IVF0015585 (gene) Melon (IVF77) v1

Overview


Name	IVF0015585
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	WRKY domain-containing protein
Location	tig00195367: 109113 .. 109565 (-)
RNA-Seq Expression	IVF0015585
Synteny	IVF0015585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA

mRNA sequence

ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA

Coding sequence (CDS)

ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA

Protein sequence

MTILSYLNLIIIIIITVFPSFEVLGHPNYGTVTTTVAAISSLGLVNNGTYGTQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTHRIALLDAQEEQEEEQEEEGEEVDESSAKKRGRSVEAEMC

Homology

[Close]

BLAST of IVF0015585 vs. ExPASy TrEMBL
Match: A0A5D3D3H9 (Putative WRKY transcription factor 46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005380 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21
Identity = 68/90 (75.56%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH
Sbjct: 14  TQGKELALQLRTHFHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 142
           RIALLDAQEEQEEEQEEEGEEVDESSAKK+
Sbjct: 74  RIALLDAQEEQEEEQEEEGEEVDESSAKKK 95

[Close]

BLAST of IVF0015585 vs. ExPASy TrEMBL
Match: A0A1S3AVR5 (probable WRKY transcription factor 46 OS=Cucumis melo OX=3656 GN=LOC103483201 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.0e-21
Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH
Sbjct: 14  TQGKELALQLRTHFHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 142
           +IALLDAQEEQEEEQEEEGEEVDESSAKK+
Sbjct: 74  QIALLDAQEEQEEEQEEEGEEVDESSAKKK 95

[Close]

BLAST of IVF0015585 vs. ExPASy TrEMBL
Match: A0A0A0L772 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119700 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.3e-14
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSN KTH
Sbjct: 14  TQGKELALQLRTHLHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNLKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 142
           +I+ LD QE +EEE+EE  EEV+ESS KK+
Sbjct: 74  QISSLDEQEGEEEEEEE--EEVEESSTKKK 93

[Close]

BLAST of IVF0015585 vs. ExPASy TrEMBL
Match: B6DQ60 (Putative WRKY transcription factor 30 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 79  PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTHRIALLDAQEEQEEEQEEEGEEVDESSA 138
           PEQACLFLTEMIQSSFEKALLLLNFNSSN KTH+I+  D QE +EEE+EE  EEV+ESS 
Sbjct: 19  PEQACLFLTEMIQSSFEKALLLLNFNSSNLKTHQISSWDEQEGEEEEEEE--EEVEESST 78

Query: 139 KKR 142
           KK+
Sbjct: 79  KKK 79

[Close]

BLAST of IVF0015585 vs. ExPASy TrEMBL
Match: A0A6J1E8E9 (probable WRKY transcription factor 41 OS=Cucurbita moschata OX=3662 GN=LOC111431792 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.7e-04
Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNS--- 111
           TQ  +L +  R    PS+ +S      P + C FLTEMI SSFEKALLLL FNSS+S   
Sbjct: 13  TQGKELALQLRTHLHPSSSSS------PAEPCFFLTEMIHSSFEKALLLLKFNSSSSIMP 72

Query: 112 --KTHRIALLDAQEEQEEEQEEEGEEVDESSAKKRGRSV 146
              TH+IA +          EEEGE     + +K  R V
Sbjct: 73  DPTTHKIASV----------EEEGEGEPRKNKRKNSRDV 95

[Close]

BLAST of IVF0015585 vs. NCBI nr
Match: TYK17666.1 (putative WRKY transcription factor 46 [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (274), Expect = 1.23e-25
Identity = 68/90 (75.56%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH
Sbjct: 14  TQGKELALQLRTHFHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 141
           RIALLDAQEEQEEEQEEEGEEVDESSAKK+
Sbjct: 74  RIALLDAQEEQEEEQEEEGEEVDESSAKKK 95

[Close]

BLAST of IVF0015585 vs. NCBI nr
Match: XP_008437915.1 (PREDICTED: probable WRKY transcription factor 46 [Cucumis melo])

HSP 1 Score: 108 bits (270), Expect = 4.70e-25
Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH
Sbjct: 14  TQGKELALQLRTHFHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 141
           +IALLDAQEEQEEEQEEEGEEVDESSAKK+
Sbjct: 74  QIALLDAQEEQEEEQEEEGEEVDESSAKKK 95

[Close]

BLAST of IVF0015585 vs. NCBI nr
Match: XP_011650695.1 (probable WRKY transcription factor 46 [Cucumis sativus] >KGN56437.1 hypothetical protein Csa_011714 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 3.68e-16
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTH 111
           TQ  +L +  R    PS+         PEQACLFLTEMIQSSFEKALLLLNFNSSN KTH
Sbjct: 14  TQGKELALQLRTHLHPSSS--------PEQACLFLTEMIQSSFEKALLLLNFNSSNLKTH 73

Query: 112 RIALLDAQEEQEEEQEEEGEEVDESSAKKR 141
           +I+ LD QE +EEE+EEE  EV+ESS KK+
Sbjct: 74  QISSLDEQEGEEEEEEEE--EVEESSTKKK 93

[Close]

BLAST of IVF0015585 vs. NCBI nr
Match: ACI16506.1 (putative WRKY transcription factor 30, partial [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 5.17e-16
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 79  PEQACLFLTEMIQSSFEKALLLLNFNSSNSKTHRIALLDAQEEQEEEQEEEGEEVDESSA 138
           PEQACLFLTEMIQSSFEKALLLLNFNSSN KTH+I+  D QE +EEE+EEE  EV+ESS 
Sbjct: 19  PEQACLFLTEMIQSSFEKALLLLNFNSSNLKTHQISSWDEQEGEEEEEEEE--EVEESST 78

Query: 139 KKR 141
           KK+
Sbjct: 79  KKK 79

[Close]

BLAST of IVF0015585 vs. NCBI nr
Match: XP_023526723.1 (probable WRKY transcription factor 41 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.3 bits (142), Expect = 4.93e-07
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 52  TQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNS--- 111
           TQ  +L +  R    PS+ +S      P + C FLTEMIQSSFEKALLLL FNSS+S   
Sbjct: 13  TQGKELALQLRTHLHPSSSSS------PAEPCFFLTEMIQSSFEKALLLLKFNSSSSIMP 72

Query: 112 --KTHRIALLDAQEEQEE 124
              TH+IA ++ +EE+EE
Sbjct: 73  DPTTHKIASVEEEEEEEE 84

The following BLAST results are available for this feature:

BLAST of IVF0015585 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015585 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3H9	2.1e-21	75.56	Putative WRKY transcription factor 46 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AVR5	6.0e-21	74.44	probable WRKY transcription factor 46 OS=Cucumis melo OX=3656 GN=LOC103483201 PE...	[more]
A0A0A0L772	9.3e-14	62.22	WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119700 PE=4 S...	[more]
B6DQ60	1.3e-12	77.78	Putative WRKY transcription factor 30 (Fragment) OS=Cucumis sativus OX=3659 PE=2...	[more]
A0A6J1E8E9	8.7e-04	42.42	probable WRKY transcription factor 41 OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]

BLAST of IVF0015585 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17666.1	1.23e-25	75.56	putative WRKY transcription factor 46 [Cucumis melo var. makuwa]	[more]
XP_008437915.1	4.70e-25	74.44	PREDICTED: probable WRKY transcription factor 46 [Cucumis melo]	[more]
XP_011650695.1	3.68e-16	62.22	probable WRKY transcription factor 46 [Cucumis sativus] >KGN56437.1 hypothetical...	[more]
ACI16506.1	5.17e-16	77.78	putative WRKY transcription factor 30, partial [Cucumis sativus]	[more]
XP_023526723.1	4.93e-07	50.00	probable WRKY transcription factor 41 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0015585 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015585.2	IVF0015585.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding