Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTGAAACTTCTTCTTCTTCTACCCCATCATCTGCACCTCTCTCACAGTCGTTTGAAACTCCCTCAACACCTAACACCACTCCAGTAGTCACTCTGATTCCAGGCTCCGGAACAACACAACGCTTACCAATTCCAAATCCTCTGATTCAGCCTTCGACCAACCCTTCCACCTACCCTTTTGTTCCGCAAAATCAACCTCCAGTTTCTCCTCTACAACCTCAGTTTTTTACCCATCAAATCAGACCTACTTTCGGCCATTTTACCCCTCAAATTTCCCCGCCCACCTGCTGTGTATCCTCAATTTTTTCCTCCCCCAAATTTTCCTTCCAATCCTCAAGCCCCGTCACCTAATCTAGCATTATTTACCCCAAATCCCTACCCAACCTTGCCCCAACCTCTTGCCGTCAAGCTGAATGACAACAATTTTTGCTCTGGAAAAATCAGTTACTGAATGCGGTCTTAGCAAATGGACTTCATGGATTCCTTGATGGTTCAATCTCAGCTCCACCCAAGTTCTTGGATGATCATCAGCTTCAACCGAACCCTGATTTCATTTCCTGGGAAAGGTACAACCGTTTTATAATGTGCTGGATTTATTCGTCCCTCTCTGAAGAAAAGATGTGTGAGATTGTAAGTCTTGAAACTGCATATGATATCTGGAATTCTTTAAAAAAGTCGTATGATTCTAGAACCATTGCTAGGATTATGGGTCTTAAGTCTCAATTACAAAGGATTAAGAAAGATGGTTTTTCCGTCAGTCAATATCTGTCTCAAATTAAGGAGGTCACCGATAAGTTTGCTGCCATAGGGGAACCAATCTCTTATCGAGATCATTTAGCTCACATCCTTGATGGTCTTGGAAGTGAGTACAATGCTTTTGTCACTTCAATTCAGAACCGACCCGATAGCCCTGATTTAGAGGATGTTCGTAGTTTGTTTCTTGCTTACGAAGCTCGGTTGGAAAAACAAAGCAGTGTCGATCAGTTGAATCTTGTTCAAGCGAACCTCAGTAGCGTTCAATTACATAGTAACAACCGTCGTCCCTCTCCTCACCCTGTTCATTTTCCTTCAGCAGCTTCCCAGAGCTCCTTTTAA
mRNA sequence
ATGGCATCTGAAACTTCTTCTTCTTCTACCCCATCATCTGCACCTCTCTCACAGTCGTTTGAAACTCCCTCAACACCTAACACCACTCCAGTAGTCACTCTGATTCCAGGCTCCGGAACAACACAACGCTTACCAATTCCAAATCCTCTGATTCAGCCTTCGACCAACCCTTCCACCTACCCTTTTGTTCCGCAAAATCAACCTCCAGTTTCTCCTCTACAACCTCAGTTTTTTACCCATCAAATCAGACCTACTTTCGGCCATTTTACCCCTCAAATTTCCCCGCCCACCTGCTGTTTACTGAATGCGGTCTTAGCAAATGGACTTCATGGATTCCTTGATGGTTCAATCTCAGCTCCACCCAAGTTCTTGGATGATCATCAGCTTCAACCGAACCCTGATTTCATTTCCTGGGAAAGGTACAACCGTTTTATAATGTGCTGGATTTATTCGTCCCTCTCTGAAGAAAAGATGTGTGAGATTGTAAGTCTTGAAACTGCATATGATATCTGGAATTCTTTAAAAAAGTCGTATGATTCTAGAACCATTGCTAGGATTATGGGTCTTAAGTCTCAATTACAAAGGATTAAGAAAGATGGTTTTTCCGTCAGTCAATATCTGTCTCAAATTAAGGAGGTCACCGATAAGTTTGCTGCCATAGGGGAACCAATCTCTTATCGAGATCATTTAGCTCACATCCTTGATGGTCTTGGAAGTGAGTACAATGCTTTTGTCACTTCAATTCAGAACCGACCCGATAGCCCTGATTTAGAGGATGTTCGTAGTTTGTTTCTTGCTTACGAAGCTCGGTTGGAAAAACAAAGCAGTGTCGATCAGTTGAATCTTGTTCAAGCGAACCTCAGTAGCGTTCAATTACATAGTAACAACCGTCGTCCCTCTCCTCACCCTGTTCATTTTCCTTCAGCAGCTTCCCAGAGCTCCTTTTAA
Coding sequence (CDS)
ATGGCATCTGAAACTTCTTCTTCTTCTACCCCATCATCTGCACCTCTCTCACAGTCGTTTGAAACTCCCTCAACACCTAACACCACTCCAGTAGTCACTCTGATTCCAGGCTCCGGAACAACACAACGCTTACCAATTCCAAATCCTCTGATTCAGCCTTCGACCAACCCTTCCACCTACCCTTTTGTTCCGCAAAATCAACCTCCAGTTTCTCCTCTACAACCTCAGTTTTTTACCCATCAAATCAGACCTACTTTCGGCCATTTTACCCCTCAAATTTCCCCGCCCACCTGCTGTTTACTGAATGCGGTCTTAGCAAATGGACTTCATGGATTCCTTGATGGTTCAATCTCAGCTCCACCCAAGTTCTTGGATGATCATCAGCTTCAACCGAACCCTGATTTCATTTCCTGGGAAAGGTACAACCGTTTTATAATGTGCTGGATTTATTCGTCCCTCTCTGAAGAAAAGATGTGTGAGATTGTAAGTCTTGAAACTGCATATGATATCTGGAATTCTTTAAAAAAGTCGTATGATTCTAGAACCATTGCTAGGATTATGGGTCTTAAGTCTCAATTACAAAGGATTAAGAAAGATGGTTTTTCCGTCAGTCAATATCTGTCTCAAATTAAGGAGGTCACCGATAAGTTTGCTGCCATAGGGGAACCAATCTCTTATCGAGATCATTTAGCTCACATCCTTGATGGTCTTGGAAGTGAGTACAATGCTTTTGTCACTTCAATTCAGAACCGACCCGATAGCCCTGATTTAGAGGATGTTCGTAGTTTGTTTCTTGCTTACGAAGCTCGGTTGGAAAAACAAAGCAGTGTCGATCAGTTGAATCTTGTTCAAGCGAACCTCAGTAGCGTTCAATTACATAGTAACAACCGTCGTCCCTCTCCTCACCCTGTTCATTTTCCTTCAGCAGCTTCCCAGAGCTCCTTTTAA
Protein sequence
MASETSSSSTPSSAPLSQSFETPSTPNTTPVVTLIPGSGTTQRLPIPNPLIQPSTNPSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGHFTPQISPPTCCLLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQLNLVQANLSSVQLHSNNRRPSPHPVHFPSAASQSSF
Homology
BLAST of Lag0012184 vs. NCBI nr
Match:
XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])
HSP 1 Score: 310.8 bits (795), Expect = 1.3e-80
Identity = 166/279 (59.50%), Postives = 199/279 (71.33%), Query Frame = 0
Query: 45 PIPNPLIQPSTNPSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGHFTPQISPPTCCLLNAV 104
P PN L QP S PF QP L F LLNAV
Sbjct: 6 PTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQ---------------LLNAV 65
Query: 105 LANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSL 164
+ANGL G+LDG+I PP+FLD HQLQPNP + +WERYNR +MCWIYSSLSEEKM E+VSL
Sbjct: 66 IANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSL 125
Query: 165 ETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPI 224
ET +DIW+SL + YDS+T ARIMGLK++LQ ++KDG SVSQYL++IKE+ DKFAA+GEP+
Sbjct: 126 ETTHDIWSSLTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPL 185
Query: 225 SYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQLNLVQ 284
SYRDHLAH+LDGLGSEYNAFVTSI NR DSP LEDVRSL LAYEARL+KQ++VDQLN+ Q
Sbjct: 186 SYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQ 245
Query: 285 ANLSSVQLHSNNRRPSP---HPVHF-------PSAASQS 314
ANL ++ L N++RP P P H+ P +A+QS
Sbjct: 246 ANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISAAQS 269
BLAST of Lag0012184 vs. NCBI nr
Match:
RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 198.4 bits (503), Expect = 9.5e-47
Identity = 99/187 (52.94%), Postives = 127/187 (67.91%), Query Frame = 0
Query: 100 LLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMC 159
LLN ++ANGL F+D S+PPK+LD Q NP+F+ W+R N+ +M WIYSSL+ +
Sbjct: 56 LLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEFVQWDRLNQLVMSWIYSSLTPGMVG 115
Query: 160 EIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAA 219
+IV TA DIW SL Y+S +IA +M L SQLQRIKK +S+YLS++K V D+FA
Sbjct: 116 QIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQRIKKIDIPLSEYLSRLKFVFDEFAT 175
Query: 220 IGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQ 279
IGEP+SYRD L IL+GL EY+ FVTSI NR D P L++V SL YE RL ++S
Sbjct: 176 IGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRPSLQEVHSLLHTYEYRLSQRSMDQN 235
Query: 280 LNLVQAN 287
LN QAN
Sbjct: 236 LNFPQAN 242
BLAST of Lag0012184 vs. NCBI nr
Match:
PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])
HSP 1 Score: 194.9 bits (494), Expect = 1.0e-45
Identity = 110/269 (40.89%), Postives = 168/269 (62.45%), Query Frame = 0
Query: 48 NPLIQ-PSTN-PSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGH-FTPQISPPTCC----- 107
NP IQ P TN P+ + QPP+ PL I P+ FT ++
Sbjct: 15 NPTIQMPPTNIPNVQDQIIGAQPPLPPL-------PILPSMNQPFTIKLDADNYLIWKNQ 74
Query: 108 LLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMC 167
LLN ++ANGL F+DGS PP+F D + N ++I+W+R+NR IM WIY+SL++ M
Sbjct: 75 LLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMG 134
Query: 168 EIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAA 227
+IV +A++IW +L + Y S ++A+I L+++LQ ++KDG + +Y+ + K + + AA
Sbjct: 135 QIVGYASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAA 194
Query: 228 IGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQ 287
+GEP+S +DHL ++ GL EYNAFVTSI RPD+ LE++ SL L+YE RLE Q++ Q
Sbjct: 195 VGEPVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQ 254
Query: 288 LNLVQANLSSVQLHSNNRRPS-PHPV-HF 307
L+ +QANL+ + ++ RP+ +PV HF
Sbjct: 255 LSSLQANLAHLNINKKPYRPNFSNPVGHF 276
BLAST of Lag0012184 vs. NCBI nr
Match:
GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])
HSP 1 Score: 182.2 bits (461), Expect = 7.0e-42
Identity = 110/278 (39.57%), Postives = 156/278 (56.12%), Query Frame = 0
Query: 2 ASETSSSSTPSSAPLSQSFETPSTPNTTPVVTLIPGSGTTQRLPIPNPLIQPSTNPSTYP 61
+S T S+STP + P P T N P + +P PNP I N S P
Sbjct: 3 SSTTDSASTPPAPP-------PPTSNPLP----------SSSIPNPNPQI---LNTSPLP 62
Query: 62 FVPQ-NQPPVSPLQPQFFTHQIRPTFGHFTPQISPPTCCLLNAVLANGLHGFLDGSISAP 121
+P NQP L + LLN V+ANGL FLDGS P
Sbjct: 63 NMPSINQPLAVKLDDHNYIIWKEQ---------------LLNIVIANGLEEFLDGSRVCP 122
Query: 122 PKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSLETAYDIWNSLKKSYDS 181
P+FLD Q Q NP+F SW+RYNR +M WIY+S++E + +IV +A IW +L++ Y +
Sbjct: 123 PRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAA 182
Query: 182 RTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPISYRDHLAHILDGLGSE 241
+ A + L++ LQ IKK+G + Y+ + + + + A+IGEP++Y DHL + L GLG +
Sbjct: 183 ASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRD 242
Query: 242 YNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVD 279
YN FVTSIQ++ P +E+V SL L+Y+ARLE+QS+ D
Sbjct: 243 YNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQSATD 245
BLAST of Lag0012184 vs. NCBI nr
Match:
RVX14312.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 179.9 bits (455), Expect = 3.5e-41
Identity = 83/199 (41.71%), Postives = 136/199 (68.34%), Query Frame = 0
Query: 100 LLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMC 159
+LN ++ANGL + G I AP +FL D + NP++ W+R NR +MCWIYSSL+E M
Sbjct: 45 MLNIIIANGLEEMIHGKIPAPSRFLGDSE-NINPEYSIWQRQNRLVMCWIYSSLTEGVMA 104
Query: 160 EIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAA 219
+I+ L+TA +IW +L+K + + + ARIM L+ QLQ KK G S+ +YL +IK + D A
Sbjct: 105 QIIGLDTASEIWTALEKIFSAASKARIMQLRFQLQTTKKRGLSMMEYLLKIKSIVDNLLA 164
Query: 220 IGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQ 279
IGE I+ +D + ++L GLG+EYN+FV ++ + + LE++ S+ L +E +LE+Q ++
Sbjct: 165 IGENITEQDRILYLLAGLGAEYNSFVITVTSGHEPLSLEEIHSMLLTHENQLEQQHITEE 224
Query: 280 LNLVQANLSSVQLHSNNRR 299
NL+QAN++++ + +N++
Sbjct: 225 TNLLQANITTMNIQGHNKK 242
BLAST of Lag0012184 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = 0
Query: 109 LHGFLDGSISAPPKFL-DDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSLETA 168
L GFLDGS + PP + D + NPD+ W+R ++ I + ++S + TA
Sbjct: 47 LAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTA 106
Query: 169 YDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPISYR 228
IW +L+K Y + + + L++QL++ K ++ Y+ + D+ A +G+P+ +
Sbjct: 107 AQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHD 166
Query: 229 DHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSS 277
+ + +L+ L EY + I + P L ++ L +E+++ SS
Sbjct: 167 EQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSS 215
BLAST of Lag0012184 vs. ExPASy TrEMBL
Match:
A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 6.3e-81
Identity = 166/279 (59.50%), Postives = 199/279 (71.33%), Query Frame = 0
Query: 45 PIPNPLIQPSTNPSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGHFTPQISPPTCCLLNAV 104
P PN L QP S PF QP L F LLNAV
Sbjct: 6 PTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQ---------------LLNAV 65
Query: 105 LANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSL 164
+ANGL G+LDG+I PP+FLD HQLQPNP + +WERYNR +MCWIYSSLSEEKM E+VSL
Sbjct: 66 IANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSL 125
Query: 165 ETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPI 224
ET +DIW+SL + YDS+T ARIMGLK++LQ ++KDG SVSQYL++IKE+ DKFAA+GEP+
Sbjct: 126 ETTHDIWSSLTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPL 185
Query: 225 SYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQLNLVQ 284
SYRDHLAH+LDGLGSEYNAFVTSI NR DSP LEDVRSL LAYEARL+KQ++VDQLN+ Q
Sbjct: 186 SYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQ 245
Query: 285 ANLSSVQLHSNNRRPSP---HPVHF-------PSAASQS 314
ANL ++ L N++RP P P H+ P +A+QS
Sbjct: 246 ANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISAAQS 269
BLAST of Lag0012184 vs. ExPASy TrEMBL
Match:
A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 4.6e-47
Identity = 99/187 (52.94%), Postives = 127/187 (67.91%), Query Frame = 0
Query: 100 LLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMC 159
LLN ++ANGL F+D S+PPK+LD Q NP+F+ W+R N+ +M WIYSSL+ +
Sbjct: 56 LLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEFVQWDRLNQLVMSWIYSSLTPGMVG 115
Query: 160 EIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAA 219
+IV TA DIW SL Y+S +IA +M L SQLQRIKK +S+YLS++K V D+FA
Sbjct: 116 QIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQRIKKIDIPLSEYLSRLKFVFDEFAT 175
Query: 220 IGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQ 279
IGEP+SYRD L IL+GL EY+ FVTSI NR D P L++V SL YE RL ++S
Sbjct: 176 IGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRPSLQEVHSLLHTYEYRLSQRSMDQN 235
Query: 280 LNLVQAN 287
LN QAN
Sbjct: 236 LNFPQAN 242
BLAST of Lag0012184 vs. ExPASy TrEMBL
Match:
A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 5.1e-46
Identity = 110/269 (40.89%), Postives = 168/269 (62.45%), Query Frame = 0
Query: 48 NPLIQ-PSTN-PSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGH-FTPQISPPTCC----- 107
NP IQ P TN P+ + QPP+ PL I P+ FT ++
Sbjct: 15 NPTIQMPPTNIPNVQDQIIGAQPPLPPL-------PILPSMNQPFTIKLDADNYLIWKNQ 74
Query: 108 LLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMC 167
LLN ++ANGL F+DGS PP+F D + N ++I+W+R+NR IM WIY+SL++ M
Sbjct: 75 LLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMG 134
Query: 168 EIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAA 227
+IV +A++IW +L + Y S ++A+I L+++LQ ++KDG + +Y+ + K + + AA
Sbjct: 135 QIVGYASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAA 194
Query: 228 IGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVDQ 287
+GEP+S +DHL ++ GL EYNAFVTSI RPD+ LE++ SL L+YE RLE Q++ Q
Sbjct: 195 VGEPVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQ 254
Query: 288 LNLVQANLSSVQLHSNNRRPS-PHPV-HF 307
L+ +QANL+ + ++ RP+ +PV HF
Sbjct: 255 LSSLQANLAHLNINKKPYRPNFSNPVGHF 276
BLAST of Lag0012184 vs. ExPASy TrEMBL
Match:
A0A803NL56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42
Identity = 103/283 (36.40%), Postives = 163/283 (57.60%), Query Frame = 0
Query: 45 PIPNPLIQPSTNPSTYPFVPQNQPPVSPLQPQFFTHQIRPTFGHFTPQISPP-------- 104
PI NP I + NP+T P + SP P P F F IS
Sbjct: 21 PIQNPTITNTQNPNTTAAPPISASSSSPSLP--------PNFSSFNQTISVKLDDTNYLV 80
Query: 105 -TCCLLNAVLANGLHGFLDGSISAPPKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSE 164
+ N ++ANGL G++DG+++ +F + Q +P F +W RYN+ +M W+Y+SLS+
Sbjct: 81 WRMQMQNIIIANGLEGYIDGTVACSAQFPNSTSSQVDPAFTTWHRYNQLLMSWLYASLSD 140
Query: 165 EKMCEIVSLETAYDIWNSLKKSYDSRTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTD 224
+ +IV TA +IW SL+++Y + + AR + LQ +KKD + S YL ++K + +
Sbjct: 141 SMLGQIVGFTTATEIWVSLERTYSATSFARSFDFRMALQNLKKDRLNASAYLQKLKTLCN 200
Query: 225 KFAAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQS 284
A++G+PIS ++HL ++L+GLG EYNAFVT I RP P +E+V +L L+YEARLE+Q+
Sbjct: 201 TLASVGDPISSQEHLTYLLNGLGLEYNAFVTPILARPVKPTIEEVHALLLSYEARLERQN 260
Query: 285 SVDQLNLVQANLSSVQL-----HSNNRRPSPHPVHFPSAASQS 314
+ + +QAN +++ S++++PS P FPS Q+
Sbjct: 261 AAASPSSLQANFANLSFPKQRPKSSSQQPSSQP-RFPSHPQQN 294
BLAST of Lag0012184 vs. ExPASy TrEMBL
Match:
A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 3.4e-42
Identity = 110/278 (39.57%), Postives = 156/278 (56.12%), Query Frame = 0
Query: 2 ASETSSSSTPSSAPLSQSFETPSTPNTTPVVTLIPGSGTTQRLPIPNPLIQPSTNPSTYP 61
+S T S+STP + P P T N P + +P PNP I N S P
Sbjct: 3 SSTTDSASTPPAPP-------PPTSNPLP----------SSSIPNPNPQI---LNTSPLP 62
Query: 62 FVPQ-NQPPVSPLQPQFFTHQIRPTFGHFTPQISPPTCCLLNAVLANGLHGFLDGSISAP 121
+P NQP L + LLN V+ANGL FLDGS P
Sbjct: 63 NMPSINQPLAVKLDDHNYIIWKEQ---------------LLNIVIANGLEEFLDGSRVCP 122
Query: 122 PKFLDDHQLQPNPDFISWERYNRFIMCWIYSSLSEEKMCEIVSLETAYDIWNSLKKSYDS 181
P+FLD Q Q NP+F SW+RYNR +M WIY+S++E + +IV +A IW +L++ Y +
Sbjct: 123 PRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAA 182
Query: 182 RTIARIMGLKSQLQRIKKDGFSVSQYLSQIKEVTDKFAAIGEPISYRDHLAHILDGLGSE 241
+ A + L++ LQ IKK+G + Y+ + + + + A+IGEP++Y DHL + L GLG +
Sbjct: 183 ASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRD 242
Query: 242 YNAFVTSIQNRPDSPDLEDVRSLFLAYEARLEKQSSVD 279
YN FVTSIQ++ P +E+V SL L+Y+ARLE+QS+ D
Sbjct: 243 YNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQSATD 245
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155181.1 | 1.3e-80 | 59.50 | uncharacterized protein LOC111022315 [Momordica charantia] | [more] |
RVW69807.1 | 9.5e-47 | 52.94 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
PON47862.1 | 1.0e-45 | 40.89 | hypothetical protein TorRG33x02_321990 [Trema orientale] | [more] |
GFY85402.1 | 7.0e-42 | 39.57 | hypothetical protein Acr_04g0001400 [Actinidia rufa] | [more] |
RVX14312.1 | 3.5e-41 | 41.71 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 1.5e-15 | 26.04 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DQX7 | 6.3e-81 | 59.50 | uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A438GC62 | 4.6e-47 | 52.94 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
A0A2P5BGF8 | 5.1e-46 | 40.89 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV... | [more] |
A0A803NL56 | 1.5e-42 | 36.40 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J0EGI5 | 3.4e-42 | 39.57 | Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |