IVF0015585.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA ATGACCATATTATCCTACCTAAATCTTATTATTATTATTATTATTACTGTTTTTCCATCTTTTGAGGTTTTGGGTCATCCCAACTACGGGACTGTCACCACCACCGTCGCTGCCATTTCTTCTTTGGGATTGGTTAACAATGGAACTTATGGAACACAACAGTTTGATCTCCGAGTTGACTCAAGGGAAGGAACTCGCCCTTCAACTCAGAACTCATTTTCATCCTTCTTCATCCCCGAACAAGCTTGCCTTTTCTTGACTGAAATGATTCAATCTTCTTTCGAGAAAGCACTTTTGCTTCTCAATTTCAATTCTTCTAATTCAAAAACCCACCGAATTGCTTTGTTGGATGCACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGGAGAAGAAGTGGATGAATCATCCGCTAAGAAAAGAGGAAGATCAGTAGAAGCAGAGATGTGTTGA MTILSYLNLIIIIIITVFPSFEVLGHPNYGTVTTTVAAISSLGLVNNGTYGTQQFDLRVDSREGTRPSTQNSFSSFFIPEQACLFLTEMIQSSFEKALLLLNFNSSNSKTHRIALLDAQEEQEEEQEEEGEEVDESSAKKRGRSVEAEMC Homology
BLAST of IVF0015585.2 vs. ExPASy TrEMBL
Match: A0A5D3D3H9 (Putative WRKY transcription factor 46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005380 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 68/90 (75.56%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of IVF0015585.2 vs. ExPASy TrEMBL
Match: A0A1S3AVR5 (probable WRKY transcription factor 46 OS=Cucumis melo OX=3656 GN=LOC103483201 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 6.0e-21 Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of IVF0015585.2 vs. ExPASy TrEMBL
Match: A0A0A0L772 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119700 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 9.3e-14 Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of IVF0015585.2 vs. ExPASy TrEMBL
Match: B6DQ60 (Putative WRKY transcription factor 30 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12 Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of IVF0015585.2 vs. ExPASy TrEMBL
Match: A0A6J1E8E9 (probable WRKY transcription factor 41 OS=Cucurbita moschata OX=3662 GN=LOC111431792 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 8.7e-04 Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of IVF0015585.2 vs. NCBI nr
Match: TYK17666.1 (putative WRKY transcription factor 46 [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (274), Expect = 1.23e-25 Identity = 68/90 (75.56%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of IVF0015585.2 vs. NCBI nr
Match: XP_008437915.1 (PREDICTED: probable WRKY transcription factor 46 [Cucumis melo]) HSP 1 Score: 108 bits (270), Expect = 4.70e-25 Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of IVF0015585.2 vs. NCBI nr
Match: XP_011650695.1 (probable WRKY transcription factor 46 [Cucumis sativus] >KGN56437.1 hypothetical protein Csa_011714 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 3.68e-16 Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of IVF0015585.2 vs. NCBI nr
Match: ACI16506.1 (putative WRKY transcription factor 30, partial [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 5.17e-16 Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of IVF0015585.2 vs. NCBI nr
Match: XP_023526723.1 (probable WRKY transcription factor 41 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 59.3 bits (142), Expect = 4.93e-07 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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