGCGGTCCGCCGTCGGAAGCACCGGCGCCATCGAAAGAGAAGAGCAACGCCTTTAGTAACAGATTATCGATCGTTGGATCGGTGGCTATTGGAGCCATGGCTTTAATGGTTTAA MPHSPLLNALLAAALLLSAAALSPAPSPTPQAAPSPPWRWTPVTKPPPPATQSPPQTKPSTPPSSSPAPAPSPTPVPPASPHHAPSAPPASPPLQSPSPSSIPPSDLPPSWIGGPPSEAPAPSKEKSNAFSNRLSIVGSVAIGAMALMV Homology
BLAST of Lag0014600 vs. NCBI nr
Match: XP_038887113.1 (anther-specific proline-rich protein APG-like [Benincasa hispida]) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-27 Identity = 102/152 (67.11%), Postives = 112/152 (73.68%), Query Frame = 0
BLAST of Lag0014600 vs. NCBI nr
Match: XP_022141995.1 (extensin-like [Momordica charantia]) HSP 1 Score: 111.3 bits (277), Expect = 7.2e-21 Identity = 88/141 (62.41%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of Lag0014600 vs. NCBI nr
Match: XP_011659717.1 (vegetative cell wall protein gp1 [Cucumis sativus] >KGN43745.1 hypothetical protein Csa_017249 [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 8.0e-20 Identity = 87/148 (58.78%), Postives = 98/148 (66.22%), Query Frame = 0
BLAST of Lag0014600 vs. NCBI nr
Match: XP_008462882.1 (PREDICTED: classical arabinogalactan protein 4 [Cucumis melo] >KAA0061156.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa] >TYK29917.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-07 Identity = 84/186 (45.16%), Postives = 98/186 (52.69%), Query Frame = 0
BLAST of Lag0014600 vs. NCBI nr
Match: XP_038877309.1 (vegetative cell wall protein gp1-like [Benincasa hispida]) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05 Identity = 81/185 (43.78%), Postives = 95/185 (51.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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