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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATCCTGGGTCTAAAAAAACTTTGCCCCAATTTTTATCATCTTGATGATGAAGAAAATGAAAAGCACTCACCATTCCCAAGCAAAGGTACTTTACAGAAATACCAGCGGACATCACCACCATCGGAAGGACTCCTCGTCTGTGCAAGATACTTCTGCCTACCTTCGCAGTGCTCGATCACATCCTCCAATTTTGCAATGTTAGATGGCGTGTTTTTTAGTGAATCAGGGGACGCTTCTGGAACTTCAACAGAACCTATAGCTGCCGAAATCAACATGTCATCGCCACCCATATCTTTCGAACTATTTACATCCATTCCGCCGTCTGATAGAATAACTTTTGCCTCGGAACCTATCACTAAGAAAGAGGTTCCGAAGCAATTACAGGGCAGGTTAGCTCAGAAGATTGAGGAAGTTTTCTTCCGTCAAGAAAATCCTTCGACAACCCAGAAACACAACCACATAACGTAACAATTAAGAAGACCAAACACAGAAGGCACCTAATTGAAGTACCACACACGCCTTCCTGCAGAGCAATTTGGAATTGCGAAACGGAGTTTGGCTGGTGTGGTTTAAGAGCTTCGCTTCATCAAACACAATGTAGAAAGGCTGGAATGAGACCACGTCCAGTTCCAGATGGCTCCTGGCGAATACGGGAATCAATAGCCATTGAGATCATTGCAGTGCATGTTCGATCCAAGGGAATCGCGGAGAGAGCTTCGGTGGGGAGAAGGATGGCGGTGGGCTATGGCGGTGACTTCTGGTGCGGTTTTAGACAGGCGGTGACGACAGACGCAACGGCAGCGGTGCGGTGGTTAAAAAATTGA mRNA sequence ATGATCCTGGGTCTAAAAAAACTTTGCCCCAATTTTTATCATCTTGATGATGAAGAAAATGAAAAGCACTCACCATTCCCAAGCAAAGGTACTTTACAGAAATACCAGCGGACATCACCACCATCGGAAGGACTCCTCGTCTGTGCAAGATACTTCTGCCTACCTTCGCAGTGCTCGATCACATCCTCCAATTTTGCAATGTTAGATGGCGTGTTTTTTAGTGAATCAGGGGACGCTTCTGGAACTTCAACAGAACCTATAGCTGCCGAAATCAACATGTCATCGCCACCCATATCTTTCGAACTATTTACATCCATTCCGCCGTCTGATAGAATAACTTTTGCCTCGGAACCTATCACTAAGAAAGAGGTTCCGAAGCAATTACAGGGCAGGTTAGCTCAGAAGATTGAGGAAGTTTTCTTCCGTCAAGAAAATCCTTCGACAACCCAGAAACACAACCACATAACAGCAATTTGGAATTGCGAAACGGAGTTTGGCTGGTGTGGTTTAAGAGCTTCGCTTCATCAAACACAATGTAGAAAGGCTGGAATGAGACCACGTCCAGTTCCAGATGGCTCCTGGCGAATACGGGAATCAATAGCCATTGAGATCATTGCAGTGCATGTTCGATCCAAGGGAATCGCGGAGAGAGCTTCGGTGGGGAGAAGGATGGCGGTGGGCTATGGCGGTGACTTCTGGTGCGGTTTTAGACAGGCGGTGACGACAGACGCAACGGCAGCGGTGCGGTGGTTAAAAAATTGA Coding sequence (CDS) ATGATCCTGGGTCTAAAAAAACTTTGCCCCAATTTTTATCATCTTGATGATGAAGAAAATGAAAAGCACTCACCATTCCCAAGCAAAGGTACTTTACAGAAATACCAGCGGACATCACCACCATCGGAAGGACTCCTCGTCTGTGCAAGATACTTCTGCCTACCTTCGCAGTGCTCGATCACATCCTCCAATTTTGCAATGTTAGATGGCGTGTTTTTTAGTGAATCAGGGGACGCTTCTGGAACTTCAACAGAACCTATAGCTGCCGAAATCAACATGTCATCGCCACCCATATCTTTCGAACTATTTACATCCATTCCGCCGTCTGATAGAATAACTTTTGCCTCGGAACCTATCACTAAGAAAGAGGTTCCGAAGCAATTACAGGGCAGGTTAGCTCAGAAGATTGAGGAAGTTTTCTTCCGTCAAGAAAATCCTTCGACAACCCAGAAACACAACCACATAACAGCAATTTGGAATTGCGAAACGGAGTTTGGCTGGTGTGGTTTAAGAGCTTCGCTTCATCAAACACAATGTAGAAAGGCTGGAATGAGACCACGTCCAGTTCCAGATGGCTCCTGGCGAATACGGGAATCAATAGCCATTGAGATCATTGCAGTGCATGTTCGATCCAAGGGAATCGCGGAGAGAGCTTCGGTGGGGAGAAGGATGGCGGTGGGCTATGGCGGTGACTTCTGGTGCGGTTTTAGACAGGCGGTGACGACAGACGCAACGGCAGCGGTGCGGTGGTTAAAAAATTGA Protein sequence MILGLKKLCPNFYHLDDEENEKHSPFPSKGTLQKYQRTSPPSEGLLVCARYFCLPSQCSITSSNFAMLDGVFFSESGDASGTSTEPIAAEINMSSPPISFELFTSIPPSDRITFASEPITKKEVPKQLQGRLAQKIEEVFFRQENPSTTQKHNHITAIWNCETEFGWCGLRASLHQTQCRKAGMRPRPVPDGSWRIRESIAIEIIAVHVRSKGIAERASVGRRMAVGYGGDFWCGFRQAVTTDATAAVRWLKN
Homology
BLAST of HG10018595 vs. NCBI nr
Match: KAG7033418.1 (hypothetical protein SDJN02_07474, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198.4 bits (503), Expect = 7.6e-47 Identity = 101/122 (82.79%), Postives = 108/122 (88.52%), Query Frame = 0 Query: 15 LDDEENEKHSPFPSKGTLQKYQRTSPPSEGLLVCARYFCLPSQCSITSSNFAMLDGVFFS 74 + DE+NEK SPFPSKGTLQKYQRTSPPSEGLLVCARY CLPSQCS+TSSNFAML+GVFFS Sbjct: 117 IKDEKNEKRSPFPSKGTLQKYQRTSPPSEGLLVCARYLCLPSQCSMTSSNFAMLEGVFFS 176
Query: 75 ESGDASGTSTEPIAAEINMSSPPISFELFTSIPPSDRITFASEPITKKEVPKQLQGRLAQ 134 ESGDAS TS EPIAA+ NMS P ISFELFTS+ DRI FASEPITKKE PKQLQ RLAQ Sbjct: 177 ESGDASETSEEPIAAKDNMSPPTISFELFTSLLAPDRIIFASEPITKKEAPKQLQDRLAQ 236
Query: 135 KI 137 +I Sbjct: 237 RI 238
BLAST of HG10018595 vs. ExPASy TrEMBL
Match: A0A2P2MMV8 (Uncharacterized protein MANES_S009500 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.5e-08 Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0 Query: 39 SPPSEGLLVCARYFCLPSQCSITSSNFAMLDGVFFSESGDAS----GTSTE 86 SPPS+GLLVCARYF P CSITSSN AML GVFFS+SGD S G STE Sbjct: 2 SPPSDGLLVCARYFWRPLLCSITSSNLAMLVGVFFSKSGDVSSAMDGFSTE 52
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7033418.1 | 7.6e-47 | 82.79 | hypothetical protein SDJN02_07474, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P2MMV8 | 7.5e-08 | 72.55 | Uncharacterized protein MANES_S009500 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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