IVF0001179 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACTATGCTAGAGAAAGTTCAAGCTGAGAATGCCAAACTTAAGCAGATAGTATCTCAACAGCAAGAACAGCTGGGAAAGTTCACGAAAAATAAAGATCAATTGTCCTTCACGGTCTCTAACCTTACCTCTCTACTTATCACGCAGTCTGATTTGATGTGGCAGATAGGCGAGGGACGTGATAGTCAGTTTAGAGCTTCCATGGAGTATACTCATGCAGTGTTTGTCCAACGTGTGCCTCAACCTGTCATTCTGCTTGAACTAGAAGCACCTTCCCCACCTATTCAACAAGAAAATCTTGGCGCCCCTGACCCCTGCAATAAGAACTAA ATGACAACTATGCTAGAGAAAGTTCAAGCTGAGAATGCCAAACTTAAGCAGATAGTATCTCAACAGCAAGAACAGCTGGGAAAGTTCACGAAAAATAAAGATCAATTGTCCTTCACGGTCTCTAACCTTACCTCTCTACTTATCACGCAGTCTGATTTGATGTGGCAGATAGGCGAGGGACGTGATAGTCAGTTTAGAGCTTCCATGGAGTATACTCATGCAGTGTTTGTCCAACGTGTGCCTCAACCTGTCATTCTGCTTGAACTAGAAGCACCTTCCCCACCTATTCAACAAGAAAATCTTGGCGCCCCTGACCCCTGCAATAAGAACTAA ATGACAACTATGCTAGAGAAAGTTCAAGCTGAGAATGCCAAACTTAAGCAGATAGTATCTCAACAGCAAGAACAGCTGGGAAAGTTCACGAAAAATAAAGATCAATTGTCCTTCACGGTCTCTAACCTTACCTCTCTACTTATCACGCAGTCTGATTTGATGTGGCAGATAGGCGAGGGACGTGATAGTCAGTTTAGAGCTTCCATGGAGTATACTCATGCAGTGTTTGTCCAACGTGTGCCTCAACCTGTCATTCTGCTTGAACTAGAAGCACCTTCCCCACCTATTCAACAAGAAAATCTTGGCGCCCCTGACCCCTGCAATAAGAACTAA MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDPCNKN Homology
BLAST of IVF0001179 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.2e-24 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of IVF0001179 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.2e-24 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of IVF0001179 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of IVF0001179 vs. ExPASy TrEMBL
Match: A0A5A7UH00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001880 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-08 Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of IVF0001179 vs. ExPASy TrEMBL
Match: A0A5D3CKB6 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001600 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.8e-05 Identity = 30/53 (56.60%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of IVF0001179 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 5.22e-30 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of IVF0001179 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 1.87e-29 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of IVF0001179 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 2.78e-11 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of IVF0001179 vs. NCBI nr
Match: KAA0054434.1 (hypothetical protein E6C27_scaffold24G001880 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 3.95e-11 Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of IVF0001179 vs. NCBI nr
Match: KAA0041154.1 (hypothetical protein E6C27_scaffold128G00750 [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 1.51e-06 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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