Lag0004022 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCATTCTTTTCAAGCGCTGTAGACGAAGGAGCCACAAGCCCTCATGTTCTGGTTTTCCAATCCCCCAACGACTGGGAAGCTCACTTCGACAACTCCAAGAAAACTAATAAACTGGTGCCTGATCTTTTTATTATTTTACAATCTGATCTTTTAATTTATACCCCTTTTTTTTTCTTGTAATTATATATATATATATATATATATATTTATCTTTTTGTTGGTTCATTGAAAGCTTGTGATAGATTTCAAAGCTTCTTGGTGCGGACCCTGTCAGTTTATGAAGCCCATATTCGCAGCCTTTGCTTCCAAGTACAAACATGTTGAATTCATTGAGATCGATGTCGATAAATTTAGTGTAAACCTCAGTCTCACTTACCTTACTATTATTCGTTTTATTTCTACGTTTTTAGATAATAGATATAAGGATTATTATGTTAAAGAGGTTAAATAACAAATTTAGTCAAAGCAATTTTAAAATATAGTTTATGATACTATTCATAGAGGACCCCGAATAGAGGAAACTTTAGAAAACTTAGGATGTAGATGACTAACAAACCAAATCGTAAGTCAACTCGAGTATGACTCAATTGGTTGAGTCATATATGCTTAATTAGCTAAGTGATAAAATGTTTGAATTCATCGGCCTCAAATGTTGTTGTTGAACTCGAAAAAAAAATCCCTTAAAGAAGTAATGAATAAAGTTTTACTTTTTTGGGTTTATAAACATACTCTTTTTAACCTATGCATTAAGTTAATTTCTTTTTACTAATTTGCAGGATGTGGCTAAAGAATTTGGGGTGACGCAGATGCCAACATTCCTACTAATTAAACAAGGGAAAGTGGTTGATAGTGTGGTTGGTGCAAAGAAGAATGAGCTCCAACAAGCAATTGAAACTCACACGGATTAA ATGGGATCATTCTTTTCAAGCGCTGTAGACGAAGGAGCCACAAGCCCTCATGTTCTGGTTTTCCAATCCCCCAACGACTGGGAAGCTCACTTCGACAACTCCAAGAAAACTAATAAACTGCTTGTGATAGATTTCAAAGCTTCTTGGTGCGGACCCTGTCAGTTTATGAAGCCCATATTCGCAGCCTTTGCTTCCAAGTACAAACATGTTGAATTCATTGAGATCGATGTCGATAAATTTAGTGATGTGGCTAAAGAATTTGGGGTGACGCAGATGCCAACATTCCTACTAATTAAACAAGGGAAAGTGGTTGATAGTGTGGTTGGTGCAAAGAAGAATGAGCTCCAACAAGCAATTGAAACTCACACGGATTAA ATGGGATCATTCTTTTCAAGCGCTGTAGACGAAGGAGCCACAAGCCCTCATGTTCTGGTTTTCCAATCCCCCAACGACTGGGAAGCTCACTTCGACAACTCCAAGAAAACTAATAAACTGCTTGTGATAGATTTCAAAGCTTCTTGGTGCGGACCCTGTCAGTTTATGAAGCCCATATTCGCAGCCTTTGCTTCCAAGTACAAACATGTTGAATTCATTGAGATCGATGTCGATAAATTTAGTGATGTGGCTAAAGAATTTGGGGTGACGCAGATGCCAACATTCCTACTAATTAAACAAGGGAAAGTGGTTGATAGTGTGGTTGGTGCAAAGAAGAATGAGCTCCAACAAGCAATTGAAACTCACACGGATTAA MGSFFSSAVDEGATSPHVLVFQSPNDWEAHFDNSKKTNKLLVIDFKASWCGPCQFMKPIFAAFASKYKHVEFIEIDVDKFSDVAKEFGVTQMPTFLLIKQGKVVDSVVGAKKNELQQAIETHTD Homology
BLAST of Lag0004022 vs. NCBI nr
Match: KAB1220726.1 (Thioredoxin H2 [Morella rubra]) HSP 1 Score: 154.8 bits (390), Expect = 4.7e-34 Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of Lag0004022 vs. NCBI nr
Match: XP_020238958.1 (thioredoxin H3 [Cajanus cajan] >XP_020238959.1 thioredoxin H3 [Cajanus cajan] >KYP43005.1 Thioredoxin H-type 2 [Cajanus cajan]) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 67/105 (63.81%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of Lag0004022 vs. NCBI nr
Match: PHU27650.1 (Thioredoxin H2 [Capsicum chinense]) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 0
BLAST of Lag0004022 vs. NCBI nr
Match: XP_016561441.1 (PREDICTED: thioredoxin H2 [Capsicum annuum] >KAF3634196.1 Thioredoxin H2 [Capsicum annuum] >KAF3636953.1 Thioredoxin H2 [Capsicum annuum] >PHT91831.1 Thioredoxin H2 [Capsicum annuum]) HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0
BLAST of Lag0004022 vs. NCBI nr
Match: PHT57211.1 (Thioredoxin H2 [Capsicum baccatum]) HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0
BLAST of Lag0004022 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 8.1e-29 Identity = 53/102 (51.96%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of Lag0004022 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-25 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Lag0004022 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 6.0e-24 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of Lag0004022 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.9e-24 Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Lag0004022 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23 Identity = 48/115 (41.74%), Postives = 76/115 (66.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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